RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 ZNF514Q96K75 400 aaPredicted RBP11.62□□□□□ -0.55
NUP54-202ENST00000502850 APOLD1Q96LR9 279 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 TUBA1CQ9BQE3 449 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 ING2Q9H160 280 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 NTN4Q9HB63 628 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 SPATA6Q9NWH7 488 aaPredicted RBP11.62□□□□□ -0.55
NUP54-202ENST00000502850 STOX2Q9P2F5 926 aaPredicted RBP11.62□□□□□ -0.55
NUP54-202ENST00000502850 C3orf18Q9UK00 162 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 RPS6KA6Q9UK32 745 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 BLOC1S6Q9UL45 172 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 WNT6Q9Y6F9 365 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 SLC5A10A0PJK1 596 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 EME2A4GXA9 379 aaPredicted RBP11.61□□□□□ -0.55
NUP54-202ENST00000502850 FADS2P1A8MWK0 482 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 UPK1AO00322 258 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 RFPL2O75678 378 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 SNAP29O95721 258 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 GNAO1P09471 354 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 HPCAL1P37235 193 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 RPL3P39023 403 aaKnown RBP11.61□□□□□ -0.55
NUP54-202ENST00000502850 HLCSP50747 726 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 RAD23AP54725 363 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 ACSM2AQ08AH3 577 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 TOP3AQ13472 1001 aaPredicted RBP11.61□□□□□ -0.55
NUP54-202ENST00000502850 IL18R1Q13478 541 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 GTF2H3Q13889 308 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 EIF4HQ15056 248 aaKnown RBP11.61□□□□□ -0.55
NUP54-202ENST00000502850 ACOX1Q15067 660 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 PON2Q15165 354 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 DHCR24Q15392 516 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 OTUD3Q5T2D3 398 aaPredicted RBP11.61□□□□□ -0.55
NUP54-202ENST00000502850 PPP2R2DQ66LE6 453 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 ACSM2BQ68CK6 577 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 TMEM215Q68D42 235 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 C8orf59Q8N0T1 100 aaPredicted RBP11.61□□□□□ -0.55
NUP54-202ENST00000502850 PJA1Q8NG27 643 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 OR56A3Q8NH54 315 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 WDR20Q8TBZ3 569 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 CYB5D2Q8WUJ1 264 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 PYCR2Q96C36 320 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 APIPQ96GX9 242 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 PYURFQ96I23 114 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 PPP1R16AQ96I34 528 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 FBXL20Q96IG2 436 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 CNDP2Q96KP4 475 aaKnown RBP11.61□□□□□ -0.55
NUP54-202ENST00000502850 TBCDQ9BTW9 1192 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 ATG10Q9H0Y0 220 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 LINC00597Q9H2U6 94 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 HPS4Q9NQG7 708 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 KCNE2Q9Y6J6 123 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 CROCCQ5TZA2 2017 aa11.61□□□□□ -0.55
NUP54-202ENST00000502850 OR2AG2A6NM03 316 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 AREL1O15033 823 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 TSPAN6O43657 245 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 NOL3O60936 208 aaKnown RBP11.6□□□□□ -0.55
NUP54-202ENST00000502850 MTX2O75431 263 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 TRMUO75648 421 aaKnown RBP11.6□□□□□ -0.55
NUP54-202ENST00000502850 PRKD3O94806 890 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 MT-ND1P03886 318 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 COX7A2P14406 83 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 NELFEP18615 380 aaKnown RBP11.6□□□□□ -0.55
NUP54-202ENST00000502850 ITGB7P26010 798 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 RXRGP48443 463 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 GZMMP51124 257 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 NEK2P51955 445 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 ARHGDIAP52565 204 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 TPD52P55327 224 aaPredicted RBP11.6□□□□□ -0.55
NUP54-202ENST00000502850 TMEM115Q12893 351 aaPredicted RBP11.6□□□□□ -0.55
NUP54-202ENST00000502850 E2F2Q14209 437 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 AAK1Q2M2I8 961 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 ZXDCQ2QGD7 858 aaPredicted RBP11.6□□□□□ -0.55
NUP54-202ENST00000502850 PAGE2BQ5JRK9 111 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 ANXA8L1Q5VT79 327 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 AP1ARQ63HQ0 302 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 PDE12Q6L8Q7 609 aaKnown RBP11.6□□□□□ -0.55
NUP54-202ENST00000502850 LIPIQ6XZB0 460 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 RASGEF1AQ8N9B8 481 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 TMIEQ8NEW7 156 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 NRBF2Q96F24 287 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 DTD2Q96FN9 168 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 PANX1Q96RD7 426 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 IKZF5Q9H5V7 419 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 PPT2Q9UMR5 302 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 MRPS23Q9Y3D9 190 aaKnown RBP11.6□□□□□ -0.55
NUP54-202ENST00000502850 EDDM13A0A1B0GTR0 161 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 MAGEB17A8MXT2 336 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 H3BM21 787 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 FPGTO14772 594 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 TLL1O43897 1013 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 E2F6O75461 281 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 SEC24DO94855 1032 aaPredicted RBP11.6□□□□□ -0.55
NUP54-202ENST00000502850 NFATC1O95644 943 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 SERPINA1P01009 418 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 CYP17A1P05093 508 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 CTSLP07711 333 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 IGFBP4P22692 258 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 PTPN6P29350 595 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 MAGEA2P43356 314 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 NUP107P57740 925 aa11.6□□□□□ -0.55
NUP54-202ENST00000502850 GABARAPL2P60520 117 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms