RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 SLC4A11Q8NBS3 891 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 NEXN-AS1Q8NBZ9 246 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 ACVR1CQ8NER5 493 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 KIF18AQ8NI77 898 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 NTN5Q8WTR8 489 aaPredicted RBP4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 ASB5Q8WWX0 329 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 CTAGE1Q96RT6 745 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 PCYT2Q99447 389 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 MTERF1Q99551 399 aaKnown RBP4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 MTG1Q9BT17 334 aaPredicted RBP4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 CNOT10Q9H9A5 744 aaKnown RBP4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 PFDN4Q9NQP4 134 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 OLAHQ9NV23 265 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 OSGIN1Q9UJX0 560 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 PADI3Q9ULW8 664 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 LY6G6EA0A0G2JKS1 128 aa4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 SOCS2O14508 198 aa4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 PPEF2O14830 753 aa4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 ANKRD28O15084 1053 aa4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 RRP8O43159 456 aaKnown RBP4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 FYNP06241 537 aa4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 PFKFB1P16118 471 aa4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 RFX2P48378 723 aa4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 CLCNKAP51800 687 aa4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 SNRPEP62304 92 aaKnown RBP4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 ABATP80404 500 aa4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 ROR2Q01974 943 aaKnown RBP4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 TFCP2Q12800 502 aa4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 SCARB2Q14108 478 aa4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 DECR1Q16698 335 aa4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 KRT39Q6A163 491 aa4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 PAPD4Q6PIY7 484 aaKnown RBP4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 TPRG1Q6ZUI0 275 aa4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 FJX1Q86VR8 437 aa4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 NRROSQ86YC3 692 aa4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 GOT1L1Q8NHS2 421 aaPredicted RBP4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 WDR20Q8TBZ3 569 aa4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 TAS1R2Q8TE23 839 aa4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 TAAR8Q969N4 342 aa4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 HDAC11Q96DB2 347 aa4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 SPACA9Q96E40 222 aaPredicted RBP4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 JAKMIP1Q96N16 626 aaKnown RBP4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 DACH2Q96NX9 599 aa4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 GPR88Q9GZN0 384 aa4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 WDR26Q9H7D7 661 aa4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 HOXC10Q9NYD6 342 aa4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 DDX25Q9UHL0 483 aaKnown RBP4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 TUBE1Q9UJT0 475 aa4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 WBP11Q9Y2W2 641 aaKnown RBP4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 ABCA7Q8IZY2 2146 aa4.69□□□□□ -1.66
SSX2IP-208ENST00000490476 MYH8P13535 1937 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 ARHGEF37A1IGU5 675 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 TRABD2BA6NFA1 517 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 FAM90A26D6RGX4 464 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 PLK4O00444 970 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 KCNN4O15554 427 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 NDUFS4O43181 175 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 PRAMEF11O60813 436 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 CREG1O75629 220 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 PENKP01210 267 aaPredicted RBP4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 UGT1A1P22309 533 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 NR2F2P24468 414 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 PTAFRP25105 342 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 HOXD3P31249 432 aaPredicted RBP4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 PRKAR2BP31323 418 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 CTNNA1P35221 906 aaKnown RBP4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 TNNT3P45378 269 aaPredicted RBP4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 RAB28P51157 221 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 CLDN20P56880 219 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 NANOS3P60323 173 aaKnown RBP4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 SEC61BP60468 96 aaKnown RBP4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 COG7P83436 770 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 PDE1BQ01064 536 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 DHX34Q14147 1143 aaKnown RBP4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 MVPQ14764 893 aaKnown RBP4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 SMN1Q16637 294 aaKnown RBP4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 SYT16Q17RD7 645 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 ARMC4Q5T2S8 1044 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 RBPMS2Q6ZRY4 209 aaKnown RBP4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 CENPVQ7Z7K6 275 aaPredicted RBP4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 TMEM173Q86WV6 379 aaPredicted RBP4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 OR8H3Q8N146 312 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 PI4KAP1Q8N8J0 262 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 XXYLT1Q8NBI6 393 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 SPATA3Q8NHX4 192 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 SLC44A1Q8WWI5 657 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 SEPT8Q92599 483 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 MTBPQ96DY7 904 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 C3orf30Q96M34 536 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 RAB3IPQ96QF0 476 aaPredicted RBP4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 GFI1Q99684 422 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 SLC25A33Q9BSK2 321 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 NUP85Q9BW27 656 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 DCLK3Q9C098 648 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 HIF1ANQ9NWT6 349 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 DOCK6Q96HP0 2047 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 LCTP09848 1927 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 MYH1P12882 1939 aa4.68□□□□□ -1.66
SSX2IP-208ENST00000490476 TNRC6BQ9UPQ9 1833 aaKnown RBP4.67□□□□□ -1.66
SSX2IP-208ENST00000490476 N4BP1O75113 896 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms