RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 ZNF75DP51815 510 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 MAPK12P53778 367 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 NAP1L1P55209 391 aaKnown RBP3□□□□□ -1.93
HMGN1-218ENST00000490032 SNAPC1Q16533 368 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 MCMDC2Q4G0Z9 681 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 FAM205BPQ63HN1 556 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 PHC2Q8IXK0 858 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 NDUFAF2Q8N183 169 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 OR7A2PQ8NGA2 310 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 OR10Q1Q8NGQ4 319 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 CFAP61Q8NHU2 1237 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 C9orf43Q8TAL5 461 aaPredicted RBP3□□□□□ -1.93
HMGN1-218ENST00000490032 ZPLD1Q8TCW7 415 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 ATP8B4Q8TF62 1192 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 CHPT1Q8WUD6 406 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 TMCO6Q96DC7 493 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 CNRIP1Q96F85 164 aaPredicted RBP3□□□□□ -1.93
HMGN1-218ENST00000490032 C1orf147Q96MC9 270 aaPredicted RBP3□□□□□ -1.93
HMGN1-218ENST00000490032 MAP3K3Q99759 626 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 TDRD1Q9BXT4 1180 aaKnown RBP3□□□□□ -1.93
HMGN1-218ENST00000490032 NYXQ9GZU5 481 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 ZMYND12Q9H0C1 365 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 TUBB1Q9H4B7 451 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 MTHFD2LQ9H903 347 aaPredicted RBP3□□□□□ -1.93
HMGN1-218ENST00000490032 BLOC1S4Q9NUP1 217 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 TBC1D29Q9UFV1 150 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 VPS28Q9UK41 221 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 WDR83OSQ9Y284 106 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 IGHV4-30-2A0A087WSY4 118 aa2.99□□□□□ -1.93
HMGN1-218ENST00000490032 A8MXK9 166 aa2.99□□□□□ -1.93
HMGN1-218ENST00000490032 KLLNB2CW77 178 aa2.99□□□□□ -1.93
HMGN1-218ENST00000490032 C2CD4DB7Z1M9 353 aa2.99□□□□□ -1.93
HMGN1-218ENST00000490032 IGKV3-15P01624 115 aa2.99□□□□□ -1.93
HMGN1-218ENST00000490032 PRKAR1AP10644 381 aa2.99□□□□□ -1.93
HMGN1-218ENST00000490032 IRF2P14316 349 aa2.99□□□□□ -1.93
HMGN1-218ENST00000490032 ALOX12P18054 663 aa2.99□□□□□ -1.93
HMGN1-218ENST00000490032 BCL3P20749 454 aa2.99□□□□□ -1.93
HMGN1-218ENST00000490032 PDHA2P29803 388 aa2.99□□□□□ -1.93
HMGN1-218ENST00000490032 ETV5P41161 510 aa2.99□□□□□ -1.93
HMGN1-218ENST00000490032 OR3A2P47893 321 aa2.99□□□□□ -1.93
HMGN1-218ENST00000490032 ZFP36L2P47974 494 aaKnown RBP2.99□□□□□ -1.93
HMGN1-218ENST00000490032 DNA2P51530 1060 aa2.99□□□□□ -1.93
HMGN1-218ENST00000490032 ZFP36L1Q07352 338 aaKnown RBP2.99□□□□□ -1.93
HMGN1-218ENST00000490032 WTAPQ15007 396 aa2.99□□□□□ -1.93
HMGN1-218ENST00000490032 PTPN14Q15678 1187 aa2.99□□□□□ -1.93
HMGN1-218ENST00000490032 GPR33Q49SQ1 333 aa2.99□□□□□ -1.93
HMGN1-218ENST00000490032 SEL1L3Q68CR1 1132 aa2.99□□□□□ -1.93
HMGN1-218ENST00000490032 IL17RELQ6ZVW7 336 aa2.99□□□□□ -1.93
HMGN1-218ENST00000490032 ZER1Q7Z7L7 766 aa2.99□□□□□ -1.93
HMGN1-218ENST00000490032 ADGRA1Q86SQ6 560 aa2.99□□□□□ -1.93
HMGN1-218ENST00000490032 ZNF584Q8IVC4 421 aa2.99□□□□□ -1.93
HMGN1-218ENST00000490032 FAM89BQ8N5H3 189 aa2.99□□□□□ -1.93
HMGN1-218ENST00000490032 OR4K1Q8NGD4 311 aa2.99□□□□□ -1.93
HMGN1-218ENST00000490032 NPRL2Q8WTW4 380 aa2.99□□□□□ -1.93
HMGN1-218ENST00000490032 NXNL1Q96CM4 212 aa2.99□□□□□ -1.93
HMGN1-218ENST00000490032 FAM71F1Q96KD3 344 aaPredicted RBP2.99□□□□□ -1.93
HMGN1-218ENST00000490032 CCDC3Q9BQI4 270 aa2.99□□□□□ -1.93
HMGN1-218ENST00000490032 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.99□□□□□ -1.93
HMGN1-218ENST00000490032 THAP10Q9P2Z0 257 aaPredicted RBP2.99□□□□□ -1.93
HMGN1-218ENST00000490032 ADD3Q9UEY8 706 aaKnown RBP2.99□□□□□ -1.93
HMGN1-218ENST00000490032 IL17BQ9UHF5 180 aa2.99□□□□□ -1.93
HMGN1-218ENST00000490032 hCG_1807616A0A1W2PRN6 198 aa2.98□□□□□ -1.93
HMGN1-218ENST00000490032 NPIPB9F8W1W9 429 aa2.98□□□□□ -1.93
HMGN1-218ENST00000490032 G3V2L1 256 aa2.98□□□□□ -1.93
HMGN1-218ENST00000490032 K7EQD1 137 aa2.98□□□□□ -1.93
HMGN1-218ENST00000490032 PTGESO14684 152 aa2.98□□□□□ -1.93
HMGN1-218ENST00000490032 SNAP91O60641 907 aa2.98□□□□□ -1.93
HMGN1-218ENST00000490032 CAPGP40121 348 aa2.98□□□□□ -1.93
HMGN1-218ENST00000490032 SRSF9Q13242 221 aaKnown RBP eCLIP2.98□□□□□ -1.93
HMGN1-218ENST00000490032 TMEM132DQ14C87 1099 aa2.98□□□□□ -1.93
HMGN1-218ENST00000490032 MEA1Q16626 185 aa2.98□□□□□ -1.93
HMGN1-218ENST00000490032 OR4A47Q6IF82 309 aa2.98□□□□□ -1.93
HMGN1-218ENST00000490032 LCLAT1Q6UWP7 414 aa2.98□□□□□ -1.93
HMGN1-218ENST00000490032 FAM131BQ86XD5 332 aa2.98□□□□□ -1.93
HMGN1-218ENST00000490032 C11orf53Q8IXP5 236 aa2.98□□□□□ -1.93
HMGN1-218ENST00000490032 TAGAPQ8N103 731 aa2.98□□□□□ -1.93
HMGN1-218ENST00000490032 TSPAN14Q8NG11 270 aa2.98□□□□□ -1.93
HMGN1-218ENST00000490032 TOMM40LQ969M1 308 aa2.98□□□□□ -1.93
HMGN1-218ENST00000490032 CALML4Q96GE6 196 aa2.98□□□□□ -1.93
HMGN1-218ENST00000490032 RSRC1Q96IZ7 334 aaKnown RBP2.98□□□□□ -1.93
HMGN1-218ENST00000490032 C2orf48Q96LS8 159 aa2.98□□□□□ -1.93
HMGN1-218ENST00000490032 ZNF577Q9BSK1 485 aa2.98□□□□□ -1.93
HMGN1-218ENST00000490032 KRTAP4-3Q9BYR4 195 aa2.98□□□□□ -1.93
HMGN1-218ENST00000490032 HEXA-AS1Q9H8Q6 139 aa2.98□□□□□ -1.93
HMGN1-218ENST00000490032 ANKZF1Q9H8Y5 726 aa2.98□□□□□ -1.93
HMGN1-218ENST00000490032 TBC1D22BQ9NU19 505 aa2.98□□□□□ -1.93
HMGN1-218ENST00000490032 DDX25Q9UHL0 483 aaKnown RBP2.98□□□□□ -1.93
HMGN1-218ENST00000490032 TSPAN16Q9UKR8 245 aa2.98□□□□□ -1.93
HMGN1-218ENST00000490032 CHKBQ9Y259 395 aa2.98□□□□□ -1.93
HMGN1-218ENST00000490032 A0A1W2PPM1 405 aa2.97□□□□□ -1.93
HMGN1-218ENST00000490032 ATP1B1P05026 303 aa2.97□□□□□ -1.93
HMGN1-218ENST00000490032 MYOGP15173 224 aa2.97□□□□□ -1.93
HMGN1-218ENST00000490032 PORP16435 677 aaPredicted RBP2.97□□□□□ -1.93
HMGN1-218ENST00000490032 ELAVL4P26378 380 aaKnown RBP2.97□□□□□ -1.93
HMGN1-218ENST00000490032 CDC25CP30307 473 aa2.97□□□□□ -1.93
HMGN1-218ENST00000490032 CD300CQ08708 224 aa2.97□□□□□ -1.93
HMGN1-218ENST00000490032 SGCGQ13326 291 aa2.97□□□□□ -1.93
HMGN1-218ENST00000490032 TRA2AQ13595 282 aaKnown RBP eCLIP2.97□□□□□ -1.938e-24■■□□□ 11.7
HMGN1-218ENST00000490032 CUL3Q13618 768 aa2.97□□□□□ -1.93
HMGN1-218ENST00000490032 CUL4AQ13619 759 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms