RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 GTF3C4Q9UKN8 822 aa2.9□□□□□ -1.95
CD46-215ENST00000488596 TCF19Q9Y242 345 aa2.9□□□□□ -1.95
CD46-215ENST00000488596 CHKBQ9Y259 395 aa2.9□□□□□ -1.95
CD46-215ENST00000488596 R4GN57 208 aa2.9□□□□□ -1.95
CD46-215ENST00000488596 ARID2Q68CP9 1835 aa2.9□□□□□ -1.95
CD46-215ENST00000488596 HTR3EA5X5Y0 456 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 SNURFLB1AK76 121 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 HHLA1C9JL84 531 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 WDR46O15213 610 aaKnown RBP2.89□□□□□ -1.95
CD46-215ENST00000488596 DFFBO76075 338 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 APOHP02749 345 aaPredicted RBP2.89□□□□□ -1.95
CD46-215ENST00000488596 HMBSP08397 361 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 CEACAM1P13688 526 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 KCNJ1P48048 391 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 LBX1P52954 281 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 NAGLUP54802 743 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 KLC1Q07866 573 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 ILF2Q12905 390 aaKnown RBP2.89□□□□□ -1.95
CD46-215ENST00000488596 BFSP1Q12934 665 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 TUBB2AQ13885 445 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 UGCGQ16739 394 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 C14orf177Q52M58 125 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 SUSD4Q5VX71 490 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 ARHGAP17Q68EM7 881 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 CYB5D1Q6P9G0 228 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 TMEM207Q6UWW9 146 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 IL17RELQ6ZVW7 336 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 APLFQ8IW19 511 aaPredicted RBP2.89□□□□□ -1.95
CD46-215ENST00000488596 KIRREL3Q8IZU9 778 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 RYBPQ8N488 228 aaPredicted RBP2.89□□□□□ -1.95
CD46-215ENST00000488596 CNBD1Q8NA66 436 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 TMEM178AQ8NBL3 297 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 NOA1Q8NC60 698 aaKnown RBP2.89□□□□□ -1.95
CD46-215ENST00000488596 OR13C3Q8NGS6 347 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 OR2T11Q8NH01 316 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 RAD54LQ92698 747 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 BSCL2Q96G97 398 aaPredicted RBP2.89□□□□□ -1.95
CD46-215ENST00000488596 CCDC114Q96M63 670 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 NDNQ99608 321 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 DESI2Q9BSY9 194 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 TUBB2BQ9BVA1 445 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 GFRA4Q9GZZ7 299 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 ATP13A3Q9H7F0 1226 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 MINDY3Q9H8M7 445 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 ZWILCHQ9H900 591 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 ZNF71Q9NQZ8 489 aaPredicted RBP2.89□□□□□ -1.95
CD46-215ENST00000488596 DDX43Q9NXZ2 648 aaKnown RBP2.89□□□□□ -1.95
CD46-215ENST00000488596 PPP2R2CQ9Y2T4 447 aa2.89□□□□□ -1.95
CD46-215ENST00000488596 DISP3Q9P2K9 1392 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 A0A087WV48 116 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 CDC123O75794 336 aaPredicted RBP2.88□□□□□ -1.95
CD46-215ENST00000488596 LUC7L3O95232 432 aaKnown RBP2.88□□□□□ -1.95
CD46-215ENST00000488596 SLU7O95391 586 aaKnown RBP2.88□□□□□ -1.95
CD46-215ENST00000488596 EML2O95834 649 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 TBX6O95947 436 aaPredicted RBP2.88□□□□□ -1.95
CD46-215ENST00000488596 CLPTM1O96005 669 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 RPN1P04843 607 aaKnown RBP2.88□□□□□ -1.95
CD46-215ENST00000488596 VIMP08670 466 aaKnown RBP2.88□□□□□ -1.95
CD46-215ENST00000488596 ANKRD34CP0C6C1 535 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 SPP1P10451 314 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 MYL6BP14649 208 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 GNB3P16520 340 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 ANOS1P23352 680 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 ALDH4A1P30038 563 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 TNNT3P45378 269 aaPredicted RBP2.88□□□□□ -1.95
CD46-215ENST00000488596 MFAP3P55082 362 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 HERV-K104P61576 105 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 GNB1P62873 340 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 TRAP1Q12931 704 aaKnown RBP2.88□□□□□ -1.95
CD46-215ENST00000488596 EXT1Q16394 746 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 ZNF876PQ49A33 203 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 GPR33Q49SQ1 333 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 ZRANB3Q5FWF4 1079 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 LCN1P1Q5VSP4 162 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 SHEQ5VZ18 495 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 FAM166AQ6J272 317 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 UGT3A1Q6NUS8 523 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 CTR9Q6PD62 1173 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 SPEM1Q8N4L4 309 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 SUSD6Q92537 303 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 CORO2AQ92828 525 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 MR1Q95460 341 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 PYCR2Q96C36 320 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 PGM2Q96G03 612 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 JAKMIP1Q96N16 626 aaKnown RBP2.88□□□□□ -1.95
CD46-215ENST00000488596 NECTIN4Q96NY8 510 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 INPP5KQ9BT40 448 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 RIMS4Q9H426 269 aaPredicted RBP2.88□□□□□ -1.95
CD46-215ENST00000488596 ZNF696Q9H7X3 374 aa2.88□□□□□ -1.95
CD46-215ENST00000488596 PHPT1Q9NRX4 125 aaPredicted RBP2.88□□□□□ -1.95
CD46-215ENST00000488596 IGHV4-4A0A075B6R2 117 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 C5orf52A6NGY3 159 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 MSGN1A6NI15 193 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 EPHB6O15197 1021 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 ST8SIA3O43173 380 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 PPIP5K2O43314 1243 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 EXTL3O43909 919 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 SELENOFO60613 162 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 FCGR3BO75015 233 aa2.87□□□□□ -1.95
CD46-215ENST00000488596 PGLSO95336 258 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms