RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 PLCL2Q9UPR0 1127 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 AP1M2Q9Y6Q5 423 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 USP9YO00507 2555 aaPredicted RBP12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 RP1L1Q8IWN7 2480 aaPredicted RBP12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 ARHGEF33A8MVX0 844 aa12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 KPNA5O15131 536 aa12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 CTIFO43310 598 aaKnown RBP12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 MED26O95402 600 aa12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 AHSGP02765 367 aa12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 INHBAP08476 426 aa12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 ABHD2P08910 425 aa12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 HBQ1P09105 142 aa12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 PKMP14618 531 aaKnown RBP12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 CHRM3P20309 590 aa12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 ATP5DP30049 168 aa12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 GP5P40197 560 aa12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 MSH2P43246 934 aa12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 CCL11P51671 97 aa12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 SLC12A2P55011 1212 aa12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 FOXK1P85037 733 aa12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 IFFO1Q0D2I5 559 aa12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 SLC9A5Q14940 896 aa12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 CYP2A13Q16696 494 aa12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 MRPL14Q6P1L8 145 aaKnown RBP12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 FIGLAQ6QHK4 219 aa12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 DTWD1Q8N5C7 304 aa12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 GPATCH11Q8N954 259 aa12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 RAD51AP1Q96B01 352 aa12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 TXLNGYQ9BZA5 131 aa12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 KLK4Q9Y5K2 254 aa12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 PSAT1Q9Y617 370 aa12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 COMMD10Q9Y6G5 202 aa12.17□□□□□ -0.46
SEC61A1-206ENST00000491668 ANKRD12Q6UB98 2062 aa12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 CCDC151A5D8V7 595 aa12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 CXorf49A8MYA2 514 aaPredicted RBP12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 MASP2O00187 686 aa12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 KDM1AO60341 852 aa12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 UMODP07911 640 aa12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 ERGP11308 486 aa12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 AGXTP21549 392 aa12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 SAT1P21673 171 aa12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 SPRP35270 261 aaPredicted RBP12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 HSD17B3P37058 310 aa12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 DCDP81605 110 aaKnown RBP12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 TIAL1Q01085 375 aaKnown RBP eCLIP12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 KLRB1Q12918 225 aa12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 ATP1A4Q13733 1029 aa12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 EFTUD2Q15029 972 aaKnown RBP eCLIP12.16□□□□□ -0.463e-6■■□□□ 14
SEC61A1-206ENST00000491668 SF1Q15637 639 aaKnown RBP12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 NKAIN1Q4KMZ8 207 aa12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 UBAP2Q5T6F2 1119 aaKnown RBP12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 GRTP1Q5TC63 336 aa12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 MLIPQ5VWP3 458 aa12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 TLDC1Q6P9B6 456 aa12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 TAOK1Q7L7X3 1001 aa12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 GALNT7Q86SF2 657 aa12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 MRGPREQ86SM8 312 aa12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 OR2L3Q8NG85 312 aa12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 PROKR1Q8TCW9 393 aa12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 SKA2Q8WVK7 121 aaPredicted RBP12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 N4BP2L2Q92802 583 aaPredicted RBP12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 MIPEPQ99797 713 aa12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 SLC7A5P2Q9GIP4 190 aa12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 SMYD2Q9NRG4 433 aa12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 SLC39A10Q9ULF5 831 aa12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 CORO1CQ9ULV4 474 aaPredicted RBP12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 PLAAQ9Y263 795 aa12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 PCDHGA9Q9Y5G4 932 aaKnown RBP12.16□□□□□ -0.46
SEC61A1-206ENST00000491668 LOC105369274A0A096LPK9 316 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 IGKV1-8A0A0C4DH67 115 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 LOC102723532A0A0G2JNH3 316 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 C9J4A7 227 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 MYO1CO00159 1063 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 VPS26AO75436 327 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 PSIP1O75475 530 aaKnown RBP12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 ONECUT2O95948 504 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 GABRB3P28472 473 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 CCNFP41002 786 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 LGSNQ5TDP6 509 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 FRMPD2BQ6IN97 320 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 UGT3A1Q6NUS8 523 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 CYHR1Q6ZMK1 362 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 COX15Q7KZN9 410 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 PPP1R32Q7Z5V6 425 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 OR4N4Q8N0Y3 316 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 FDCSPQ8NFU4 85 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 OR2Y1Q8NGV0 311 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 SLC22A18Q96BI1 424 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 VPS39Q96JC1 886 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 NDNQ99608 321 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 DHRS4Q9BTZ2 278 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 SLC25A23Q9BV35 468 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 NUDT9Q9BW91 350 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 RAB11FIP5Q9BXF6 653 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 RHOJQ9H4E5 214 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 SLC6A20Q9NP91 592 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 ACSS2Q9NR19 701 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 TAS2R13Q9NYV9 303 aa12.15□□□□□ -0.46
SEC61A1-206ENST00000491668 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms