RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 LCN1P1Q5VSP4 162 aa4.26□□□□□ -1.73
VPS36-206ENST00000497149 ZNF790Q6PG37 636 aa4.26□□□□□ -1.73
VPS36-206ENST00000497149 TMEM182Q6ZP80 229 aaPredicted RBP4.26□□□□□ -1.73
VPS36-206ENST00000497149 Q6ZTC4 211 aa4.26□□□□□ -1.73
VPS36-206ENST00000497149 G2E3Q7L622 706 aa4.26□□□□□ -1.73
VPS36-206ENST00000497149 AMIGO1Q86WK6 493 aa4.26□□□□□ -1.73
VPS36-206ENST00000497149 SUSD6Q92537 303 aa4.26□□□□□ -1.73
VPS36-206ENST00000497149 DYRK2Q92630 601 aa4.26□□□□□ -1.73
VPS36-206ENST00000497149 CORO2AQ92828 525 aa4.26□□□□□ -1.73
VPS36-206ENST00000497149 PGM2Q96G03 612 aa4.26□□□□□ -1.73
VPS36-206ENST00000497149 PRAC1Q96KF2 57 aa4.26□□□□□ -1.73
VPS36-206ENST00000497149 ZNF696Q9H7X3 374 aa4.26□□□□□ -1.73
VPS36-206ENST00000497149 PPANQ9NQ55 473 aaKnown RBP4.26□□□□□ -1.73
VPS36-206ENST00000497149 INTS10Q9NVR2 710 aaKnown RBP4.26□□□□□ -1.73
VPS36-206ENST00000497149 R4GN57 208 aa4.26□□□□□ -1.73
VPS36-206ENST00000497149 IGHV4-4A0A075B6R2 117 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 PSMD14O00487 310 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 LINC01565O15544 149 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 FCGR3BO75015 233 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 CDC123O75794 336 aaPredicted RBP4.25□□□□□ -1.73
VPS36-206ENST00000497149 PGLSO95336 258 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 RPN1P04843 607 aaKnown RBP4.25□□□□□ -1.73
VPS36-206ENST00000497149 HMBSP08397 361 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 EPORP19235 508 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 PSMB4P28070 264 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 ALDH1B1P30837 517 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 TIA1P31483 386 aaKnown RBP eCLIP4.25□□□□□ -1.73
VPS36-206ENST00000497149 CDX1P47902 265 aaPredicted RBP4.25□□□□□ -1.73
VPS36-206ENST00000497149 SP3Q02447 781 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 CACNG1Q06432 222 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 CDO1Q16878 200 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 GPR33Q49SQ1 333 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 ZRANB3Q5FWF4 1079 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 SPOUT1Q5T280 376 aaKnown RBP4.25□□□□□ -1.73
VPS36-206ENST00000497149 LYSMD4Q5XG99 296 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 NOTUMQ6P988 496 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 PSRC1Q6PGN9 363 aaPredicted RBP4.25□□□□□ -1.73
VPS36-206ENST00000497149 TMEM207Q6UWW9 146 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 MSANTD1Q6ZTZ1 278 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 ANKRD33Q7Z3H0 272 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 DZIP1Q86YF9 867 aaKnown RBP4.25□□□□□ -1.73
VPS36-206ENST00000497149 APCDD1Q8J025 514 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 KLHDC1Q8N7A1 406 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 TMEM178AQ8NBL3 297 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 SEPT1Q8WYJ6 367 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 P2RX5Q93086 422 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 MR1Q95460 341 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 EXOC4Q96A65 974 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 LRR1Q96L50 414 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 C4orf45Q96LM5 186 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 LITAFQ99732 161 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 FAM49AQ9H0Q0 323 aaPredicted RBP4.25□□□□□ -1.73
VPS36-206ENST00000497149 SDCBP2Q9H190 292 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 LMAN1LQ9HAT1 526 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 PKD2L2Q9NZM6 624 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 OR6C2Q9NZP2 312 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 DNAJB9Q9UBS3 223 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 C19orf25Q9UFG5 118 aaPredicted RBP4.25□□□□□ -1.73
VPS36-206ENST00000497149 MAN1B1Q9UKM7 699 aa4.25□□□□□ -1.73
VPS36-206ENST00000497149 ARID2Q68CP9 1835 aa4.24□□□□□ -1.73
VPS36-206ENST00000497149 C2CD4DB7Z1M9 353 aa4.24□□□□□ -1.73
VPS36-206ENST00000497149 IFIT3O14879 490 aaKnown RBP4.24□□□□□ -1.73
VPS36-206ENST00000497149 RAF1P04049 648 aa4.24□□□□□ -1.73
VPS36-206ENST00000497149 CEBPBP17676 345 aa4.24□□□□□ -1.73
VPS36-206ENST00000497149 LBPP18428 481 aa4.24□□□□□ -1.73
VPS36-206ENST00000497149 NR0B1P51843 470 aaKnown RBP4.24□□□□□ -1.73
VPS36-206ENST00000497149 CRIP2P52943 208 aaPredicted RBP4.24□□□□□ -1.73
VPS36-206ENST00000497149 SULT2A1Q06520 285 aa4.24□□□□□ -1.73
VPS36-206ENST00000497149 RBBP7Q16576 425 aa4.24□□□□□ -1.73
VPS36-206ENST00000497149 TMEM30BQ3MIR4 351 aa4.24□□□□□ -1.73
VPS36-206ENST00000497149 TXNRD3NBQ6F5E7 133 aa4.24□□□□□ -1.73
VPS36-206ENST00000497149 FAM166AQ6J272 317 aa4.24□□□□□ -1.73
VPS36-206ENST00000497149 ZNF449Q6P9G9 518 aa4.24□□□□□ -1.73
VPS36-206ENST00000497149 CTR9Q6PD62 1173 aa4.24□□□□□ -1.73
VPS36-206ENST00000497149 LSMEM2Q8N112 164 aa4.24□□□□□ -1.73
VPS36-206ENST00000497149 NIPA2Q8N8Q9 360 aa4.24□□□□□ -1.73
VPS36-206ENST00000497149 OR7A2PQ8NGA2 310 aa4.24□□□□□ -1.73
VPS36-206ENST00000497149 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.24□□□□□ -1.73
VPS36-206ENST00000497149 TSACCQ96A04 125 aaPredicted RBP4.24□□□□□ -1.73
VPS36-206ENST00000497149 PYCR2Q96C36 320 aa4.24□□□□□ -1.73
VPS36-206ENST00000497149 C10orf90Q96M02 699 aa4.24□□□□□ -1.73
VPS36-206ENST00000497149 CCDC114Q96M63 670 aa4.24□□□□□ -1.73
VPS36-206ENST00000497149 GDAP1L1Q96MZ0 367 aa4.24□□□□□ -1.73
VPS36-206ENST00000497149 NDNQ99608 321 aa4.24□□□□□ -1.73
VPS36-206ENST00000497149 THAP2Q9H0W7 228 aa4.24□□□□□ -1.73
VPS36-206ENST00000497149 MINDY3Q9H8M7 445 aa4.24□□□□□ -1.73
VPS36-206ENST00000497149 DDX43Q9NXZ2 648 aaKnown RBP4.24□□□□□ -1.73
VPS36-206ENST00000497149 ERAP1Q9NZ08 941 aa4.24□□□□□ -1.73
VPS36-206ENST00000497149 PPP2R2CQ9Y2T4 447 aa4.24□□□□□ -1.73
VPS36-206ENST00000497149 KCNK7Q9Y2U2 307 aa4.24□□□□□ -1.73
VPS36-206ENST00000497149 IL16Q14005 1332 aa4.23□□□□□ -1.73
VPS36-206ENST00000497149 A0A087WW49 117 aa4.23□□□□□ -1.73
VPS36-206ENST00000497149 TRBV5-5A0A0J9YX44 114 aa4.23□□□□□ -1.73
VPS36-206ENST00000497149 SLCO1B7G3V0H7 640 aa4.23□□□□□ -1.73
VPS36-206ENST00000497149 H0Y626 953 aa4.23□□□□□ -1.73
VPS36-206ENST00000497149 CCL24O00175 119 aa4.23□□□□□ -1.73
VPS36-206ENST00000497149 PPIP5K2O43314 1243 aa4.23□□□□□ -1.73
VPS36-206ENST00000497149 EXTL3O43909 919 aa4.23□□□□□ -1.73
VPS36-206ENST00000497149 KHDRBS3O75525 346 aaKnown RBP4.23□□□□□ -1.73
VPS36-206ENST00000497149 BAG3O95817 575 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms