RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 GSTM4Q03013 218 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 EIF4HQ15056 248 aaKnown RBP11.24□□□□□ -0.61
USP46-204ENST00000503060 CPSF6Q16630 551 aaKnown RBP eCLIP11.24□□□□□ -0.61
USP46-204ENST00000503060 IRAK1BP1Q5VVH5 260 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 LCN8Q6JVE9 175 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 PLEKHM3Q6ZWE6 761 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 AQP12AQ8IXF9 295 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 FAM20CQ8IXL6 584 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 ANKRD53Q8N9V6 530 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 TMIEQ8NEW7 156 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 ST13P5Q8NFI4 369 aaPredicted RBP11.24□□□□□ -0.61
USP46-204ENST00000503060 FBXO30Q8TB52 745 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 PIP4K2CQ8TBX8 421 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 FBXL8Q96CD0 374 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 DTD2Q96FN9 168 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 UHRF1Q96T88 793 aaPredicted RBP11.24□□□□□ -0.61
USP46-204ENST00000503060 DNAJC11Q9NVH1 559 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 INTS7Q9NVH2 962 aaKnown RBP11.24□□□□□ -0.61
USP46-204ENST00000503060 ASIC5Q9NY37 505 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 ACTR3BQ9P1U1 418 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 FAM8A1Q9UBU6 413 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 EGFL7Q9UHF1 273 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 YBX2Q9Y2T7 364 aaKnown RBP11.24□□□□□ -0.61
USP46-204ENST00000503060 C15orf38-AP3S2A0A0A6YYH1 394 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 A0A0G2JPF8 293 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 ARHGAP10A1A4S6 786 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 KRT87PA6NCN2 255 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 HNRNPCL3B7ZW38 293 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 H0Y858 1186 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 INPP4BO15327 924 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 ATG13O75143 517 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 SEC22BO75396 215 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 HNRNPCL4P0DMR1 293 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 PRLHRP49683 370 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 DGKQP52824 942 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 LIPEQ05469 1076 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 TMEM115Q12893 351 aaPredicted RBP11.24□□□□□ -0.61
USP46-204ENST00000503060 SQSTM1Q13501 440 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 KIAA0040Q15053 153 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 SYTL3Q4VX76 610 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 NANOGP8Q6NSW7 305 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 CYP2U1Q7Z449 544 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 ARPINQ7Z6K5 226 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 L3MBTL4Q8NA19 623 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 NUDT8Q8WV74 236 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 LRTOMTQ8WZ04 291 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 LZICQ8WZA0 190 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 PYCR2Q96C36 320 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 MTFMTQ96DP5 389 aaKnown RBP11.24□□□□□ -0.61
USP46-204ENST00000503060 ARL5BQ96KC2 179 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 ZBTB18Q99592 522 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 EFHD1Q9BUP0 239 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 MUC13Q9H3R2 512 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 NANOGQ9H9S0 305 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 TRPV4Q9HBA0 871 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 NEUROD4Q9HD90 331 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 SCOCQ9UIL1 159 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 CNOT6Q9ULM6 557 aaKnown RBP11.24□□□□□ -0.61
USP46-204ENST00000503060 SATB2Q9UPW6 733 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 MUC22E2RYF6 1773 aaPredicted RBP11.23□□□□□ -0.61
USP46-204ENST00000503060 RNASEH1O60930 286 aaKnown RBP11.23□□□□□ -0.61
USP46-204ENST00000503060 PSIP1O75475 530 aaKnown RBP11.23□□□□□ -0.61
USP46-204ENST00000503060 PDYNP01213 254 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 LYNP07948 512 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 ITPKAP23677 461 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 TUBA4AP68366 448 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 ABRQ12979 859 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 MED21Q13503 144 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 KCNC3Q14003 757 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 PTGR1Q14914 329 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 PDGFRLQ15198 375 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 AAK1Q2M2I8 961 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 SLC44A4Q53GD3 710 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 CACHD1Q5VU97 1274 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 SLC30A9Q6PML9 568 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 TMEM220Q6QAJ8 160 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 DLEU7Q6UYE1 221 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 PRR23BQ6ZRT6 265 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 LIX1Q8N485 282 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 CANT1Q8WVQ1 401 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 SELENOMQ8WWX9 145 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 TMEM159Q96B96 161 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 TMEM74Q96NL1 305 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 CCM2Q9BSQ5 444 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 ACPTQ9BZG2 426 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 VCXQ9H320 206 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 ZFP14Q9HCL3 533 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 C1orf109Q9NX04 203 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 DLGAP2Q9P1A6 1054 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 SNX6Q9UNH7 406 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 DMTF1Q9Y222 760 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 SLC22A14Q9Y267 594 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 COQ6Q9Y2Z9 468 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 C2orf16Q68DN1 1984 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 SLC5A10A0PJK1 596 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 ARHGEF33A8MVX0 844 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 ARPC2O15144 300 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 ALAS2P22557 587 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 MAP4P27816 1152 aaKnown RBP11.23□□□□□ -0.61
USP46-204ENST00000503060 PREPP48147 710 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms