RNA–Protein interactions for RNA: ENST00000489240.1

C9orf16-203, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 3

Gene C9orf16, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-203ENST00000489240 WDR34Q96EX3 536 aa17.55■□□□□ 0.4
C9orf16-203ENST00000489240 CDK15Q96Q40 435 aa17.55■□□□□ 0.4
C9orf16-203ENST00000489240 OR2A14Q96R47 310 aa17.55■□□□□ 0.4
C9orf16-203ENST00000489240 EFCAB11Q9BUY7 163 aa17.55■□□□□ 0.4
C9orf16-203ENST00000489240 SLC29A3Q9BZD2 475 aa17.55■□□□□ 0.4
C9orf16-203ENST00000489240 RAB33BQ9H082 229 aa17.55■□□□□ 0.4
C9orf16-203ENST00000489240 PARD6AQ9NPB6 346 aa17.55■□□□□ 0.4
C9orf16-203ENST00000489240 TMEM184CQ9NVA4 438 aa17.55■□□□□ 0.4
C9orf16-203ENST00000489240 PNPOQ9NVS9 261 aa17.55■□□□□ 0.4
C9orf16-203ENST00000489240 ZNF225Q9UK10 706 aa17.55■□□□□ 0.4
C9orf16-203ENST00000489240 BTBD3Q9Y2F9 522 aa17.55■□□□□ 0.4
C9orf16-203ENST00000489240 U3KQA8 63 aa17.55■□□□□ 0.4
C9orf16-203ENST00000489240 GOLGA4Q13439 2230 aaKnown RBP17.55■□□□□ 0.4
C9orf16-203ENST00000489240 IGHV1OR21-1A0A087WYE8 117 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 A0A1B0GTL3 188 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 DUX1O43812 170 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 LDOC1O95751 146 aaPredicted RBP17.54■□□□□ 0.4
C9orf16-203ENST00000489240 CHEK2O96017 543 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 KITP10721 976 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 MYF5P13349 255 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 JUPP14923 745 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 CXCR2P25025 360 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 HMOX2P30519 316 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 CCR8P51685 355 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 CBX1P83916 185 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 HIST2H2ACQ16777 129 aaPredicted RBP17.54■□□□□ 0.4
C9orf16-203ENST00000489240 PAGE2BQ5JRK9 111 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 CATSPEREQ5SY80 951 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 KANK2Q63ZY3 851 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 HIST2H2AA3Q6FI13 130 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 GRHL2Q6ISB3 625 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 GUSBP11Q6P575 273 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 SPESP1Q6UW49 350 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 CDYL2Q8N8U2 506 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 ABHD11Q8NFV4 315 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 FLVCR1-AS1Q8TAF5 88 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 METTL6Q8TCB7 284 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 RHBDD1Q8TEB9 315 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 TRIM55Q9BYV6 548 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 VTI1BQ9UEU0 232 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 POMT2Q9UKY4 750 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 SNX7Q9UNH6 387 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 SH2B3Q9UQQ2 575 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 RNF11Q9Y3C5 154 aa17.54■□□□□ 0.4
C9orf16-203ENST00000489240 PRAMEF4O60810 478 aa17.53■□□□□ 0.4
C9orf16-203ENST00000489240 CAPN1P07384 714 aa17.53■□□□□ 0.4
C9orf16-203ENST00000489240 CD59P13987 128 aa17.53■□□□□ 0.4
C9orf16-203ENST00000489240 DRD4P21917 467 aa17.53■□□□□ 0.4
C9orf16-203ENST00000489240 OR1D5P58170 312 aa17.53■□□□□ 0.4
C9orf16-203ENST00000489240 PRAMEF9Q5VWM5 478 aa17.53■□□□□ 0.4
C9orf16-203ENST00000489240 SPRED1Q7Z699 444 aa17.53■□□□□ 0.4
C9orf16-203ENST00000489240 KRT78Q8N1N4 520 aa17.53■□□□□ 0.4
C9orf16-203ENST00000489240 DCBLD1Q8N8Z6 715 aa17.53■□□□□ 0.4
C9orf16-203ENST00000489240 Q8N9G6 341 aaPredicted RBP17.53■□□□□ 0.4
C9orf16-203ENST00000489240 UBE2E3Q969T4 207 aa17.53■□□□□ 0.4
C9orf16-203ENST00000489240 CNDP2Q96KP4 475 aaKnown RBP17.53■□□□□ 0.4
C9orf16-203ENST00000489240 AIF1LQ9BQI0 150 aa17.53■□□□□ 0.4
C9orf16-203ENST00000489240 SIKE1Q9BRV8 207 aa17.53■□□□□ 0.4
C9orf16-203ENST00000489240 PITHD1Q9GZP4 211 aaPredicted RBP17.53■□□□□ 0.4
C9orf16-203ENST00000489240 TNFRSF12AQ9NP84 129 aa17.53■□□□□ 0.4
C9orf16-203ENST00000489240 PFDN4Q9NQP4 134 aa17.53■□□□□ 0.4
C9orf16-203ENST00000489240 CUEDC1Q9NWM3 386 aaPredicted RBP17.53■□□□□ 0.4
C9orf16-203ENST00000489240 ANKMY1Q9P2S6 941 aa17.53■□□□□ 0.4
C9orf16-203ENST00000489240 FTSJ1Q9UET6 329 aa17.53■□□□□ 0.4
C9orf16-203ENST00000489240 MARCOQ9UEW3 520 aaPredicted RBP17.53■□□□□ 0.4
C9orf16-203ENST00000489240 EPHA6Q9UF33 1036 aa17.53■□□□□ 0.4
C9orf16-203ENST00000489240 SNX6Q9UNH7 406 aa17.53■□□□□ 0.4
C9orf16-203ENST00000489240 FIS1Q9Y3D6 152 aa17.53■□□□□ 0.4
C9orf16-203ENST00000489240 MDC1Q14676 2089 aaKnown RBP17.52■□□□□ 0.4
C9orf16-203ENST00000489240 RP1P56715 2156 aa17.52■□□□□ 0.4
C9orf16-203ENST00000489240 A0A0J9YY10 115 aa17.52■□□□□ 0.4
C9orf16-203ENST00000489240 B4GAT1O43505 415 aa17.52■□□□□ 0.4
C9orf16-203ENST00000489240 KRT6AP02538 564 aa17.52■□□□□ 0.4
C9orf16-203ENST00000489240 KRT6BP04259 564 aa17.52■□□□□ 0.4
C9orf16-203ENST00000489240 CKMT2P17540 419 aa17.52■□□□□ 0.4
C9orf16-203ENST00000489240 TGM1P22735 817 aa17.52■□□□□ 0.4
C9orf16-203ENST00000489240 VARSP26640 1264 aaKnown RBP17.52■□□□□ 0.4
C9orf16-203ENST00000489240 KRT6CP48668 564 aa17.52■□□□□ 0.4
C9orf16-203ENST00000489240 SLBPQ14493 270 aaKnown RBP eCLIP17.52■□□□□ 0.4
C9orf16-203ENST00000489240 CPSF6Q16630 551 aaKnown RBP eCLIP17.52■□□□□ 0.4
C9orf16-203ENST00000489240 PERM1Q5SV97 790 aa17.52■□□□□ 0.4
C9orf16-203ENST00000489240 KIAA1614Q5VZ46 1190 aa17.52■□□□□ 0.4
C9orf16-203ENST00000489240 CLEC6AQ6EIG7 209 aa17.52■□□□□ 0.4
C9orf16-203ENST00000489240 IRGCQ6NXR0 463 aa17.52■□□□□ 0.4
C9orf16-203ENST00000489240 NAXDQ8IW45 347 aa17.52■□□□□ 0.4
C9orf16-203ENST00000489240 TBC1D19Q8N5T2 526 aa17.52■□□□□ 0.4
C9orf16-203ENST00000489240 OR4K1Q8NGD4 311 aa17.52■□□□□ 0.4
C9orf16-203ENST00000489240 NCSTNQ92542 709 aa17.52■□□□□ 0.4
C9orf16-203ENST00000489240 REPS1Q96D71 796 aa17.52■□□□□ 0.4
C9orf16-203ENST00000489240 ZDHHC12Q96GR4 267 aa17.52■□□□□ 0.4
C9orf16-203ENST00000489240 KCNA7Q96RP8 456 aa17.52■□□□□ 0.4
C9orf16-203ENST00000489240 CD180Q99467 661 aa17.52■□□□□ 0.4
C9orf16-203ENST00000489240 DPH7Q9BTV6 452 aa17.52■□□□□ 0.4
C9orf16-203ENST00000489240 FAM107BQ9H098 131 aa17.52■□□□□ 0.4
C9orf16-203ENST00000489240 ABCG4Q9H172 646 aa17.52■□□□□ 0.4
C9orf16-203ENST00000489240 SLC6A20Q9NP91 592 aa17.52■□□□□ 0.4
C9orf16-203ENST00000489240 RXFP3Q9NSD7 469 aa17.52■□□□□ 0.4
C9orf16-203ENST00000489240 PSD3Q9NYI0 1048 aa17.52■□□□□ 0.4
C9orf16-203ENST00000489240 PCDHGA11Q9Y5H2 935 aa17.52■□□□□ 0.4
C9orf16-203ENST00000489240 USH1CQ9Y6N9 552 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 539.4 ms