RNA–Protein interactions for RNA: ENST00000510871.5

RBM47-207, Transcript of RNA binding motif protein 47, humanhuman

TSL 1 (best)

Gene RBM47, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-207ENST00000510871 KHSRPQ92945 711 aaKnown RBP eCLIP13.2□□□□□ -0.3
RBM47-207ENST00000510871 LRCH3Q96II8 777 aa13.2□□□□□ -0.3
RBM47-207ENST00000510871 PCBD2Q9H0N5 130 aa13.2□□□□□ -0.3
RBM47-207ENST00000510871 ITM2CQ9NQX7 267 aa13.2□□□□□ -0.3
RBM47-207ENST00000510871 TOR4AQ9NXH8 423 aa13.2□□□□□ -0.3
RBM47-207ENST00000510871 TMEM9Q9P0T7 183 aa13.2□□□□□ -0.3
RBM47-207ENST00000510871 COLEC10Q9Y6Z7 277 aa13.2□□□□□ -0.3
RBM47-207ENST00000510871 MYOCOSA0A1B0GUC4 107 aa13.2□□□□□ -0.3
RBM47-207ENST00000510871 CD97P48960 835 aa13.2□□□□□ -0.3
RBM47-207ENST00000510871 CASP9P55211 416 aa13.2□□□□□ -0.3
RBM47-207ENST00000510871 IFI44LQ53G44 452 aa13.2□□□□□ -0.3
RBM47-207ENST00000510871 NCEH1Q6PIU2 408 aa13.2□□□□□ -0.3
RBM47-207ENST00000510871 Q6ZVL8 140 aa13.2□□□□□ -0.3
RBM47-207ENST00000510871 WDR36Q8NI36 951 aaKnown RBP13.2□□□□□ -0.3
RBM47-207ENST00000510871 ZNF420Q8TAQ5 688 aaPredicted RBP13.2□□□□□ -0.3
RBM47-207ENST00000510871 C12orf66Q96MD2 445 aa13.2□□□□□ -0.3
RBM47-207ENST00000510871 GINS4Q9BRT9 223 aa13.2□□□□□ -0.3
RBM47-207ENST00000510871 KLHL1Q9NR64 748 aa13.2□□□□□ -0.3
RBM47-207ENST00000510871 EXD2Q9NVH0 621 aa13.2□□□□□ -0.3
RBM47-207ENST00000510871 PITPNM1O00562 1244 aa13.2□□□□□ -0.3
RBM47-207ENST00000510871 CLCN4P51793 760 aa13.2□□□□□ -0.3
RBM47-207ENST00000510871 ITGA1P56199 1179 aa13.2□□□□□ -0.3
RBM47-207ENST00000510871 QPRTQ15274 297 aa13.2□□□□□ -0.3
RBM47-207ENST00000510871 AHSA2Q719I0 299 aa13.2□□□□□ -0.3
RBM47-207ENST00000510871 IRF7Q92985 503 aa13.2□□□□□ -0.3
RBM47-207ENST00000510871 ZUFSPQ96AP4 578 aa13.2□□□□□ -0.3
RBM47-207ENST00000510871 TLR9Q9NR96 1032 aa13.2□□□□□ -0.3
RBM47-207ENST00000510871 THSD7AQ9UPZ6 1657 aa13.2□□□□□ -0.3
RBM47-207ENST00000510871 WASH4PA8MWX3 477 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 GRID2O43424 1007 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 MAT2AP31153 395 aaKnown RBP13.19□□□□□ -0.3
RBM47-207ENST00000510871 SLC9A3P48764 834 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 PTSQ03393 145 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 OGFOD2Q6N063 350 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 AGTRAPQ6RW13 159 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 HDDC3Q8N4P3 179 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 KDM1BQ8NB78 822 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 TSPEARQ8WU66 669 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 ZNF641Q96N77 438 aaPredicted RBP13.19□□□□□ -0.3
RBM47-207ENST00000510871 XIRP1Q702N8 1843 aaKnown RBP13.19□□□□□ -0.3
RBM47-207ENST00000510871 FADS2P1A8MWK0 482 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 TMEM189-UBE2V1I3L0A0 370 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 SLC31A1O15431 190 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 NPPAP01160 153 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 ACRV1P26436 265 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 CMPK1P30085 196 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 PLA2G16P53816 162 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 PTPN5P54829 565 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 SPATS1Q496A3 300 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 ZNF544Q6NX49 715 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 P2RY8Q86VZ1 359 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 DNAJC15Q9Y5T4 150 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 NUDT14O95848 222 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 SH3BP2P78314 561 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 GPM6BQ13491 265 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 RUNDC3AQ59EK9 446 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.19□□□□□ -0.3
RBM47-207ENST00000510871 DPY19L3Q6ZPD9 716 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 FBXW2Q9UKT8 454 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 SPATA2Q9UM82 520 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 SPO11Q9Y5K1 396 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 A0A1W2PRB8 838 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 CLPXO76031 633 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 SP140Q13342 867 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 DUOXA1Q1HG43 343 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 NANOGP8Q6NSW7 305 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 RAB43Q86YS6 212 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 APCDD1Q8J025 514 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 L3HYPDHQ96EM0 354 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 MGME1Q9BQP7 344 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 YTHDF1Q9BYJ9 559 aaKnown RBP13.19□□□□□ -0.3
RBM47-207ENST00000510871 HDHD2Q9H0R4 259 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 CRISPLD1Q9H336 500 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 NANOGQ9H9S0 305 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 FZD4Q9ULV1 537 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.19□□□□□ -0.3
RBM47-207ENST00000510871 OR10H1Q9Y4A9 318 aa13.19□□□□□ -0.3
RBM47-207ENST00000510871 LOC110117498-PIK3R3F6TDL0 507 aa13.18□□□□□ -0.3
RBM47-207ENST00000510871 TFECO14948 347 aaPredicted RBP13.18□□□□□ -0.3
RBM47-207ENST00000510871 NDUFS2O75306 463 aa13.18□□□□□ -0.3
RBM47-207ENST00000510871 PDGFRLQ15198 375 aa13.18□□□□□ -0.3
RBM47-207ENST00000510871 SPIN4Q56A73 249 aa13.18□□□□□ -0.3
RBM47-207ENST00000510871 MZT2BQ6NZ67 158 aa13.18□□□□□ -0.3
RBM47-207ENST00000510871 LCN9Q8WX39 176 aa13.18□□□□□ -0.3
RBM47-207ENST00000510871 SCAMP4Q969E2 229 aa13.18□□□□□ -0.3
RBM47-207ENST00000510871 GJD2Q9UKL4 321 aa13.18□□□□□ -0.3
RBM47-207ENST00000510871 OARD1Q9Y530 152 aa13.18□□□□□ -0.3
RBM47-207ENST00000510871 DLEC1Q9Y238 1755 aa13.18□□□□□ -0.3
RBM47-207ENST00000510871 ZSCAN5BA6NJL1 495 aa13.18□□□□□ -0.3
RBM47-207ENST00000510871 PDPK1O15530 556 aa13.18□□□□□ -0.3
RBM47-207ENST00000510871 MMP20O60882 483 aa13.18□□□□□ -0.3
RBM47-207ENST00000510871 POP7O75817 140 aaKnown RBP13.18□□□□□ -0.3
RBM47-207ENST00000510871 LATS1O95835 1130 aa13.18□□□□□ -0.3
RBM47-207ENST00000510871 POU2F1P14859 743 aa13.18□□□□□ -0.3
RBM47-207ENST00000510871 CSF2RAP15509 400 aa13.18□□□□□ -0.3
RBM47-207ENST00000510871 BMP7P18075 431 aa13.18□□□□□ -0.3
RBM47-207ENST00000510871 HMGCLP35914 325 aa13.18□□□□□ -0.3
RBM47-207ENST00000510871 PPP1R8Q12972 351 aaKnown RBP13.18□□□□□ -0.3
RBM47-207ENST00000510871 DCST1Q5T197 706 aa13.18□□□□□ -0.3
RBM47-207ENST00000510871 SLC34A3Q8N130 599 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms