RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 RELAQ04206 551 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 PCDH1Q08174 1060 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 KCNAB1Q14722 419 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 RTP5Q14D33 572 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 LRRC70Q7Z2Q7 622 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 PAQR7Q86WK9 346 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 C17orf64Q86WR6 236 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 DNAJC22Q8N4W6 341 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 PTGR2Q8N8N7 351 aaPredicted RBP12.34□□□□□ -0.43
TCOF1-210ENST00000506767 ABHD11Q8NFV4 315 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 OR4K1Q8NGD4 311 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 RDH11Q8TC12 318 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 TCP10LQ8TDR4 215 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 NEIL2Q969S2 332 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 PHF21BQ96EK2 531 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 PKNOX2Q96KN3 472 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 SH3GL2Q99962 352 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 PLCD4Q9BRC7 762 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 C1QTNF3Q9BXJ4 246 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 STMN4Q9H169 189 aaPredicted RBP12.34□□□□□ -0.43
TCOF1-210ENST00000506767 PDE7BQ9NP56 450 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 FBXO8Q9NRD0 319 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 TMEM184CQ9NVA4 438 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 DNAJC11Q9NVH1 559 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 CUEDC1Q9NWM3 386 aaPredicted RBP12.34□□□□□ -0.43
TCOF1-210ENST00000506767 ZNF446Q9NWS9 450 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 GPRC5BQ9NZH0 403 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 AKAP7Q9P0M2 348 aaPredicted RBP12.34□□□□□ -0.43
TCOF1-210ENST00000506767 PILRAQ9UKJ1 303 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 SNX7Q9UNH6 387 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 SATB2Q9UPW6 733 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 MSRB2Q9Y3D2 182 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 TNPO3Q9Y5L0 923 aaKnown RBP12.34□□□□□ -0.43
TCOF1-210ENST00000506767 KCNE2Q9Y6J6 123 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 ACACBO00763 2458 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 KIF26BQ2KJY2 2108 aa12.34□□□□□ -0.43
TCOF1-210ENST00000506767 LRRC14BA6NHZ5 514 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 GOLGA6L10A6NI86 522 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 H7BY64 318 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 K7EPI3 171 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 E2F3O00716 465 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 HCRTR1O43613 425 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 NRP2O60462 931 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 CCNT2O60583 730 aaKnown RBP12.33□□□□□ -0.44
TCOF1-210ENST00000506767 CTSVO60911 334 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 SIX3O95343 332 aaPredicted RBP12.33□□□□□ -0.44
TCOF1-210ENST00000506767 EBLN1P0CF75 366 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 CDH1P12830 882 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 HGFP14210 728 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 EPORP19235 508 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 ITIH1P19827 911 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 SPINK2P20155 84 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 TAC1P20366 129 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 ETV5P41161 510 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 ARL4DP49703 201 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 CSNK1G2P78368 415 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 ACY1Q03154 408 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 CDC16Q13042 620 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 E2F2Q14209 437 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 C3orf38Q5JPI3 329 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 TMTC4Q5T4D3 741 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 AGBL2Q5U5Z8 902 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 FBXO42Q6P3S6 717 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 IGF2-ASQ6U949 168 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 ZYG11AQ6WRX3 759 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 FAM129CQ86XR2 697 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 SLC5A11Q8WWX8 675 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 ARL8AQ96BM9 186 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 ZNF501Q96CX3 271 aaPredicted RBP12.33□□□□□ -0.44
TCOF1-210ENST00000506767 PRAP1Q96NZ9 151 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 SARGQ9BW04 601 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 CAPS2Q9BXY5 557 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 B3GNT4Q9C0J1 378 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 POLR1BQ9H9Y6 1135 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 ENAMQ9NRM1 1142 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 SOHLH2Q9NX45 425 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 SLC17A7Q9P2U7 560 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 OPTCQ9UBM4 332 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 ANGPTL2Q9UKU9 493 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 DYRK1BQ9Y463 629 aa12.33□□□□□ -0.44
TCOF1-210ENST00000506767 H3BMH7 237 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 AGRPO00253 132 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 PRPF4O43172 522 aaKnown RBP eCLIP12.32□□□□□ -0.44
TCOF1-210ENST00000506767 MAP3K7O43318 606 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 PRAMEF4O60810 478 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 RPS17P08708 135 aaKnown RBP12.32□□□□□ -0.44
TCOF1-210ENST00000506767 FGF5P12034 268 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 GNAZP19086 355 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 IMPDH1P20839 514 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 EEF1DP29692 281 aaKnown RBP12.32□□□□□ -0.44
TCOF1-210ENST00000506767 MLLT3P42568 568 aaPredicted RBP12.32□□□□□ -0.44
TCOF1-210ENST00000506767 ETV4P43268 484 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 PRKAA2P54646 552 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 IL11RAQ14626 422 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 GPR19Q15760 415 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 PDK4Q16654 411 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 ST3GAL2Q16842 350 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 ZC3H12BQ5HYM0 836 aaKnown RBP12.32□□□□□ -0.44
TCOF1-210ENST00000506767 CATSPEREQ5SY80 951 aa12.32□□□□□ -0.44
TCOF1-210ENST00000506767 PRAMEF9Q5VWM5 478 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms