RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 SNX7Q9UNH6 387 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 ZKSCAN5Q9Y2L8 839 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 A0A0J9YVX5 310 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 F8W735 103 aaPredicted RBP7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 MKRN2OSH3BPM6 223 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 RASGRF2O14827 1237 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 ALOX12BO75342 701 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 RFPL1O75677 317 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 SASH3O75995 380 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 HAUS5O94927 633 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 ALX3O95076 343 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 APOA4P06727 396 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 UMODP07911 640 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 MSL3P1P0C860 447 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 PKMP14618 531 aaKnown RBP7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 CHRM3P20309 590 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 SSTR4P31391 388 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 OR1D4P47884 311 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 TTPAP49638 278 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 RAB28P51157 221 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 MPP1Q00013 466 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 PLOD1Q02809 727 aaPredicted RBP7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 KLRB1Q12918 225 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 CUL1Q13616 776 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 ATP1A4Q13733 1029 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 DHX34Q14147 1143 aaKnown RBP7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 GBX1Q14549 363 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 KIR2DS3Q14952 304 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 NCF4Q15080 339 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 SF1Q15637 639 aaKnown RBP7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 CYP1B1Q16678 543 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 TYSND1Q2T9J0 566 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 KLHL38Q2WGJ6 581 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 HP1BP3Q5SSJ5 553 aaPredicted RBP7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 KIAA0930Q6ICG6 404 aaPredicted RBP7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 FRMPD2BQ6IN97 320 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 NEPROQ6NW34 567 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 CASC4Q6P4E1 433 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 CYB5D1Q6P9G0 228 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 CCDC137Q6PK04 289 aaKnown RBP7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 SUSD1Q6UWL2 747 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 UNC5DQ6UXZ4 953 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 C4orf22Q6V702 233 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 SHISA6Q6ZSJ9 500 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 IGDCC3Q8IVU1 814 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 DCUN1D3Q8IWE4 304 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 RBMXL3Q8N7X1 1067 aaKnown RBP7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 NAT8LQ8N9F0 302 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 TEX19Q8NA77 164 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 PPFIBP2Q8ND30 876 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 OR2A1Q8NGT9 310 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 GIMAP7Q8NHV1 300 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 SKA2Q8WVK7 121 aaPredicted RBP7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 PEX13Q92968 403 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 ZNF669Q96BR6 464 aaPredicted RBP7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 SERPINB12Q96P63 405 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 OSBPL9Q96SU4 736 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 PKP4Q99569 1192 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 ACAT2Q9BWD1 397 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 GRPEL1Q9HAV7 217 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 FANCEQ9HB96 536 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 PLAC1Q9HBJ0 212 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 ZBTB20Q9HC78 741 aaPredicted RBP7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 SYTL2Q9HCH5 934 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 SRA1Q9HD15 236 aaKnown RBP7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 MLXIPLQ9NP71 852 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 ACSS2Q9NR19 701 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 SLC17A6Q9P2U8 582 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 GNPTGQ9UJJ9 305 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 SLC39A10Q9ULF5 831 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 PLCL2Q9UPR0 1127 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 PTRH2Q9Y3E5 179 aaKnown RBP7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 JRKLQ9Y4A0 524 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 LRBAP50851 2863 aa7.01□□□□□ -1.29
PRPF4B-208ENST00000490653 FAM237BA0A1B0GVD1 139 aa7□□□□□ -1.29
PRPF4B-208ENST00000490653 SDR42E2A6NKP2 422 aa7□□□□□ -1.29
PRPF4B-208ENST00000490653 ARHGEF33A8MVX0 844 aa7□□□□□ -1.29
PRPF4B-208ENST00000490653 FFAR3O14843 346 aa7□□□□□ -1.29
PRPF4B-208ENST00000490653 GPR42O15529 346 aa7□□□□□ -1.29
PRPF4B-208ENST00000490653 KIF5CO60282 957 aa7□□□□□ -1.29
PRPF4B-208ENST00000490653 MATN4O95460 622 aa7□□□□□ -1.29
PRPF4B-208ENST00000490653 STATHP02808 62 aa7□□□□□ -1.29
PRPF4B-208ENST00000490653 GABRB3P28472 473 aa7□□□□□ -1.29
PRPF4B-208ENST00000490653 PPARGP37231 505 aaPredicted RBP7□□□□□ -1.29
PRPF4B-208ENST00000490653 MAGEA3P43357 314 aa7□□□□□ -1.29
PRPF4B-208ENST00000490653 CLCN7P51798 805 aa7□□□□□ -1.29
PRPF4B-208ENST00000490653 VSX2P58304 361 aaPredicted RBP7□□□□□ -1.29
PRPF4B-208ENST00000490653 DCDP81605 110 aaKnown RBP7□□□□□ -1.29
PRPF4B-208ENST00000490653 MRPS25P82663 173 aaKnown RBP7□□□□□ -1.29
PRPF4B-208ENST00000490653 CDK16Q00536 496 aa7□□□□□ -1.29
PRPF4B-208ENST00000490653 NKAIN1Q4KMZ8 207 aa7□□□□□ -1.29
PRPF4B-208ENST00000490653 PRR30Q53SZ7 412 aaPredicted RBP7□□□□□ -1.29
PRPF4B-208ENST00000490653 AARS2Q5JTZ9 985 aaKnown RBP7□□□□□ -1.29
PRPF4B-208ENST00000490653 WASHC2DQ5SRD0 308 aa7□□□□□ -1.29
PRPF4B-208ENST00000490653 RHBDD2Q6NTF9 364 aa7□□□□□ -1.29
PRPF4B-208ENST00000490653 TTLL10Q6ZVT0 673 aa7□□□□□ -1.29
PRPF4B-208ENST00000490653 COX15Q7KZN9 410 aa7□□□□□ -1.29
PRPF4B-208ENST00000490653 OTOAQ7RTW8 1153 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms