RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 PHF2O75151 1096 aa17.54■□□□□ 0.4
HDAC6-231ENST00000488905 USP1O94782 785 aa17.54■□□□□ 0.4
HDAC6-231ENST00000488905 ESR1P03372 595 aa17.54■□□□□ 0.4
HDAC6-231ENST00000488905 EMP3P54852 163 aa17.54■□□□□ 0.4
HDAC6-231ENST00000488905 ADARP55265 1226 aaKnown RBP17.54■□□□□ 0.4
HDAC6-231ENST00000488905 PER3P56645 1201 aa17.54■□□□□ 0.4
HDAC6-231ENST00000488905 ARF3P61204 181 aaPredicted RBP17.54■□□□□ 0.4
HDAC6-231ENST00000488905 DSG2Q14126 1118 aa17.54■□□□□ 0.4
HDAC6-231ENST00000488905 RPS6KA1Q15418 735 aa17.54■□□□□ 0.4
HDAC6-231ENST00000488905 ANKRD20A4Q4UJ75 823 aa17.54■□□□□ 0.4
HDAC6-231ENST00000488905 MEI1Q5TIA1 1274 aa17.54■□□□□ 0.4
HDAC6-231ENST00000488905 ATG9BQ674R7 924 aa17.54■□□□□ 0.4
HDAC6-231ENST00000488905 SUSD1Q6UWL2 747 aa17.54■□□□□ 0.4
HDAC6-231ENST00000488905 SDCCAG8Q86SQ7 713 aaPredicted RBP17.54■□□□□ 0.4
HDAC6-231ENST00000488905 KBTBD2Q8IY47 623 aa17.54■□□□□ 0.4
HDAC6-231ENST00000488905 SPC24Q8NBT2 197 aa17.54■□□□□ 0.4
HDAC6-231ENST00000488905 OR9A1PQ8NGU1 263 aa17.54■□□□□ 0.4
HDAC6-231ENST00000488905 SMPDL3AQ92484 453 aa17.54■□□□□ 0.4
HDAC6-231ENST00000488905 MVB12AQ96EY5 273 aa17.54■□□□□ 0.4
HDAC6-231ENST00000488905 LMF1Q96S06 567 aa17.54■□□□□ 0.4
HDAC6-231ENST00000488905 PLCD4Q9BRC7 762 aa17.54■□□□□ 0.4
HDAC6-231ENST00000488905 MRPS30Q9NP92 439 aaKnown RBP17.54■□□□□ 0.4
HDAC6-231ENST00000488905 C14orf105Q9NVL8 296 aa17.54■□□□□ 0.4
HDAC6-231ENST00000488905 SOX13Q9UN79 622 aa17.54■□□□□ 0.4
HDAC6-231ENST00000488905 DRG1Q9Y295 367 aaKnown RBP17.54■□□□□ 0.4
HDAC6-231ENST00000488905 APCP25054 2843 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 A0A1W2PQ72 361 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 IDSB3KWA1 339 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 MYO1CO00159 1063 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 PRPF4O43172 522 aaKnown RBP eCLIP17.53■□□□□ 0.4
HDAC6-231ENST00000488905 PRR35P0CG20 571 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 TPSB2P20231 275 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 OGNP20774 298 aaKnown RBP17.53■□□□□ 0.4
HDAC6-231ENST00000488905 FDXRP22570 491 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 CDC25BP30305 580 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 RPA3P35244 121 aaPredicted RBP17.53■□□□□ 0.4
HDAC6-231ENST00000488905 SOX11P35716 441 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 ARG2P78540 354 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 TPSAB1Q15661 275 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 KIAA0930Q6ICG6 404 aaPredicted RBP17.53■□□□□ 0.4
HDAC6-231ENST00000488905 RPUSD3Q6P087 351 aaKnown RBP17.53■□□□□ 0.4
HDAC6-231ENST00000488905 FBXO42Q6P3S6 717 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 LRRC8BQ6P9F7 803 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 NDUFAF7Q7L592 441 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 GSTA5Q7RTV2 222 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 PAQR7Q86WK9 346 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 TICAM1Q8IUC6 712 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 CSNK1A1LQ8N752 337 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 BCORP1Q8N888 145 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 CATSPER1Q8NEC5 780 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 TCF12Q99081 682 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 SYNPO2LQ9H987 977 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 FAM114A2Q9NRY5 505 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 OLAHQ9NV23 265 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 TRPC4Q9UBN4 977 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 CDC14AQ9UNH5 594 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 RUVBL1Q9Y265 456 aaKnown RBP17.53■□□□□ 0.4
HDAC6-231ENST00000488905 ZKSCAN5Q9Y2L8 839 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 CRYL1Q9Y2S2 319 aa17.53■□□□□ 0.4
HDAC6-231ENST00000488905 IGKV1-8A0A0C4DH67 115 aa17.52■□□□□ 0.4
HDAC6-231ENST00000488905 DYTNA2CJ06 578 aa17.52■□□□□ 0.4
HDAC6-231ENST00000488905 PSIP1O75475 530 aaKnown RBP17.52■□□□□ 0.4
HDAC6-231ENST00000488905 CHRM3P20309 590 aa17.52■□□□□ 0.4
HDAC6-231ENST00000488905 CDK16Q00536 496 aa17.52■□□□□ 0.4
HDAC6-231ENST00000488905 EEF1A2Q05639 463 aaKnown RBP17.52■□□□□ 0.4
HDAC6-231ENST00000488905 TSTA3Q13630 321 aaPredicted RBP17.52■□□□□ 0.4
HDAC6-231ENST00000488905 ARHGAP19Q14CB8 494 aa17.52■□□□□ 0.4
HDAC6-231ENST00000488905 HKDC1Q2TB90 917 aa17.52■□□□□ 0.4
HDAC6-231ENST00000488905 KLHL38Q2WGJ6 581 aa17.52■□□□□ 0.4
HDAC6-231ENST00000488905 ACSBG2Q5FVE4 666 aa17.52■□□□□ 0.4
HDAC6-231ENST00000488905 LAPTM4BQ86VI4 370 aa17.52■□□□□ 0.4
HDAC6-231ENST00000488905 AMER3Q8N944 861 aa17.52■□□□□ 0.4
HDAC6-231ENST00000488905 BRIX1Q8TDN6 353 aaKnown RBP17.52■□□□□ 0.4
HDAC6-231ENST00000488905 PSMF1Q92530 271 aa17.52■□□□□ 0.4
HDAC6-231ENST00000488905 PTGFRNQ9P2B2 879 aa17.52■□□□□ 0.4
HDAC6-231ENST00000488905 GALPQ9UBC7 116 aa17.52■□□□□ 0.4
HDAC6-231ENST00000488905 TAC3Q9UHF0 121 aa17.52■□□□□ 0.4
HDAC6-231ENST00000488905 IGHV1-45A0A0A0MS14 117 aa17.51■□□□□ 0.39
HDAC6-231ENST00000488905 TCRBV7S3A2A0A539 114 aa17.51■□□□□ 0.39
HDAC6-231ENST00000488905 ENO4A6NNW6 628 aa17.51■□□□□ 0.39
HDAC6-231ENST00000488905 E5RI56 91 aa17.51■□□□□ 0.39
HDAC6-231ENST00000488905 FFAR3O14843 346 aa17.51■□□□□ 0.39
HDAC6-231ENST00000488905 GPR42O15529 346 aa17.51■□□□□ 0.39
HDAC6-231ENST00000488905 CCNDBP1O95273 360 aa17.51■□□□□ 0.39
HDAC6-231ENST00000488905 CATP04040 527 aaKnown RBP17.51■□□□□ 0.39
HDAC6-231ENST00000488905 EZRP15311 586 aaKnown RBP17.51■□□□□ 0.39
HDAC6-231ENST00000488905 CXCR2P25025 360 aa17.51■□□□□ 0.39
HDAC6-231ENST00000488905 EMP2P54851 167 aa17.51■□□□□ 0.39
HDAC6-231ENST00000488905 INAQ16352 499 aa17.51■□□□□ 0.39
HDAC6-231ENST00000488905 GARNL3Q5VVW2 1013 aa17.51■□□□□ 0.39
HDAC6-231ENST00000488905 ICE2Q659A1 982 aa17.51■□□□□ 0.39
HDAC6-231ENST00000488905 ZNF425Q6IV72 752 aa17.51■□□□□ 0.39
HDAC6-231ENST00000488905 CILP2Q8IUL8 1156 aa17.51■□□□□ 0.39
HDAC6-231ENST00000488905 SIRT6Q8N6T7 355 aa17.51■□□□□ 0.39
HDAC6-231ENST00000488905 OR1N1Q8NGS0 311 aa17.51■□□□□ 0.39
HDAC6-231ENST00000488905 MAIP1Q8WWC4 291 aa17.51■□□□□ 0.39
HDAC6-231ENST00000488905 MMABQ96EY8 250 aaPredicted RBP17.51■□□□□ 0.39
HDAC6-231ENST00000488905 MAGEB10Q96LZ2 347 aaPredicted RBP17.51■□□□□ 0.39
HDAC6-231ENST00000488905 RIC8BQ9NVN3 520 aa17.51■□□□□ 0.39
HDAC6-231ENST00000488905 SCN3AQ9NY46 2000 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms