RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 ZNF548Q8NEK5 533 aaPredicted RBP10.05□□□□□ -0.8
SAMM50-206ENST00000494795 OR7G3Q8NG95 312 aa10.05□□□□□ -0.8
SAMM50-206ENST00000494795 SUSD6Q92537 303 aa10.05□□□□□ -0.8
SAMM50-206ENST00000494795 DUS3LQ96G46 650 aaKnown RBP10.05□□□□□ -0.8
SAMM50-206ENST00000494795 VPS50Q96JG6 964 aa10.05□□□□□ -0.8
SAMM50-206ENST00000494795 ZNF597Q96LX8 424 aa10.05□□□□□ -0.8
SAMM50-206ENST00000494795 REXO4Q9GZR2 422 aaKnown RBP10.05□□□□□ -0.8
SAMM50-206ENST00000494795 OR51B5Q9H339 312 aa10.05□□□□□ -0.8
SAMM50-206ENST00000494795 WDR37Q9Y2I8 494 aa10.05□□□□□ -0.8
SAMM50-206ENST00000494795 FADS3Q9Y5Q0 445 aa10.05□□□□□ -0.8
SAMM50-206ENST00000494795 KIAA1549LQ6ZVL6 1849 aa10.05□□□□□ -0.8
SAMM50-206ENST00000494795 TRBV5-3A0A0A0MS03 114 aa10.05□□□□□ -0.8
SAMM50-206ENST00000494795 ENO4A6NNW6 628 aa10.05□□□□□ -0.8
SAMM50-206ENST00000494795 UPK1AO00322 258 aa10.05□□□□□ -0.8
SAMM50-206ENST00000494795 LIN7AO14910 233 aaPredicted RBP10.05□□□□□ -0.8
SAMM50-206ENST00000494795 KLHL18O94889 574 aa10.05□□□□□ -0.8
SAMM50-206ENST00000494795 ASLP04424 464 aa10.05□□□□□ -0.8
SAMM50-206ENST00000494795 PIM1P11309 404 aaPredicted RBP10.05□□□□□ -0.8
SAMM50-206ENST00000494795 PSMA4P25789 261 aaKnown RBP10.05□□□□□ -0.8
SAMM50-206ENST00000494795 INPP5AQ14642 412 aa10.05□□□□□ -0.8
SAMM50-206ENST00000494795 PRMT9Q6P2P2 845 aa10.05□□□□□ -0.8
SAMM50-206ENST00000494795 GPR149Q86SP6 731 aa10.05□□□□□ -0.8
SAMM50-206ENST00000494795 CHERPQ8IWX8 916 aaKnown RBP10.05□□□□□ -0.8
SAMM50-206ENST00000494795 MARVELD2Q8N4S9 558 aa10.05□□□□□ -0.8
SAMM50-206ENST00000494795 JPH3Q8WXH2 748 aaPredicted RBP10.05□□□□□ -0.8
SAMM50-206ENST00000494795 ZDHHC5Q9C0B5 715 aa10.05□□□□□ -0.8
SAMM50-206ENST00000494795 SNX6Q9UNH7 406 aa10.05□□□□□ -0.8
SAMM50-206ENST00000494795 CA5BQ9Y2D0 317 aa10.05□□□□□ -0.8
SAMM50-206ENST00000494795 DIRAS1O95057 198 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 SNAP29O95721 258 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 PRKACGP22612 351 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 HNMTP50135 292 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 RUNDC3AQ59EK9 446 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 AGBL4Q5VU57 503 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 TMEM179BQ7Z7N9 219 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 TRPV3Q8NET8 790 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 OR2T12Q8NG77 320 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 MAGEE2Q8TD90 523 aaPredicted RBP10.04□□□□□ -0.8
SAMM50-206ENST00000494795 TSPEARQ8WU66 669 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 BTBD9Q96Q07 612 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 CCT7Q99832 543 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 VCX3BQ9H321 246 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 MRGBPQ9NV56 204 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 ZFR2Q9UPR6 939 aaKnown RBP10.04□□□□□ -0.8
SAMM50-206ENST00000494795 STON1Q9Y6Q2 735 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 U3KQV3 271 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 AQP12BA6NM10 295 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 SCN2BO60939 215 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 AP2A2O94973 939 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 CPSF4O95639 269 aaKnown RBP10.04□□□□□ -0.8
SAMM50-206ENST00000494795 TFAP2AP05549 437 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 BMP2P12643 396 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 HOXB9P17482 250 aaPredicted RBP10.04□□□□□ -0.8
SAMM50-206ENST00000494795 GGT1P19440 569 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 CLDN8P56748 225 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 EEFSECP57772 596 aaKnown RBP10.04□□□□□ -0.8
SAMM50-206ENST00000494795 TAP2Q03519 686 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 FOXM1Q08050 763 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 BNIP2Q12982 314 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 ZNF385BQ569K4 471 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 ZNF852Q6ZMS4 543 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 CHST15Q7LFX5 561 aaPredicted RBP10.04□□□□□ -0.8
SAMM50-206ENST00000494795 PLD3Q8IV08 490 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 AQP12AQ8IXF9 295 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 TMIEQ8NEW7 156 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 WDR48Q8TAF3 677 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 WFIKKN2Q8TEU8 576 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 UCN3Q969E3 161 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 SH3KBP1Q96B97 665 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 TMIGD2Q96BF3 282 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 LRIG1Q96JA1 1093 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 BARD1Q99728 777 aaKnown RBP10.04□□□□□ -0.8
SAMM50-206ENST00000494795 MACROD1Q9BQ69 325 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 SLC29A3Q9BZD2 475 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 GRIP2Q9C0E4 1043 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 KAT8Q9H7Z6 458 aaKnown RBP10.04□□□□□ -0.8
SAMM50-206ENST00000494795 KLHL42Q9P2K6 505 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 BCAP29Q9UHQ4 241 aa10.04□□□□□ -0.8
SAMM50-206ENST00000494795 H0Y858 1186 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 PPM1DO15297 605 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 PRKD3O94806 890 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 HOXB3P14651 431 aaPredicted RBP10.03□□□□□ -0.8
SAMM50-206ENST00000494795 HTR1EP28566 365 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 YAP1P46937 504 aaKnown RBP10.03□□□□□ -0.8
SAMM50-206ENST00000494795 GZMMP51124 257 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 GALK1P51570 392 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 AP1S2P56377 157 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 NAA20P61599 178 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 CYP4F2P78329 520 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 FCHO2Q0JRZ9 810 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 SLCO4C1Q6ZQN7 724 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 ARMCX6Q7L4S7 300 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 LRRC56Q8IYG6 542 aaPredicted RBP10.03□□□□□ -0.8
SAMM50-206ENST00000494795 FRMD1Q8N878 549 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 OR4K1Q8NGD4 311 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 OR56A3Q8NH54 315 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 MAL2Q969L2 176 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 ITCHQ96J02 903 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 TRIM39Q9HCM9 518 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 CLEC1BQ9P126 229 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms