RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 CFAP97Q9P2B7 532 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 FKBPLQ9UIM3 349 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 ZNF223Q9UK11 482 aaPredicted RBP3.5□□□□□ -1.85
USP53-205ENST00000509769 ZNRF3Q9ULT6 936 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 NPIPA1Q9UND3 350 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 ZNF510Q9Y2H8 683 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 RIIAD1A6NNX1 92 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 IRF6O14896 467 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 NKRFO15226 690 aaKnown RBP eCLIP3.5□□□□□ -1.85
USP53-205ENST00000509769 CLDN3O15551 220 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 TXNL1O43396 289 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 TRAF3IP2O43734 574 aaPredicted RBP3.5□□□□□ -1.85
USP53-205ENST00000509769 BCAS1O75363 584 aaPredicted RBP3.5□□□□□ -1.85
USP53-205ENST00000509769 INMTO95050 263 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 SCGB1D1O95968 90 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 PLATP00750 562 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 FGBP02675 491 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 OPN1LWP04000 364 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 HOXD8P13378 290 aaPredicted RBP3.5□□□□□ -1.85
USP53-205ENST00000509769 PTNP21246 168 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 IVDP26440 423 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 RPL10P27635 214 aaKnown RBP3.5□□□□□ -1.85
USP53-205ENST00000509769 SERPINA4P29622 427 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 RBMXP38159 391 aaKnown RBP3.5□□□□□ -1.85
USP53-205ENST00000509769 PNPLA4P41247 253 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 GLP1RP43220 463 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 IDH2P48735 452 aaKnown RBP3.5□□□□□ -1.85
USP53-205ENST00000509769 HERVK_113P63132 956 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 CREB5Q02930 508 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 PPP3CAQ08209 521 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 POU4F2Q12837 409 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 TBX2Q13207 712 aaPredicted RBP3.5□□□□□ -1.85
USP53-205ENST00000509769 CAMK2DQ13557 499 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 MFSD10Q14728 455 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 NECTIN1Q15223 517 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 MAPKAPK3Q16644 382 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 DUSP7Q16829 419 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 MYLK3Q32MK0 819 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 AARDQ4LEZ3 155 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 CCDC184Q52MB2 194 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 EIPR1Q53HC9 387 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 PAN3Q58A45 887 aaKnown RBP3.5□□□□□ -1.85
USP53-205ENST00000509769 RNASE10Q5GAN6 216 aaKnown RBP3.5□□□□□ -1.85
USP53-205ENST00000509769 TEX30Q5JUR7 227 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 HYIQ5T013 277 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 ARHGAP40Q5TG30 622 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 ZDHHC20Q5W0Z9 365 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 CES4AQ5XG92 561 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 ANKRD54Q6NXT1 300 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 KCNV1Q6PIU1 500 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 GSG1LQ6UXU4 331 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 SCML4Q8N228 414 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 ARFGAP1Q8N6T3 406 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 ZNF565Q8N9K5 539 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 KIAA0895Q8NCT3 520 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 TMEM161BQ8NDZ6 487 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 SLC24A4Q8NFF2 622 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 OR2L3Q8NG85 312 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 OR4K1Q8NGD4 311 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 OR6S1Q8NH40 331 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 ELP5Q8TE02 316 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 SLC22A17Q8WUG5 538 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 GAB3Q8WWW8 586 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 SPOCK2Q92563 424 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 RBPMSQ93062 196 aaKnown RBP3.5□□□□□ -1.85
USP53-205ENST00000509769 MAL2Q969L2 176 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 MUL1Q969V5 352 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 SLC45A3Q96JT2 553 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 CCDC74BQ96LY2 380 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 GLT1D1Q96MS3 346 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 C17orf62Q9BQA9 187 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 C11orf70Q9BRQ4 267 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 ZNF577Q9BSK1 485 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 CHRDL1Q9BU40 450 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 MSTO1Q9BUK6 570 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 ASPNQ9BXN1 380 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 SAMD10Q9BYL1 202 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 ALG2Q9H553 416 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 C11orf49Q9H6J7 331 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 RNF121Q9H920 327 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 WDR6Q9NNW5 1121 aaKnown RBP3.5□□□□□ -1.85
USP53-205ENST00000509769 HOXC10Q9NYD6 342 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 ACSL6Q9UKU0 697 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 DERAQ9Y315 318 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 HEY1Q9Y5J3 304 aa3.5□□□□□ -1.85
USP53-205ENST00000509769 C4BP0C0L5 1744 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ASTN1O14525 1302 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 NCANO14594 1321 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 PNMA6EA0A0J9YXQ4 647 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 GXYLT2A0PJZ3 443 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 TVP23AA6NH52 213 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 SLC17A3O00476 420 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 CYB5AP00167 134 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 GH1P01241 217 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 LTA4HP09960 611 aaKnown RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 PRPS2P11908 318 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 IL7RP16871 459 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 SYN1P17600 705 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 MSX2P35548 267 aaPredicted RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 PTPN9P43378 593 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms