RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 ARHGAP19Q14CB8 494 aa21.06■□□□□ 0.96
LSM6-203ENST00000503982 MUM1Q2TAK8 710 aa21.06■□□□□ 0.96
LSM6-203ENST00000503982 FHL5Q5TD97 284 aa21.06■□□□□ 0.96
LSM6-203ENST00000503982 RNF44Q7L0R7 432 aa21.06■□□□□ 0.96
LSM6-203ENST00000503982 KCNMB4Q86W47 210 aa21.06■□□□□ 0.96
LSM6-203ENST00000503982 LMNTD2Q8IXW0 634 aa21.06■□□□□ 0.96
LSM6-203ENST00000503982 INPP5DQ92835 1189 aa21.06■□□□□ 0.96
LSM6-203ENST00000503982 RERGQ96A58 199 aaPredicted RBP21.06■□□□□ 0.96
LSM6-203ENST00000503982 MIEF2Q96C03 454 aa21.06■□□□□ 0.96
LSM6-203ENST00000503982 CRB3Q9BUF7 120 aa21.06■□□□□ 0.96
LSM6-203ENST00000503982 PTPN13Q12923 2485 aa21.06■□□□□ 0.96
LSM6-203ENST00000503982 OR2A25A4D2G3 310 aa21.05■□□□□ 0.96
LSM6-203ENST00000503982 H0YGG7 62 aa21.05■□□□□ 0.96
LSM6-203ENST00000503982 AGFG2O95081 481 aa21.05■□□□□ 0.96
LSM6-203ENST00000503982 MPC1LP0DKB6 136 aa21.05■□□□□ 0.96
LSM6-203ENST00000503982 VARSP26640 1264 aaKnown RBP21.05■□□□□ 0.96
LSM6-203ENST00000503982 ARF3P61204 181 aaPredicted RBP21.05■□□□□ 0.96
LSM6-203ENST00000503982 TUBB8Q3ZCM7 444 aa21.05■□□□□ 0.96
LSM6-203ENST00000503982 HSP90AA5PQ58FG0 334 aa21.05■□□□□ 0.96
LSM6-203ENST00000503982 ICE2Q659A1 982 aa21.05■□□□□ 0.96
LSM6-203ENST00000503982 PRMT9Q6P2P2 845 aa21.05■□□□□ 0.96
LSM6-203ENST00000503982 ZNF549Q6P9A3 640 aa21.05■□□□□ 0.96
LSM6-203ENST00000503982 NEK10Q6ZWH5 1172 aa21.05■□□□□ 0.96
LSM6-203ENST00000503982 UBE2R2Q712K3 238 aaPredicted RBP21.05■□□□□ 0.96
LSM6-203ENST00000503982 PARP9Q8IXQ6 854 aa21.05■□□□□ 0.96
LSM6-203ENST00000503982 CPNE9Q8IYJ1 553 aa21.05■□□□□ 0.96
LSM6-203ENST00000503982 IQCKQ8N0W5 287 aa21.05■□□□□ 0.96
LSM6-203ENST00000503982 NAT8LQ8N9F0 302 aa21.05■□□□□ 0.96
LSM6-203ENST00000503982 KCNJ9Q92806 393 aa21.05■□□□□ 0.96
LSM6-203ENST00000503982 ZNF285Q96NJ3 590 aa21.05■□□□□ 0.96
LSM6-203ENST00000503982 SPSB2Q99619 263 aa21.05■□□□□ 0.96
LSM6-203ENST00000503982 PLCD4Q9BRC7 762 aa21.05■□□□□ 0.96
LSM6-203ENST00000503982 SLC26A1Q9H2B4 701 aa21.05■□□□□ 0.96
LSM6-203ENST00000503982 ZNF552Q9H707 407 aaPredicted RBP21.05■□□□□ 0.96
LSM6-203ENST00000503982 TRMT6Q9UJA5 497 aaKnown RBP21.05■□□□□ 0.96
LSM6-203ENST00000503982 FBXO5Q9UKT4 447 aa21.05■□□□□ 0.96
LSM6-203ENST00000503982 COMMD10Q9Y6G5 202 aa21.05■□□□□ 0.96
LSM6-203ENST00000503982 RP1L1Q8IWN7 2480 aaPredicted RBP21.05■□□□□ 0.96
LSM6-203ENST00000503982 DOCK10Q96BY6 2186 aa21.04■□□□□ 0.96
LSM6-203ENST00000503982 SHANK1Q9Y566 2161 aa21.04■□□□□ 0.96
LSM6-203ENST00000503982 SMAPO00193 183 aa21.04■□□□□ 0.96
LSM6-203ENST00000503982 UQCRHP07919 91 aa21.04■□□□□ 0.96
LSM6-203ENST00000503982 ENO3P13929 434 aaPredicted RBP21.04■□□□□ 0.96
LSM6-203ENST00000503982 GLRBP48167 497 aa21.04■□□□□ 0.96
LSM6-203ENST00000503982 PTK6Q13882 451 aa21.04■□□□□ 0.96
LSM6-203ENST00000503982 PRAMEF13Q5VWM6 474 aa21.04■□□□□ 0.96
LSM6-203ENST00000503982 UGT3A1Q6NUS8 523 aa21.04■□□□□ 0.96
LSM6-203ENST00000503982 SYDE1Q6ZW31 735 aaPredicted RBP21.04■□□□□ 0.96
LSM6-203ENST00000503982 SPNS2Q8IVW8 549 aa21.04■□□□□ 0.96
LSM6-203ENST00000503982 PALM2Q8IXS6 379 aa21.04■□□□□ 0.96
LSM6-203ENST00000503982 CSNK1A1LQ8N752 337 aa21.04■□□□□ 0.96
LSM6-203ENST00000503982 GIMAP7Q8NHV1 300 aa21.04■□□□□ 0.96
LSM6-203ENST00000503982 CAPZA3Q96KX2 299 aa21.04■□□□□ 0.96
LSM6-203ENST00000503982 SIGLEC10Q96LC7 697 aa21.04■□□□□ 0.96
LSM6-203ENST00000503982 SEMA3GQ9NS98 782 aa21.04■□□□□ 0.96
LSM6-203ENST00000503982 ZNF282Q9UDV7 671 aaPredicted RBP21.04■□□□□ 0.96
LSM6-203ENST00000503982 B3GNT3Q9Y2A9 372 aa21.04■□□□□ 0.96
LSM6-203ENST00000503982 DHRS7Q9Y394 339 aa21.04■□□□□ 0.96
LSM6-203ENST00000503982 KLK4Q9Y5K2 254 aa21.04■□□□□ 0.96
LSM6-203ENST00000503982 SPENQ96T58 3664 aaKnown RBP21.03■□□□□ 0.96
LSM6-203ENST00000503982 BLACEA4D250 179 aa21.03■□□□□ 0.96
LSM6-203ENST00000503982 SOCS6O14544 535 aa21.03■□□□□ 0.96
LSM6-203ENST00000503982 MAP2K7O14733 419 aa21.03■□□□□ 0.96
LSM6-203ENST00000503982 PRPF4O43172 522 aaKnown RBP eCLIP21.03■□□□□ 0.96
LSM6-203ENST00000503982 HAUS5O94927 633 aa21.03■□□□□ 0.96
LSM6-203ENST00000503982 SLC16A8O95907 504 aa21.03■□□□□ 0.96
LSM6-203ENST00000503982 ANXA5P08758 320 aa21.03■□□□□ 0.96
LSM6-203ENST00000503982 ERGP11308 486 aa21.03■□□□□ 0.96
LSM6-203ENST00000503982 PGAM1P18669 254 aa21.03■□□□□ 0.96
LSM6-203ENST00000503982 CARSP49589 748 aaKnown RBP21.03■□□□□ 0.96
LSM6-203ENST00000503982 ESPL1Q14674 2120 aa21.03■□□□□ 0.96
LSM6-203ENST00000503982 PLEKHN1Q494U1 663 aaPredicted RBP21.03■□□□□ 0.96
LSM6-203ENST00000503982 FBXO42Q6P3S6 717 aa21.03■□□□□ 0.96
LSM6-203ENST00000503982 PAQR7Q86WK9 346 aa21.03■□□□□ 0.96
LSM6-203ENST00000503982 Q8NA96 180 aa21.03■□□□□ 0.96
LSM6-203ENST00000503982 STT3BQ8TCJ2 826 aa21.03■□□□□ 0.96
LSM6-203ENST00000503982 ZNF480Q8WV37 535 aa21.03■□□□□ 0.96
LSM6-203ENST00000503982 NACC2Q96BF6 587 aa21.03■□□□□ 0.96
LSM6-203ENST00000503982 AARSD1Q9BTE6 412 aaKnown RBP21.03■□□□□ 0.96
LSM6-203ENST00000503982 LRRC4CQ9HCJ2 640 aa21.03■□□□□ 0.96
LSM6-203ENST00000503982 KLHL42Q9P2K6 505 aa21.03■□□□□ 0.96
LSM6-203ENST00000503982 CDC14AQ9UNH5 594 aa21.03■□□□□ 0.96
LSM6-203ENST00000503982 HS3ST3B1Q9Y662 390 aa21.03■□□□□ 0.96
LSM6-203ENST00000503982 COL12A1Q99715 3063 aa21.03■□□□□ 0.96
LSM6-203ENST00000503982 PABPN1LA6NDY0 278 aaKnown RBP21.02■□□□□ 0.96
LSM6-203ENST00000503982 DNALI1O14645 258 aaPredicted RBP21.02■□□□□ 0.96
LSM6-203ENST00000503982 MED26O95402 600 aa21.02■□□□□ 0.96
LSM6-203ENST00000503982 ZGLP1P0C6A0 271 aa21.02■□□□□ 0.96
LSM6-203ENST00000503982 RGS4P49798 205 aa21.02■□□□□ 0.96
LSM6-203ENST00000503982 PRDX1Q06830 199 aaKnown RBP21.02■□□□□ 0.96
LSM6-203ENST00000503982 KLC1Q07866 573 aa21.02■□□□□ 0.96
LSM6-203ENST00000503982 SRSF1Q07955 248 aaKnown RBP eCLIP21.02■□□□□ 0.96
LSM6-203ENST00000503982 DHX9Q08211 1270 aaKnown RBP21.02■□□□□ 0.96
LSM6-203ENST00000503982 BBS9Q3SYG4 887 aa21.02■□□□□ 0.96
LSM6-203ENST00000503982 RNASEH2BQ5TBB1 312 aaKnown RBP21.02■□□□□ 0.96
LSM6-203ENST00000503982 PIWIL4Q7Z3Z4 852 aaKnown RBP21.02■□□□□ 0.96
LSM6-203ENST00000503982 PCGF5Q86SE9 256 aa21.02■□□□□ 0.96
LSM6-203ENST00000503982 AGGF1Q8N302 714 aaeCLIP21.02■□□□□ 0.96
LSM6-203ENST00000503982 CISD2Q8N5K1 135 aaKnown RBP21.02■□□□□ 0.96
LSM6-203ENST00000503982 CD200R1Q8TD46 325 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms