RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 FAM157CP0CG43 387 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 UCHL3P15374 230 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 CCNCP24863 283 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 PEBP1P30086 187 aaKnown RBP6.78□□□□□ -1.32
VCAN-207ENST00000507162 CD151P48509 253 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 ASCL1P50553 236 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 TAS2R50P59544 299 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 GPR85P60893 370 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 PPIAP62937 165 aaKnown RBP6.78□□□□□ -1.32
VCAN-207ENST00000507162 PLGLB1Q02325 96 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 ACTN3Q08043 901 aaPredicted RBP6.78□□□□□ -1.32
VCAN-207ENST00000507162 TNK1Q13470 666 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 ITGA9Q13797 1035 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 PKP1Q13835 747 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 KIR2DS3Q14952 304 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 IFI16Q16666 785 aaKnown RBP6.78□□□□□ -1.32
VCAN-207ENST00000507162 SYT16Q17RD7 645 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 MUM1Q2TAK8 710 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 BCL7AQ4VC05 210 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 PDLIM3Q53GG5 364 aaPredicted RBP6.78□□□□□ -1.32
VCAN-207ENST00000507162 FIGNQ5HY92 759 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 FKBP15Q5T1M5 1219 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 ZDHHC20Q5W0Z9 365 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 DPY19L2P1Q6NXN4 242 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 LANCL3Q6ZV70 420 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 CYP4V2Q6ZWL3 525 aaPredicted RBP6.78□□□□□ -1.32
VCAN-207ENST00000507162 MON1BQ7L1V2 547 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 TAX1BP1Q86VP1 789 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 KIF18BQ86Y91 864 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 PSTKQ8IV42 348 aaKnown RBP6.78□□□□□ -1.32
VCAN-207ENST00000507162 OR4N4Q8N0Y3 316 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 PPM1NQ8N819 430 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 CCNYQ8ND76 341 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 CREB3L4Q8TEY5 395 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 MMABQ96EY8 250 aaPredicted RBP6.78□□□□□ -1.32
VCAN-207ENST00000507162 CABS1Q96KC9 395 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 LINC00615Q96LM1 132 aaPredicted RBP6.78□□□□□ -1.32
VCAN-207ENST00000507162 TRIB3Q96RU7 358 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 SMC6Q96SB8 1091 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 CYTH2Q99418 400 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 ZFYVE21Q9BQ24 234 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 CNPPD1Q9BV87 410 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 COG4Q9H9E3 785 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 UBTD1Q9HAC8 227 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 INTS7Q9NVH2 962 aaKnown RBP6.78□□□□□ -1.32
VCAN-207ENST00000507162 C14orf105Q9NVL8 296 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.78□□□□□ -1.32
VCAN-207ENST00000507162 OR6C2Q9NZP2 312 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 B4GALT7Q9UBV7 327 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 MTRF1LQ9UGC7 380 aaKnown RBP6.78□□□□□ -1.32
VCAN-207ENST00000507162 AMACRQ9UHK6 382 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 CDC42EP3Q9UKI2 254 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 CDC14AQ9UNH5 594 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 EIF3LQ9Y262 564 aaKnown RBP6.78□□□□□ -1.32
VCAN-207ENST00000507162 KLF13Q9Y2Y9 288 aaPredicted RBP6.78□□□□□ -1.32
VCAN-207ENST00000507162 FITM1A5D6W6 292 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 OR2W5A6NFC9 320 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 FAM166BA8MTA8 275 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 FAM47E-STBD1D6RA91 191 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 BCKDKO14874 412 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 TLX2O43763 284 aaPredicted RBP6.77□□□□□ -1.33
VCAN-207ENST00000507162 SRPX2O60687 465 aaPredicted RBP6.77□□□□□ -1.33
VCAN-207ENST00000507162 ANXA5P08758 320 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 TPBGLP0DKB5 382 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 ERVK-10P10266 1014 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 RALBP11234 206 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 TPH1P17752 444 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 HMGCLP35914 325 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 ITGA8P53708 1063 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 AP1B1Q10567 949 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 MAMLD1Q13495 774 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 PTPRCAPQ14761 206 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 BRD3Q15059 726 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 NOMO1Q15155 1222 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 SF1Q15637 639 aaKnown RBP6.77□□□□□ -1.33
VCAN-207ENST00000507162 DPYSL2Q16555 572 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 CCDC38Q502W7 563 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 C1orf185Q5T7R7 199 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 HIST2H2BDQ6DRA6 164 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 FRMPD2BQ6IN97 320 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 RPS19BP1Q86WX3 136 aaKnown RBP6.77□□□□□ -1.33
VCAN-207ENST00000507162 RELL2Q8NC24 303 aaPredicted RBP6.77□□□□□ -1.33
VCAN-207ENST00000507162 C16orf52Q8NHV5 167 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 M1APQ8TC57 530 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 SRPK1Q96SB4 655 aaKnown RBP6.77□□□□□ -1.33
VCAN-207ENST00000507162 SH3GL2Q99962 352 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 BEX2Q9BXY8 128 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 MKKSQ9NPJ1 570 aaPredicted RBP6.77□□□□□ -1.33
VCAN-207ENST00000507162 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.77□□□□□ -1.33
VCAN-207ENST00000507162 POLG2Q9UHN1 485 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 HOOK1Q9UJC3 728 aaKnown RBP6.77□□□□□ -1.33
VCAN-207ENST00000507162 PKP3Q9Y446 797 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 TENM1Q9UKZ4 2725 aa6.77□□□□□ -1.33
VCAN-207ENST00000507162 SOWAHDA6NJG2 315 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 HSPB2A8KAH6 182 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 A8MV72 311 aaPredicted RBP6.76□□□□□ -1.33
VCAN-207ENST00000507162 KCNK1O00180 336 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 PRPF4O43172 522 aaKnown RBP eCLIP6.76□□□□□ -1.33
VCAN-207ENST00000507162 SGTAO43765 313 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 MFSD11O43934 449 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms