RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 AP1B1Q10567 949 aa13.64□□□□□ -0.23
CHMP2B-205ENST00000494980 CAPRIN1Q14444 709 aaKnown RBP13.64□□□□□ -0.23
CHMP2B-205ENST00000494980 FAM182AQ5T1J6 154 aa13.64□□□□□ -0.23
CHMP2B-205ENST00000494980 FKBP15Q5T1M5 1219 aa13.64□□□□□ -0.23
CHMP2B-205ENST00000494980 C1orf185Q5T7R7 199 aa13.64□□□□□ -0.23
CHMP2B-205ENST00000494980 RIPPLY2Q5TAB7 128 aa13.64□□□□□ -0.23
CHMP2B-205ENST00000494980 CPEB2Q7Z5Q1 589 aaKnown RBP13.64□□□□□ -0.23
CHMP2B-205ENST00000494980 ZC3H7AQ8IWR0 971 aaKnown RBP13.64□□□□□ -0.23
CHMP2B-205ENST00000494980 METTL21AQ8WXB1 218 aa13.64□□□□□ -0.23
CHMP2B-205ENST00000494980 SMC6Q96SB8 1091 aa13.64□□□□□ -0.23
CHMP2B-205ENST00000494980 GSX2Q9BZM3 304 aa13.64□□□□□ -0.23
CHMP2B-205ENST00000494980 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.64□□□□□ -0.23
CHMP2B-205ENST00000494980 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.64□□□□□ -0.23
CHMP2B-205ENST00000494980 MTRF1LQ9UGC7 380 aaKnown RBP13.64□□□□□ -0.23
CHMP2B-205ENST00000494980 ZC3H7BQ9UGR2 993 aaKnown RBP13.64□□□□□ -0.23
CHMP2B-205ENST00000494980 FOXD3Q9UJU5 478 aaPredicted RBP13.64□□□□□ -0.23
CHMP2B-205ENST00000494980 CDC42EP3Q9UKI2 254 aa13.64□□□□□ -0.23
CHMP2B-205ENST00000494980 VPS9D1Q9Y2B5 631 aa13.64□□□□□ -0.23
CHMP2B-205ENST00000494980 NPFFR2Q9Y5X5 522 aa13.64□□□□□ -0.23
CHMP2B-205ENST00000494980 RYR3Q15413 4870 aa13.63□□□□□ -0.23
CHMP2B-205ENST00000494980 RAI1Q7Z5J4 1906 aaPredicted RBP13.63□□□□□ -0.23
CHMP2B-205ENST00000494980 RNF223E7ERA6 249 aa13.63□□□□□ -0.23
CHMP2B-205ENST00000494980 KLRC4-KLRK1H3BQV0 150 aa13.63□□□□□ -0.23
CHMP2B-205ENST00000494980 BCKDKO14874 412 aa13.63□□□□□ -0.23
CHMP2B-205ENST00000494980 PEX1O43933 1283 aa13.63□□□□□ -0.23
CHMP2B-205ENST00000494980 RNF8O76064 485 aa13.63□□□□□ -0.23
CHMP2B-205ENST00000494980 UCHL3P15374 230 aa13.63□□□□□ -0.23
CHMP2B-205ENST00000494980 CYB561P49447 251 aa13.63□□□□□ -0.23
CHMP2B-205ENST00000494980 MUM1Q2TAK8 710 aa13.63□□□□□ -0.23
CHMP2B-205ENST00000494980 ZDHHC20Q5W0Z9 365 aa13.63□□□□□ -0.23
CHMP2B-205ENST00000494980 FRMPD2BQ6IN97 320 aa13.63□□□□□ -0.23
CHMP2B-205ENST00000494980 PAOXQ6QHF9 649 aa13.63□□□□□ -0.23
CHMP2B-205ENST00000494980 FIGLAQ6QHK4 219 aa13.63□□□□□ -0.23
CHMP2B-205ENST00000494980 KIF18BQ86Y91 864 aa13.63□□□□□ -0.23
CHMP2B-205ENST00000494980 AMER3Q8N944 861 aa13.63□□□□□ -0.23
CHMP2B-205ENST00000494980 ZFP62Q8NB50 900 aaPredicted RBP13.63□□□□□ -0.23
CHMP2B-205ENST00000494980 SMPDL3BQ92485 455 aa13.63□□□□□ -0.23
CHMP2B-205ENST00000494980 HSPH1Q92598 858 aa13.63□□□□□ -0.23
CHMP2B-205ENST00000494980 STK33Q9BYT3 514 aa13.63□□□□□ -0.23
CHMP2B-205ENST00000494980 TGIF2Q9GZN2 237 aa13.63□□□□□ -0.23
CHMP2B-205ENST00000494980 CDCP1Q9H5V8 836 aa13.63□□□□□ -0.23
CHMP2B-205ENST00000494980 MKKSQ9NPJ1 570 aaPredicted RBP13.63□□□□□ -0.23
CHMP2B-205ENST00000494980 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.63□□□□□ -0.23
CHMP2B-205ENST00000494980 ZNF281Q9Y2X9 895 aa13.63□□□□□ -0.23
CHMP2B-205ENST00000494980 DVL2O14641 736 aa13.62□□□□□ -0.23
CHMP2B-205ENST00000494980 PRPF4O43172 522 aaKnown RBP eCLIP13.62□□□□□ -0.23
CHMP2B-205ENST00000494980 CTSVO60911 334 aa13.62□□□□□ -0.23
CHMP2B-205ENST00000494980 EIF2S1P05198 315 aaKnown RBP13.62□□□□□ -0.23
CHMP2B-205ENST00000494980 TPP2P29144 1249 aaPredicted RBP13.62□□□□□ -0.23
CHMP2B-205ENST00000494980 MTIF2P46199 727 aaKnown RBP13.62□□□□□ -0.23
CHMP2B-205ENST00000494980 GPR85P60893 370 aa13.62□□□□□ -0.23
CHMP2B-205ENST00000494980 SYT16Q17RD7 645 aa13.62□□□□□ -0.23
CHMP2B-205ENST00000494980 FATE1Q969F0 183 aa13.62□□□□□ -0.23
CHMP2B-205ENST00000494980 KIAA1191Q96A73 305 aa13.62□□□□□ -0.23
CHMP2B-205ENST00000494980 UBTD1Q9HAC8 227 aa13.62□□□□□ -0.23
CHMP2B-205ENST00000494980 MMP25Q9NPA2 562 aa13.62□□□□□ -0.23
CHMP2B-205ENST00000494980 RTN4Q9NQC3 1192 aaKnown RBP13.62□□□□□ -0.23
CHMP2B-205ENST00000494980 INTS7Q9NVH2 962 aaKnown RBP13.62□□□□□ -0.23
CHMP2B-205ENST00000494980 ASF1AQ9Y294 204 aa13.62□□□□□ -0.23
CHMP2B-205ENST00000494980 FAM169AQ9Y6X4 670 aa13.62□□□□□ -0.23
CHMP2B-205ENST00000494980 OR14I1A6ND48 311 aa13.61□□□□□ -0.23
CHMP2B-205ENST00000494980 A8MV72 311 aaPredicted RBP13.61□□□□□ -0.23
CHMP2B-205ENST00000494980 NDC80O14777 642 aa13.61□□□□□ -0.23
CHMP2B-205ENST00000494980 BUD23O43709 281 aaKnown RBP13.61□□□□□ -0.23
CHMP2B-205ENST00000494980 WDR1O75083 606 aa13.61□□□□□ -0.23
CHMP2B-205ENST00000494980 CCNCP24863 283 aa13.61□□□□□ -0.23
CHMP2B-205ENST00000494980 IL1R2P27930 398 aa13.61□□□□□ -0.23
CHMP2B-205ENST00000494980 TAS2R50P59544 299 aa13.61□□□□□ -0.23
CHMP2B-205ENST00000494980 SORDQ00796 357 aa13.61□□□□□ -0.23
CHMP2B-205ENST00000494980 NOMO1Q15155 1222 aa13.61□□□□□ -0.23
CHMP2B-205ENST00000494980 EXT1Q16394 746 aa13.61□□□□□ -0.23
CHMP2B-205ENST00000494980 IFI16Q16666 785 aaKnown RBP13.61□□□□□ -0.23
CHMP2B-205ENST00000494980 ZNF658BQ4V348 819 aaPredicted RBP13.61□□□□□ -0.23
CHMP2B-205ENST00000494980 TAX1BP1Q86VP1 789 aa13.61□□□□□ -0.23
CHMP2B-205ENST00000494980 LMNTD1Q8N9Z9 388 aa13.61□□□□□ -0.23
CHMP2B-205ENST00000494980 M1APQ8TC57 530 aa13.61□□□□□ -0.23
CHMP2B-205ENST00000494980 CABS1Q96KC9 395 aa13.61□□□□□ -0.23
CHMP2B-205ENST00000494980 SRPK1Q96SB4 655 aaKnown RBP13.61□□□□□ -0.23
CHMP2B-205ENST00000494980 TRIM7Q9C029 511 aa13.61□□□□□ -0.23
CHMP2B-205ENST00000494980 VN1R1Q9GZP7 353 aa13.61□□□□□ -0.23
CHMP2B-205ENST00000494980 C19orf25Q9UFG5 118 aaPredicted RBP13.61□□□□□ -0.23
CHMP2B-205ENST00000494980 CDC14AQ9UNH5 594 aa13.61□□□□□ -0.23
CHMP2B-205ENST00000494980 LIPGQ9Y5X9 500 aa13.61□□□□□ -0.23
CHMP2B-205ENST00000494980 WNK1Q9H4A3 2382 aa13.6□□□□□ -0.23
CHMP2B-205ENST00000494980 LOC105369274A0A096LPK9 316 aa13.6□□□□□ -0.23
CHMP2B-205ENST00000494980 LOC102723532A0A0G2JNH3 316 aa13.6□□□□□ -0.23
CHMP2B-205ENST00000494980 SERINC4A6NH21 518 aa13.6□□□□□ -0.23
CHMP2B-205ENST00000494980 HSPB2A8KAH6 182 aa13.6□□□□□ -0.23
CHMP2B-205ENST00000494980 FAM166BA8MTA8 275 aa13.6□□□□□ -0.23
CHMP2B-205ENST00000494980 SLC16A5O15375 505 aa13.6□□□□□ -0.23
CHMP2B-205ENST00000494980 SRPX2O60687 465 aaPredicted RBP13.6□□□□□ -0.23
CHMP2B-205ENST00000494980 SOX30O94993 753 aa13.6□□□□□ -0.23
CHMP2B-205ENST00000494980 NDST3O95803 873 aa13.6□□□□□ -0.23
CHMP2B-205ENST00000494980 FPR1P21462 350 aa13.6□□□□□ -0.23
CHMP2B-205ENST00000494980 CFPP27918 469 aa13.6□□□□□ -0.23
CHMP2B-205ENST00000494980 SLC26A3P40879 764 aa13.6□□□□□ -0.23
CHMP2B-205ENST00000494980 HSPB2Q16082 182 aa13.6□□□□□ -0.23
CHMP2B-205ENST00000494980 ACKR1Q16570 336 aa13.6□□□□□ -0.23
CHMP2B-205ENST00000494980 FREM1Q5H8C1 2179 aa13.6□□□□□ -0.23
CHMP2B-205ENST00000494980 RPS19BP1Q86WX3 136 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms