RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 AHSGP02765 367 aa23.14■■□□□ 1.29
HLA-C-209ENST00000495835 C8GP07360 202 aa23.14■■□□□ 1.29
HLA-C-209ENST00000495835 SP140Q13342 867 aa23.14■■□□□ 1.29
HLA-C-209ENST00000495835 PRTGQ2VWP7 1150 aa23.14■■□□□ 1.29
HLA-C-209ENST00000495835 GARNL3Q5VVW2 1013 aa23.14■■□□□ 1.29
HLA-C-209ENST00000495835 HIBCHQ6NVY1 386 aaPredicted RBP23.14■■□□□ 1.29
HLA-C-209ENST00000495835 COX15Q7KZN9 410 aa23.14■■□□□ 1.29
HLA-C-209ENST00000495835 PPP1R32Q7Z5V6 425 aa23.14■■□□□ 1.29
HLA-C-209ENST00000495835 KLHL7Q8IXQ5 586 aa23.14■■□□□ 1.29
HLA-C-209ENST00000495835 PALM2Q8IXS6 379 aa23.14■■□□□ 1.29
HLA-C-209ENST00000495835 OR4N4Q8N0Y3 316 aa23.14■■□□□ 1.29
HLA-C-209ENST00000495835 MIB2Q96AX9 1013 aa23.14■■□□□ 1.29
HLA-C-209ENST00000495835 CCDC138Q96M89 665 aa23.14■■□□□ 1.29
HLA-C-209ENST00000495835 SPSB2Q99619 263 aa23.14■■□□□ 1.29
HLA-C-209ENST00000495835 NUDT9Q9BW91 350 aa23.14■■□□□ 1.29
HLA-C-209ENST00000495835 PCBD2Q9H0N5 130 aa23.14■■□□□ 1.29
HLA-C-209ENST00000495835 ATP13A2Q9NQ11 1180 aa23.14■■□□□ 1.29
HLA-C-209ENST00000495835 SEMA3GQ9NS98 782 aa23.14■■□□□ 1.29
HLA-C-209ENST00000495835 SPENQ96T58 3664 aaKnown RBP23.13■■□□□ 1.29
HLA-C-209ENST00000495835 PCSK5Q92824 1860 aa23.13■■□□□ 1.29
HLA-C-209ENST00000495835 IGKV1-8A0A0C4DH67 115 aa23.13■■□□□ 1.29
HLA-C-209ENST00000495835 VSTM2BA6NLU5 285 aa23.13■■□□□ 1.29
HLA-C-209ENST00000495835 SYF2O95926 243 aaKnown RBP23.13■■□□□ 1.29
HLA-C-209ENST00000495835 GABRB3P28472 473 aa23.13■■□□□ 1.29
HLA-C-209ENST00000495835 TIAL1Q01085 375 aaKnown RBP eCLIP23.13■■□□□ 1.29
HLA-C-209ENST00000495835 CBLBQ13191 982 aa23.13■■□□□ 1.29
HLA-C-209ENST00000495835 MYBPC3Q14896 1274 aa23.13■■□□□ 1.29
HLA-C-209ENST00000495835 TEDDM1Q5T9Z0 273 aa23.13■■□□□ 1.29
HLA-C-209ENST00000495835 VWA5B1Q5TIE3 1220 aa23.13■■□□□ 1.29
HLA-C-209ENST00000495835 PIWIL4Q7Z3Z4 852 aaKnown RBP23.13■■□□□ 1.29
HLA-C-209ENST00000495835 GALNT16Q8N428 558 aa23.13■■□□□ 1.29
HLA-C-209ENST00000495835 EEF1AKMT1Q8WVE0 214 aa23.13■■□□□ 1.29
HLA-C-209ENST00000495835 SNF8Q96H20 258 aa23.13■■□□□ 1.29
HLA-C-209ENST00000495835 OR2A5Q96R48 311 aa23.13■■□□□ 1.29
HLA-C-209ENST00000495835 TEX264Q9Y6I9 313 aa23.13■■□□□ 1.29
HLA-C-209ENST00000495835 MDC1Q14676 2089 aaKnown RBP23.13■■□□□ 1.29
HLA-C-209ENST00000495835 FLNCQ14315 2725 aa23.13■■□□□ 1.29
HLA-C-209ENST00000495835 H0YGG7 62 aa23.12■■□□□ 1.29
HLA-C-209ENST00000495835 PRPF4O43172 522 aaKnown RBP eCLIP23.12■■□□□ 1.29
HLA-C-209ENST00000495835 IPO13O94829 963 aaKnown RBP23.12■■□□□ 1.29
HLA-C-209ENST00000495835 ALPPP05187 535 aa23.12■■□□□ 1.29
HLA-C-209ENST00000495835 EIF2S1P05198 315 aaKnown RBP23.12■■□□□ 1.29
HLA-C-209ENST00000495835 F7P08709 466 aaPredicted RBP23.12■■□□□ 1.29
HLA-C-209ENST00000495835 VARSP26640 1264 aaKnown RBP23.12■■□□□ 1.29
HLA-C-209ENST00000495835 IMPA1P29218 277 aa23.12■■□□□ 1.29
HLA-C-209ENST00000495835 ELK3P41970 407 aa23.12■■□□□ 1.29
HLA-C-209ENST00000495835 CARSP49589 748 aaKnown RBP23.12■■□□□ 1.29
HLA-C-209ENST00000495835 ARL4CP56559 192 aa23.12■■□□□ 1.29
HLA-C-209ENST00000495835 ARF3P61204 181 aaPredicted RBP23.12■■□□□ 1.29
HLA-C-209ENST00000495835 YBX1P67809 324 aaKnown RBP23.12■■□□□ 1.29
HLA-C-209ENST00000495835 HIF1AQ16665 826 aa23.12■■□□□ 1.29
HLA-C-209ENST00000495835 STEAP4Q687X5 459 aa23.12■■□□□ 1.29
HLA-C-209ENST00000495835 IGDCC3Q8IVU1 814 aa23.12■■□□□ 1.29
HLA-C-209ENST00000495835 MYO1HQ8N1T3 1032 aa23.12■■□□□ 1.29
HLA-C-209ENST00000495835 PARVBQ9HBI1 364 aa23.12■■□□□ 1.29
HLA-C-209ENST00000495835 TMEM184CQ9NVA4 438 aa23.12■■□□□ 1.29
HLA-C-209ENST00000495835 IGLV3-12A0A075B6K2 115 aa23.11■■□□□ 1.29
HLA-C-209ENST00000495835 A6NL46 340 aa23.11■■□□□ 1.29
HLA-C-209ENST00000495835 BANF1O75531 89 aa23.11■■□□□ 1.29
HLA-C-209ENST00000495835 SEC31AO94979 1220 aaKnown RBP23.11■■□□□ 1.29
HLA-C-209ENST00000495835 CCND1P24385 295 aa23.11■■□□□ 1.29
HLA-C-209ENST00000495835 OR1D4P47884 311 aa23.11■■□□□ 1.29
HLA-C-209ENST00000495835 OCA2Q04671 838 aa23.11■■□□□ 1.29
HLA-C-209ENST00000495835 AIMP2Q13155 320 aaKnown RBP23.11■■□□□ 1.29
HLA-C-209ENST00000495835 TSTA3Q13630 321 aaPredicted RBP23.11■■□□□ 1.29
HLA-C-209ENST00000495835 IGFBP7Q16270 282 aa23.11■■□□□ 1.29
HLA-C-209ENST00000495835 THEMIS2Q5TEJ8 643 aa23.11■■□□□ 1.29
HLA-C-209ENST00000495835 IGFL3Q6UXB1 125 aa23.11■■□□□ 1.29
HLA-C-209ENST00000495835 ATCAYQ86WG3 371 aa23.11■■□□□ 1.29
HLA-C-209ENST00000495835 PPFIBP2Q8ND30 876 aa23.11■■□□□ 1.29
HLA-C-209ENST00000495835 RERGQ96A58 199 aaPredicted RBP23.11■■□□□ 1.29
HLA-C-209ENST00000495835 CCDC177Q9NQR7 707 aaPredicted RBP23.11■■□□□ 1.29
HLA-C-209ENST00000495835 ZNF282Q9UDV7 671 aaPredicted RBP23.11■■□□□ 1.29
HLA-C-209ENST00000495835 NBASA2RRP1 2371 aa23.11■■□□□ 1.29
HLA-C-209ENST00000495835 TTLL8A6PVC2 850 aa23.1■■□□□ 1.29
HLA-C-209ENST00000495835 NRP2O60462 931 aa23.1■■□□□ 1.29
HLA-C-209ENST00000495835 SORBS2O94875 1100 aaKnown RBP23.1■■□□□ 1.29
HLA-C-209ENST00000495835 ITGA8P53708 1063 aa23.1■■□□□ 1.29
HLA-C-209ENST00000495835 ILF2Q12905 390 aaKnown RBP23.1■■□□□ 1.29
HLA-C-209ENST00000495835 PAQR3Q6TCH7 311 aa23.1■■□□□ 1.29
HLA-C-209ENST00000495835 ZDHHC19Q8WVZ1 309 aaPredicted RBP23.1■■□□□ 1.29
HLA-C-209ENST00000495835 COL26A1Q96A83 441 aa23.1■■□□□ 1.29
HLA-C-209ENST00000495835 PNPLA2Q96AD5 504 aa23.1■■□□□ 1.29
HLA-C-209ENST00000495835 CABS1Q96KC9 395 aa23.1■■□□□ 1.29
HLA-C-209ENST00000495835 C10orf90Q96M02 699 aa23.1■■□□□ 1.29
HLA-C-209ENST00000495835 NDNQ99608 321 aa23.1■■□□□ 1.29
HLA-C-209ENST00000495835 PLAC1Q9HBJ0 212 aa23.1■■□□□ 1.29
HLA-C-209ENST00000495835 PPANQ9NQ55 473 aaKnown RBP23.1■■□□□ 1.29
HLA-C-209ENST00000495835 STOX2Q9P2F5 926 aaPredicted RBP23.1■■□□□ 1.29
HLA-C-209ENST00000495835 CDC23Q9UJX2 597 aa23.1■■□□□ 1.29
HLA-C-209ENST00000495835 PDE10AQ9Y233 779 aa23.1■■□□□ 1.29
HLA-C-209ENST00000495835 PRRC2CQ9Y520 2896 aaKnown RBP23.1■■□□□ 1.29
HLA-C-209ENST00000495835 KCNE1BA0A087WTH5 132 aa23.09■■□□□ 1.29
HLA-C-209ENST00000495835 PCDH17O14917 1159 aa23.09■■□□□ 1.29
HLA-C-209ENST00000495835 TTI1O43156 1089 aa23.09■■□□□ 1.29
HLA-C-209ENST00000495835 HIST1H2AGP0C0S8 130 aaPredicted RBP23.09■■□□□ 1.29
HLA-C-209ENST00000495835 HIST1H2ADP20671 130 aa23.09■■□□□ 1.29
HLA-C-209ENST00000495835 MLLT10P55197 1068 aa23.09■■□□□ 1.29
HLA-C-209ENST00000495835 IL2P60568 153 aa23.09■■□□□ 1.29
HLA-C-209ENST00000495835 FAM53BQ14153 422 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms