RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 MVB12AQ96EY5 273 aa22.14■■□□□ 1.13
COL27A1-208ENST00000494780 CABS1Q96KC9 395 aa22.14■■□□□ 1.13
COL27A1-208ENST00000494780 PLCD4Q9BRC7 762 aa22.14■■□□□ 1.13
COL27A1-208ENST00000494780 MESP1Q9BRJ9 268 aa22.14■■□□□ 1.13
COL27A1-208ENST00000494780 ACAT2Q9BWD1 397 aa22.14■■□□□ 1.13
COL27A1-208ENST00000494780 MRPS30Q9NP92 439 aaKnown RBP22.14■■□□□ 1.13
COL27A1-208ENST00000494780 FAM114A2Q9NRY5 505 aa22.14■■□□□ 1.13
COL27A1-208ENST00000494780 TSR3Q9UJK0 312 aaKnown RBP22.14■■□□□ 1.13
COL27A1-208ENST00000494780 MYO1CO00159 1063 aa22.13■■□□□ 1.13
COL27A1-208ENST00000494780 PSIP1O75475 530 aaKnown RBP22.13■■□□□ 1.13
COL27A1-208ENST00000494780 USP1O94782 785 aa22.13■■□□□ 1.13
COL27A1-208ENST00000494780 KLHL18O94889 574 aa22.13■■□□□ 1.13
COL27A1-208ENST00000494780 OGNP20774 298 aaKnown RBP22.13■■□□□ 1.13
COL27A1-208ENST00000494780 RPA3P35244 121 aaPredicted RBP22.13■■□□□ 1.13
COL27A1-208ENST00000494780 HSD17B2P37059 387 aa22.13■■□□□ 1.13
COL27A1-208ENST00000494780 VWA2Q5GFL6 755 aa22.13■■□□□ 1.13
COL27A1-208ENST00000494780 ARMC3Q5W041 872 aa22.13■■□□□ 1.13
COL27A1-208ENST00000494780 NDUFAF7Q7L592 441 aa22.13■■□□□ 1.13
COL27A1-208ENST00000494780 FAM136AQ96C01 138 aa22.13■■□□□ 1.13
COL27A1-208ENST00000494780 C8orf44Q96CB5 159 aa22.13■■□□□ 1.13
COL27A1-208ENST00000494780 STOX2Q9P2F5 926 aaPredicted RBP22.13■■□□□ 1.13
COL27A1-208ENST00000494780 CRYL1Q9Y2S2 319 aa22.13■■□□□ 1.13
COL27A1-208ENST00000494780 CENPEQ02224 2701 aa22.13■■□□□ 1.13
COL27A1-208ENST00000494780 ITPR2Q14571 2701 aa22.12■■□□□ 1.13
COL27A1-208ENST00000494780 NSG1A0A0A6YYJ2 146 aa22.12■■□□□ 1.13
COL27A1-208ENST00000494780 ZNF839A8K0R7 811 aa22.12■■□□□ 1.13
COL27A1-208ENST00000494780 GOLGA6L6A8MZA4 724 aa22.12■■□□□ 1.13
COL27A1-208ENST00000494780 FGGP02679 453 aa22.12■■□□□ 1.13
COL27A1-208ENST00000494780 FDXRP22570 491 aa22.12■■□□□ 1.13
COL27A1-208ENST00000494780 KCNJ1P48048 391 aa22.12■■□□□ 1.13
COL27A1-208ENST00000494780 PER3P56645 1201 aa22.12■■□□□ 1.13
COL27A1-208ENST00000494780 DSG2Q14126 1118 aa22.12■■□□□ 1.13
COL27A1-208ENST00000494780 KLHL38Q2WGJ6 581 aa22.12■■□□□ 1.13
COL27A1-208ENST00000494780 ACSBG2Q5FVE4 666 aa22.12■■□□□ 1.13
COL27A1-208ENST00000494780 FAM180AQ6UWF9 173 aa22.12■■□□□ 1.13
COL27A1-208ENST00000494780 SUSD1Q6UWL2 747 aa22.12■■□□□ 1.13
COL27A1-208ENST00000494780 PAQR7Q86WK9 346 aa22.12■■□□□ 1.13
COL27A1-208ENST00000494780 C14orf105Q9NVL8 296 aa22.12■■□□□ 1.13
COL27A1-208ENST00000494780 UTP6Q9NYH9 597 aaKnown RBP22.12■■□□□ 1.13
COL27A1-208ENST00000494780 TRPC4Q9UBN4 977 aa22.12■■□□□ 1.13
COL27A1-208ENST00000494780 OSGIN2Q9Y236 505 aa22.12■■□□□ 1.13
COL27A1-208ENST00000494780 RUVBL1Q9Y265 456 aaKnown RBP22.12■■□□□ 1.13
COL27A1-208ENST00000494780 VPS9D1Q9Y2B5 631 aa22.12■■□□□ 1.13
COL27A1-208ENST00000494780 CACNA1DQ01668 2161 aa22.11■■□□□ 1.13
COL27A1-208ENST00000494780 A0A1W2PQ72 361 aa22.11■■□□□ 1.13
COL27A1-208ENST00000494780 IDSB3KWA1 339 aa22.11■■□□□ 1.13
COL27A1-208ENST00000494780 E5RI56 91 aa22.11■■□□□ 1.13
COL27A1-208ENST00000494780 PCDH17O14917 1159 aa22.11■■□□□ 1.13
COL27A1-208ENST00000494780 LRRTM2O43300 516 aa22.11■■□□□ 1.13
COL27A1-208ENST00000494780 CCNDBP1O95273 360 aa22.11■■□□□ 1.13
COL27A1-208ENST00000494780 CATP04040 527 aaKnown RBP22.11■■□□□ 1.13
COL27A1-208ENST00000494780 COX6A1P12074 109 aa22.11■■□□□ 1.13
COL27A1-208ENST00000494780 PKMP14618 531 aaKnown RBP22.11■■□□□ 1.13
COL27A1-208ENST00000494780 PAMP19021 973 aa22.11■■□□□ 1.13
COL27A1-208ENST00000494780 CXCR2P25025 360 aa22.11■■□□□ 1.13
COL27A1-208ENST00000494780 EMP2P54851 167 aa22.11■■□□□ 1.13
COL27A1-208ENST00000494780 GARNL3Q5VVW2 1013 aa22.11■■□□□ 1.13
COL27A1-208ENST00000494780 LAPTM4BQ86VI4 370 aa22.11■■□□□ 1.13
COL27A1-208ENST00000494780 CSNK1A1LQ8N752 337 aa22.11■■□□□ 1.13
COL27A1-208ENST00000494780 CATSPER1Q8NEC5 780 aa22.11■■□□□ 1.13
COL27A1-208ENST00000494780 PKP4Q99569 1192 aa22.11■■□□□ 1.13
COL27A1-208ENST00000494780 SLX1AQ9BQ83 275 aa22.11■■□□□ 1.13
COL27A1-208ENST00000494780 TRIM56Q9BRZ2 755 aaKnown RBP22.11■■□□□ 1.13
COL27A1-208ENST00000494780 HOMER3Q9NSC5 361 aa22.11■■□□□ 1.13
COL27A1-208ENST00000494780 GALPQ9UBC7 116 aa22.11■■□□□ 1.13
COL27A1-208ENST00000494780 IGKV1-8A0A0C4DH67 115 aa22.1■■□□□ 1.13
COL27A1-208ENST00000494780 TCRBV7S3A2A0A539 114 aa22.1■■□□□ 1.13
COL27A1-208ENST00000494780 SERPINA7P05543 415 aa22.1■■□□□ 1.13
COL27A1-208ENST00000494780 PRR35P0CG20 571 aa22.1■■□□□ 1.13
COL27A1-208ENST00000494780 SOX11P35716 441 aa22.1■■□□□ 1.13
COL27A1-208ENST00000494780 PNLIPRP1P54315 467 aa22.1■■□□□ 1.13
COL27A1-208ENST00000494780 ARG2P78540 354 aa22.1■■□□□ 1.13
COL27A1-208ENST00000494780 SARNPP82979 210 aaKnown RBP22.1■■□□□ 1.13
COL27A1-208ENST00000494780 RELAQ04206 551 aa22.1■■□□□ 1.13
COL27A1-208ENST00000494780 PRDX1Q06830 199 aaKnown RBP22.1■■□□□ 1.13
COL27A1-208ENST00000494780 ICE2Q659A1 982 aa22.1■■□□□ 1.13
COL27A1-208ENST00000494780 ZNF425Q6IV72 752 aa22.1■■□□□ 1.13
COL27A1-208ENST00000494780 NEPROQ6NW34 567 aa22.1■■□□□ 1.13
COL27A1-208ENST00000494780 NEK10Q6ZWH5 1172 aa22.1■■□□□ 1.13
COL27A1-208ENST00000494780 CENPUQ71F23 418 aa22.1■■□□□ 1.13
COL27A1-208ENST00000494780 CILP2Q8IUL8 1156 aa22.1■■□□□ 1.13
COL27A1-208ENST00000494780 BCORP1Q8N888 145 aa22.1■■□□□ 1.13
COL27A1-208ENST00000494780 OR1N1Q8NGS0 311 aa22.1■■□□□ 1.13
COL27A1-208ENST00000494780 PSMF1Q92530 271 aa22.1■■□□□ 1.13
COL27A1-208ENST00000494780 OR2A5Q96R48 311 aa22.1■■□□□ 1.13
COL27A1-208ENST00000494780 YIPF2Q9BWQ6 316 aa22.1■■□□□ 1.13
COL27A1-208ENST00000494780 INTS10Q9NVR2 710 aaKnown RBP22.1■■□□□ 1.13
COL27A1-208ENST00000494780 TAC3Q9UHF0 121 aa22.1■■□□□ 1.13
COL27A1-208ENST00000494780 DYTNA2CJ06 578 aa22.09■■□□□ 1.13
COL27A1-208ENST00000494780 TXNDC9O14530 226 aa22.09■■□□□ 1.13
COL27A1-208ENST00000494780 EZRP15311 586 aaKnown RBP22.09■■□□□ 1.13
COL27A1-208ENST00000494780 SLC26A3P40879 764 aa22.09■■□□□ 1.13
COL27A1-208ENST00000494780 TSTA3Q13630 321 aaPredicted RBP22.09■■□□□ 1.13
COL27A1-208ENST00000494780 HKDC1Q2TB90 917 aa22.09■■□□□ 1.13
COL27A1-208ENST00000494780 TTLL9Q3SXZ7 439 aa22.09■■□□□ 1.13
COL27A1-208ENST00000494780 FBXO15Q8NCQ5 510 aaPredicted RBP22.09■■□□□ 1.13
COL27A1-208ENST00000494780 RERGQ96A58 199 aaPredicted RBP22.09■■□□□ 1.13
COL27A1-208ENST00000494780 TGIF2Q9GZN2 237 aa22.09■■□□□ 1.13
COL27A1-208ENST00000494780 MKKSQ9NPJ1 570 aaPredicted RBP22.09■■□□□ 1.13
COL27A1-208ENST00000494780 OLAHQ9NV23 265 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms