RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 RHBDD2Q6NTF9 364 aa15.27■□□□□ 0.04
LIME1-209ENST00000494776 SBSNQ6UWP8 590 aa15.27■□□□□ 0.04
LIME1-209ENST00000494776 ADAMTSL2Q86TH1 951 aa15.27■□□□□ 0.04
LIME1-209ENST00000494776 C17orf64Q86WR6 236 aa15.27■□□□□ 0.04
LIME1-209ENST00000494776 SPATA6LQ8N4H0 392 aa15.27■□□□□ 0.04
LIME1-209ENST00000494776 PROKR1Q8TCW9 393 aa15.27■□□□□ 0.04
LIME1-209ENST00000494776 FBXL8Q96CD0 374 aa15.27■□□□□ 0.04
LIME1-209ENST00000494776 ARHGAP9Q9BRR9 750 aa15.27■□□□□ 0.04
LIME1-209ENST00000494776 UNKQ9C0B0 810 aaKnown RBP15.27■□□□□ 0.04
LIME1-209ENST00000494776 DERL2Q9GZP9 239 aa15.27■□□□□ 0.04
LIME1-209ENST00000494776 DHCR7Q9UBM7 475 aaKnown RBP15.27■□□□□ 0.04
LIME1-209ENST00000494776 GPN3Q9UHW5 284 aaPredicted RBP15.27■□□□□ 0.04
LIME1-209ENST00000494776 IKZF3Q9UKT9 509 aa15.27■□□□□ 0.04
LIME1-209ENST00000494776 FARSAQ9Y285 508 aaKnown RBP15.27■□□□□ 0.04
LIME1-209ENST00000494776 IKBKGQ9Y6K9 419 aa15.27■□□□□ 0.04
LIME1-209ENST00000494776 H3BMH7 237 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 H7BY64 318 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 ERVH48-1M5A8F1 160 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 NRP2O60462 931 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 CREG1O75629 220 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 ANXA5P08758 320 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 EZRP15311 586 aaKnown RBP15.26■□□□□ 0.03
LIME1-209ENST00000494776 HRH2P25021 359 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 PTPN4P29074 926 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 DCDP81605 110 aaKnown RBP15.26■□□□□ 0.03
LIME1-209ENST00000494776 ERV3-1Q14264 604 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 TSNQ15631 228 aaKnown RBP15.26■□□□□ 0.03
LIME1-209ENST00000494776 FAM214AQ32MH5 1076 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 MROH9Q5TGP6 573 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 FRMPD2BQ6IN97 320 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 LCN10Q6JVE6 187 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 FBXO42Q6P3S6 717 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 TTLL10Q6ZVT0 673 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 RNF44Q7L0R7 432 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 PAQR7Q86WK9 346 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 RERGQ96A58 199 aaPredicted RBP15.26■□□□□ 0.03
LIME1-209ENST00000494776 PYCR2Q96C36 320 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 PRAP1Q96NZ9 151 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 CATSPER2Q96P56 530 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 RUFY1Q96T51 708 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 C17orf62Q9BQA9 187 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 HAUS8Q9BT25 410 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 ACTL8Q9H568 366 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 ACSS3Q9H6R3 686 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 TMEM184CQ9NVA4 438 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 CUEDC1Q9NWM3 386 aaPredicted RBP15.26■□□□□ 0.03
LIME1-209ENST00000494776 OARD1Q9Y530 152 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 PCDHGA6Q9Y5G7 932 aa15.26■□□□□ 0.03
LIME1-209ENST00000494776 ITPR1Q14643 2758 aa15.25■□□□□ 0.03
LIME1-209ENST00000494776 PTPRQQ9UMZ3 2332 aa15.25■□□□□ 0.03
LIME1-209ENST00000494776 LOC105369274A0A096LPK9 316 aa15.25■□□□□ 0.03
LIME1-209ENST00000494776 IGKV1-8A0A0C4DH67 115 aa15.25■□□□□ 0.03
LIME1-209ENST00000494776 LOC102723532A0A0G2JNH3 316 aa15.25■□□□□ 0.03
LIME1-209ENST00000494776 TERTO14746 1132 aaKnown RBP15.25■□□□□ 0.03
LIME1-209ENST00000494776 ITGB2P05107 769 aa15.25■□□□□ 0.03
LIME1-209ENST00000494776 INHBAP08476 426 aa15.25■□□□□ 0.03
LIME1-209ENST00000494776 RAB40ALP0C0E4 278 aa15.25■□□□□ 0.03
LIME1-209ENST00000494776 CRABP2P29373 138 aa15.25■□□□□ 0.03
LIME1-209ENST00000494776 ATP6V0D1P61421 351 aa15.25■□□□□ 0.03
LIME1-209ENST00000494776 RPS18P62269 152 aaKnown RBP15.25■□□□□ 0.03
LIME1-209ENST00000494776 CDC20Q12834 499 aa15.25■□□□□ 0.03
LIME1-209ENST00000494776 CSHL1Q14406 222 aa15.25■□□□□ 0.03
LIME1-209ENST00000494776 ZKSCAN8Q15776 578 aaPredicted RBP15.25■□□□□ 0.03
LIME1-209ENST00000494776 PPP1R3AQ16821 1122 aa15.25■□□□□ 0.03
LIME1-209ENST00000494776 TEX35Q5T0J7 233 aa15.25■□□□□ 0.03
LIME1-209ENST00000494776 YOD1Q5VVQ6 348 aaPredicted RBP15.25■□□□□ 0.03
LIME1-209ENST00000494776 MLIPQ5VWP3 458 aa15.25■□□□□ 0.03
LIME1-209ENST00000494776 ZNF425Q6IV72 752 aa15.25■□□□□ 0.03
LIME1-209ENST00000494776 LCTLQ6UWM7 567 aa15.25■□□□□ 0.03
LIME1-209ENST00000494776 ZNF517Q6ZMY9 492 aaPredicted RBP15.25■□□□□ 0.03
LIME1-209ENST00000494776 CMC1Q7Z7K0 106 aa15.25■□□□□ 0.03
LIME1-209ENST00000494776 TBC1D1Q86TI0 1168 aaPredicted RBP15.25■□□□□ 0.03
LIME1-209ENST00000494776 OR4N4Q8N0Y3 316 aa15.25■□□□□ 0.03
LIME1-209ENST00000494776 ENDOVQ8N8Q3 282 aaKnown RBP15.25■□□□□ 0.03
LIME1-209ENST00000494776 LRRN4CLQ8ND94 238 aa15.25■□□□□ 0.03
LIME1-209ENST00000494776 UHMK1Q8TAS1 419 aaKnown RBP15.25■□□□□ 0.03
LIME1-209ENST00000494776 EXTL1Q92935 676 aa15.25■□□□□ 0.03
LIME1-209ENST00000494776 SGPP1Q9BX95 441 aa15.25■□□□□ 0.03
LIME1-209ENST00000494776 NLNQ9BYT8 704 aa15.25■□□□□ 0.03
LIME1-209ENST00000494776 L2HGDHQ9H9P8 463 aa15.25■□□□□ 0.03
LIME1-209ENST00000494776 CUTCQ9NTM9 273 aa15.25■□□□□ 0.03
LIME1-209ENST00000494776 IFT80Q9P2H3 777 aaPredicted RBP15.25■□□□□ 0.03
LIME1-209ENST00000494776 TLK1Q9UKI8 766 aa15.25■□□□□ 0.03
LIME1-209ENST00000494776 SNRNP200O75643 2136 aaKnown RBP15.25■□□□□ 0.03
LIME1-209ENST00000494776 A0A087WUV0 522 aaPredicted RBP15.24■□□□□ 0.03
LIME1-209ENST00000494776 A0A1B0GX78 115 aa15.24■□□□□ 0.03
LIME1-209ENST00000494776 HYKKA2RU49 373 aa15.24■□□□□ 0.03
LIME1-209ENST00000494776 CDC14CA4D256 554 aa15.24■□□□□ 0.03
LIME1-209ENST00000494776 NCF1BA6NI72 391 aaPredicted RBP15.24■□□□□ 0.03
LIME1-209ENST00000494776 NCF1CA8MVU1 366 aaPredicted RBP15.24■□□□□ 0.03
LIME1-209ENST00000494776 POC1B-GALNT4F8VUJ3 575 aa15.24■□□□□ 0.03
LIME1-209ENST00000494776 H0YGG7 62 aa15.24■□□□□ 0.03
LIME1-209ENST00000494776 HAT1O14929 419 aa15.24■□□□□ 0.03
LIME1-209ENST00000494776 NCF1P14598 390 aaPredicted RBP15.24■□□□□ 0.03
LIME1-209ENST00000494776 GRK3P35626 688 aa15.24■□□□□ 0.03
LIME1-209ENST00000494776 ARF3P61204 181 aaPredicted RBP15.24■□□□□ 0.03
LIME1-209ENST00000494776 CDKL1Q00532 357 aa15.24■□□□□ 0.03
LIME1-209ENST00000494776 BMPR2Q13873 1038 aa15.24■□□□□ 0.03
LIME1-209ENST00000494776 UBAP2Q5T6F2 1119 aaKnown RBP15.24■□□□□ 0.03
LIME1-209ENST00000494776 TAOK1Q7L7X3 1001 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms