RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 ECDO95905 644 aaPredicted RBP9.44□□□□□ -0.9
VPS8-225ENST00000492449 C9P02748 559 aa9.44□□□□□ -0.9
VPS8-225ENST00000492449 PFKMP08237 780 aa9.44□□□□□ -0.9
VPS8-225ENST00000492449 GOT1P17174 413 aa9.44□□□□□ -0.9
VPS8-225ENST00000492449 FOXA1P55317 472 aa9.44□□□□□ -0.9
VPS8-225ENST00000492449 ERVFC1P60507 584 aa9.44□□□□□ -0.9
VPS8-225ENST00000492449 ERVK-8P63133 956 aa9.44□□□□□ -0.9
VPS8-225ENST00000492449 PPP1R8Q12972 351 aaKnown RBP9.44□□□□□ -0.9
VPS8-225ENST00000492449 PPP1R26Q5T8A7 1209 aaPredicted RBP9.44□□□□□ -0.9
VPS8-225ENST00000492449 FAHD1Q6P587 224 aa9.44□□□□□ -0.9
VPS8-225ENST00000492449 PKN3Q6P5Z2 889 aa9.44□□□□□ -0.9
VPS8-225ENST00000492449 LCLAT1Q6UWP7 414 aa9.44□□□□□ -0.9
VPS8-225ENST00000492449 GPR155Q7Z3F1 870 aa9.44□□□□□ -0.9
VPS8-225ENST00000492449 ZZZ3Q8IYH5 903 aa9.44□□□□□ -0.9
VPS8-225ENST00000492449 EFHBQ8N7U6 833 aa9.44□□□□□ -0.9
VPS8-225ENST00000492449 HGDQ93099 445 aa9.44□□□□□ -0.9
VPS8-225ENST00000492449 TSPAN17Q96FV3 270 aa9.44□□□□□ -0.9
VPS8-225ENST00000492449 CDCA4Q9BXL8 241 aa9.44□□□□□ -0.9
VPS8-225ENST00000492449 ASPNQ9BXN1 380 aa9.44□□□□□ -0.9
VPS8-225ENST00000492449 MIXL1Q9H2W2 232 aa9.44□□□□□ -0.9
VPS8-225ENST00000492449 CLEC4MQ9H2X3 399 aaPredicted RBP9.44□□□□□ -0.9
VPS8-225ENST00000492449 ELOVL6Q9H5J4 265 aa9.44□□□□□ -0.9
VPS8-225ENST00000492449 TMEM134Q9H6X4 195 aa9.44□□□□□ -0.9
VPS8-225ENST00000492449 QTRT2Q9H974 415 aaKnown RBP9.44□□□□□ -0.9
VPS8-225ENST00000492449 MBD2Q9UBB5 411 aa9.44□□□□□ -0.9
VPS8-225ENST00000492449 ADAM30Q9UKF2 790 aa9.44□□□□□ -0.9
VPS8-225ENST00000492449 PCDHGB7Q9Y5F8 929 aa9.44□□□□□ -0.9
VPS8-225ENST00000492449 PCDHGA6Q9Y5G7 932 aa9.44□□□□□ -0.9
VPS8-225ENST00000492449 EP400Q96L91 3159 aa9.44□□□□□ -0.9
VPS8-225ENST00000492449 DOCK1Q14185 1865 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 UBA6A0AVT1 1052 aaPredicted RBP9.43□□□□□ -0.9
VPS8-225ENST00000492449 INPPL1O15357 1258 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 GATCO43716 136 aaKnown RBP9.43□□□□□ -0.9
VPS8-225ENST00000492449 CHP2O43745 196 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 MPC2O95563 127 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 PGRP06401 933 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 FPR1P21462 350 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 ITGB7P26010 798 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 ARL4AP40617 200 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 SLC1A2P43004 574 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 MEOX2P50222 304 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 RPP38P78345 283 aaKnown RBP9.43□□□□□ -0.9
VPS8-225ENST00000492449 DAB2P98082 770 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 HSF2Q03933 536 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 NPRL3Q12980 569 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 PRKG2Q13237 762 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 SEMA3AQ14563 771 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 WSCD2Q2TBF2 565 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 GPR33Q49SQ1 333 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 PCID2Q5JVF3 399 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 ZDHHC17Q8IUH5 632 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 SLC37A3Q8NCC5 494 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 SRFBP1Q8NEF9 429 aaKnown RBP9.43□□□□□ -0.9
VPS8-225ENST00000492449 CDC26Q8NHZ8 85 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 PROKR1Q8TCW9 393 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 CD244Q9BZW8 370 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 NT5DC2Q9H857 520 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 MID1IP1Q9NPA3 183 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 SDHAF2Q9NX18 166 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 KLHL8Q9P2G9 620 aaPredicted RBP9.43□□□□□ -0.9
VPS8-225ENST00000492449 MAB21L2Q9Y586 359 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 LTBP1Q14766 1721 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 ELOVL7A1L3X0 281 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 MPTX1A8MV57 137 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 PLOD3O60568 738 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 LINC00032P0C843 101 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 PRKAR1AP10644 381 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 ZNF37AP17032 561 aaPredicted RBP9.43□□□□□ -0.9
VPS8-225ENST00000492449 PTBP1P26599 531 aaKnown RBP eCLIP9.43□□□□□ -0.92e-6■■■■□ 26
VPS8-225ENST00000492449 DNAJA1P31689 397 aaKnown RBP9.43□□□□□ -0.9
VPS8-225ENST00000492449 CTBP1Q13363 440 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 C10orf62Q5T681 223 aaPredicted RBP9.43□□□□□ -0.9
VPS8-225ENST00000492449 CEP68Q76N32 757 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 ZSWIM9Q86XI8 627 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 PGBD5Q8N414 524 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 CAMKK1Q8N5S9 505 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 IL31RAQ8NI17 732 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 FAM162AQ96A26 154 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 PYURFQ96I23 114 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 VAT1Q99536 393 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 BARD1Q99728 777 aaKnown RBP9.43□□□□□ -0.9
VPS8-225ENST00000492449 FAM124BQ9H5Z6 455 aaPredicted RBP9.43□□□□□ -0.9
VPS8-225ENST00000492449 RASSF1Q9NS23 344 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 ASB4Q9Y574 426 aa9.43□□□□□ -0.9
VPS8-225ENST00000492449 TRAV6A0A075B6T7 132 aa9.42□□□□□ -0.9
VPS8-225ENST00000492449 FABP12A6NFH5 140 aa9.42□□□□□ -0.9
VPS8-225ENST00000492449 ZNF670-ZNF695F2Z2N8 137 aa9.42□□□□□ -0.9
VPS8-225ENST00000492449 PSMD3O43242 534 aa9.42□□□□□ -0.9
VPS8-225ENST00000492449 SRCP12931 536 aa9.42□□□□□ -0.9
VPS8-225ENST00000492449 TSPAN8P19075 237 aa9.42□□□□□ -0.9
VPS8-225ENST00000492449 CASP2P42575 452 aa9.42□□□□□ -0.9
VPS8-225ENST00000492449 CLCN5P51795 746 aa9.42□□□□□ -0.9
VPS8-225ENST00000492449 CARD16Q5EG05 197 aa9.42□□□□□ -0.9
VPS8-225ENST00000492449 NAPEPLDQ6IQ20 393 aa9.42□□□□□ -0.9
VPS8-225ENST00000492449 ZPBP2Q6X784 338 aa9.42□□□□□ -0.9
VPS8-225ENST00000492449 HSDL2Q6YN16 418 aa9.42□□□□□ -0.9
VPS8-225ENST00000492449 ARRDC4Q8NCT1 418 aa9.42□□□□□ -0.9
VPS8-225ENST00000492449 OR4D10Q8NGI6 311 aa9.42□□□□□ -0.9
VPS8-225ENST00000492449 TEX47Q8TBZ9 253 aa9.42□□□□□ -0.9
VPS8-225ENST00000492449 GRAPLQ8TC17 118 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms