RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 ZNF304Q9HCX3 659 aa22.06■■□□□ 1.12
CUL4A-209ENST00000488558 ATP13A2Q9NQ11 1180 aa22.06■■□□□ 1.12
CUL4A-209ENST00000488558 CTSFQ9UBX1 484 aa22.06■■□□□ 1.12
CUL4A-209ENST00000488558 ZC3H7BQ9UGR2 993 aaKnown RBP22.06■■□□□ 1.12
CUL4A-209ENST00000488558 TAC3Q9UHF0 121 aa22.06■■□□□ 1.12
CUL4A-209ENST00000488558 HEATR5BQ9P2D3 2071 aa22.06■■□□□ 1.12
CUL4A-209ENST00000488558 IPO13O94829 963 aaKnown RBP22.05■■□□□ 1.12
CUL4A-209ENST00000488558 MED26O95402 600 aa22.05■■□□□ 1.12
CUL4A-209ENST00000488558 ATXN8OSP0DMR3 200 aa22.05■■□□□ 1.12
CUL4A-209ENST00000488558 IVDP26440 423 aa22.05■■□□□ 1.12
CUL4A-209ENST00000488558 OR1D4P47884 311 aa22.05■■□□□ 1.12
CUL4A-209ENST00000488558 AIMP2Q13155 320 aaKnown RBP22.05■■□□□ 1.12
CUL4A-209ENST00000488558 GALNT7Q86SF2 657 aa22.05■■□□□ 1.12
CUL4A-209ENST00000488558 TMEM151BQ8IW70 566 aa22.05■■□□□ 1.12
CUL4A-209ENST00000488558 LRRC56Q8IYG6 542 aaPredicted RBP22.05■■□□□ 1.12
CUL4A-209ENST00000488558 RBMXL3Q8N7X1 1067 aaKnown RBP22.05■■□□□ 1.12
CUL4A-209ENST00000488558 GALNT11Q8NCW6 608 aa22.05■■□□□ 1.12
CUL4A-209ENST00000488558 VPS50Q96JG6 964 aa22.05■■□□□ 1.12
CUL4A-209ENST00000488558 C10orf90Q96M02 699 aa22.05■■□□□ 1.12
CUL4A-209ENST00000488558 RUNDC3BQ96NL0 473 aa22.05■■□□□ 1.12
CUL4A-209ENST00000488558 SEMA3GQ9NS98 782 aa22.05■■□□□ 1.12
CUL4A-209ENST00000488558 TRMT6Q9UJA5 497 aaKnown RBP22.05■■□□□ 1.12
CUL4A-209ENST00000488558 CDC23Q9UJX2 597 aa22.05■■□□□ 1.12
CUL4A-209ENST00000488558 MAP4K5Q9Y4K4 846 aa22.05■■□□□ 1.12
CUL4A-209ENST00000488558 H0YGG7 62 aa22.04■■□□□ 1.12
CUL4A-209ENST00000488558 SMAPO00193 183 aa22.04■■□□□ 1.12
CUL4A-209ENST00000488558 VARSP26640 1264 aaKnown RBP22.04■■□□□ 1.12
CUL4A-209ENST00000488558 ARF3P61204 181 aaPredicted RBP22.04■■□□□ 1.12
CUL4A-209ENST00000488558 MORF4L2Q15014 288 aa22.04■■□□□ 1.12
CUL4A-209ENST00000488558 GARNL3Q5VVW2 1013 aa22.04■■□□□ 1.12
CUL4A-209ENST00000488558 SLC6A19Q695T7 634 aa22.04■■□□□ 1.12
CUL4A-209ENST00000488558 UBE2R2Q712K3 238 aaPredicted RBP22.04■■□□□ 1.12
CUL4A-209ENST00000488558 PIWIL4Q7Z3Z4 852 aaKnown RBP22.04■■□□□ 1.12
CUL4A-209ENST00000488558 Q8NA96 180 aa22.04■■□□□ 1.12
CUL4A-209ENST00000488558 TAS2R13Q9NYV9 303 aa22.04■■□□□ 1.12
CUL4A-209ENST00000488558 HS3ST3B1Q9Y662 390 aa22.04■■□□□ 1.12
CUL4A-209ENST00000488558 LRRK2Q5S007 2527 aa22.04■■□□□ 1.12
CUL4A-209ENST00000488558 IGLV3-12A0A075B6K2 115 aa22.03■■□□□ 1.12
CUL4A-209ENST00000488558 SOCS6O14544 535 aa22.03■■□□□ 1.12
CUL4A-209ENST00000488558 PRPF4O43172 522 aaKnown RBP eCLIP22.03■■□□□ 1.126e-10■■■■□ 21.4
CUL4A-209ENST00000488558 SYF2O95926 243 aaKnown RBP22.03■■□□□ 1.12
CUL4A-209ENST00000488558 EIF2S1P05198 315 aaKnown RBP22.03■■□□□ 1.12
CUL4A-209ENST00000488558 IMPA1P29218 277 aa22.03■■□□□ 1.12
CUL4A-209ENST00000488558 CARSP49589 748 aaKnown RBP22.03■■□□□ 1.12
CUL4A-209ENST00000488558 RGS4P49798 205 aa22.03■■□□□ 1.12
CUL4A-209ENST00000488558 SP140Q13342 867 aa22.03■■□□□ 1.12
CUL4A-209ENST00000488558 TSTA3Q13630 321 aaPredicted RBP22.03■■□□□ 1.12
CUL4A-209ENST00000488558 RAPSNQ13702 412 aa22.03■■□□□ 1.12
CUL4A-209ENST00000488558 UBAP2LQ14157 1087 aaKnown RBP22.03■■□□□ 1.12
CUL4A-209ENST00000488558 MSS51Q4VC12 460 aa22.03■■□□□ 1.12
CUL4A-209ENST00000488558 METTL27Q8N6F8 245 aaPredicted RBP22.03■■□□□ 1.12
CUL4A-209ENST00000488558 CSNK1A1LQ8N752 337 aa22.03■■□□□ 1.12
CUL4A-209ENST00000488558 PPFIBP2Q8ND30 876 aa22.03■■□□□ 1.12
CUL4A-209ENST00000488558 TM9SF4Q92544 642 aa22.03■■□□□ 1.12
CUL4A-209ENST00000488558 CERS2Q96G23 380 aa22.03■■□□□ 1.12
CUL4A-209ENST00000488558 CABS1Q96KC9 395 aa22.03■■□□□ 1.12
CUL4A-209ENST00000488558 OR2A5Q96R48 311 aa22.03■■□□□ 1.12
CUL4A-209ENST00000488558 ZNF552Q9H707 407 aaPredicted RBP22.03■■□□□ 1.12
CUL4A-209ENST00000488558 ZNF282Q9UDV7 671 aaPredicted RBP22.03■■□□□ 1.12
CUL4A-209ENST00000488558 FBXL4Q9UKA2 621 aa22.03■■□□□ 1.12
CUL4A-209ENST00000488558 CDC14AQ9UNH5 594 aa22.03■■□□□ 1.12
CUL4A-209ENST00000488558 RELNP78509 3460 aa22.03■■□□□ 1.12
CUL4A-209ENST00000488558 MDC1Q14676 2089 aaKnown RBP22.03■■□□□ 1.12
CUL4A-209ENST00000488558 TXNDC9O14530 226 aa22.02■■□□□ 1.12
CUL4A-209ENST00000488558 VPS4BO75351 444 aa22.02■■□□□ 1.12
CUL4A-209ENST00000488558 C8GP07360 202 aa22.02■■□□□ 1.12
CUL4A-209ENST00000488558 HRH2P25021 359 aa22.02■■□□□ 1.12
CUL4A-209ENST00000488558 TIAL1Q01085 375 aaKnown RBP eCLIP22.02■■□□□ 1.12
CUL4A-209ENST00000488558 OCA2Q04671 838 aa22.02■■□□□ 1.12
CUL4A-209ENST00000488558 PRAMEF13Q5VWM6 474 aa22.02■■□□□ 1.12
CUL4A-209ENST00000488558 CREG2Q8IUH2 290 aa22.02■■□□□ 1.12
CUL4A-209ENST00000488558 PDIK1LQ8N165 341 aa22.02■■□□□ 1.12
CUL4A-209ENST00000488558 DTWD1Q8N5C7 304 aa22.02■■□□□ 1.12
CUL4A-209ENST00000488558 RERGQ96A58 199 aaPredicted RBP22.02■■□□□ 1.12
CUL4A-209ENST00000488558 COL26A1Q96A83 441 aa22.02■■□□□ 1.12
CUL4A-209ENST00000488558 LRRC39Q96DD0 335 aa22.02■■□□□ 1.12
CUL4A-209ENST00000488558 NDNQ99608 321 aa22.02■■□□□ 1.12
CUL4A-209ENST00000488558 SOX17Q9H6I2 414 aaPredicted RBP22.02■■□□□ 1.12
CUL4A-209ENST00000488558 SLAMF7Q9NQ25 335 aa22.02■■□□□ 1.12
CUL4A-209ENST00000488558 VPS4AQ9UN37 437 aa22.02■■□□□ 1.12
CUL4A-209ENST00000488558 RUVBL1Q9Y265 456 aaKnown RBP22.02■■□□□ 1.12
CUL4A-209ENST00000488558 MAU2Q9Y6X3 613 aa22.02■■□□□ 1.12
CUL4A-209ENST00000488558 SHANK1Q9Y566 2161 aa22.01■■□□□ 1.11
CUL4A-209ENST00000488558 USP27XA6NNY8 438 aa22.01■■□□□ 1.11
CUL4A-209ENST00000488558 SLC16A5O15375 505 aa22.01■■□□□ 1.11
CUL4A-209ENST00000488558 BANF1O75531 89 aa22.01■■□□□ 1.11
CUL4A-209ENST00000488558 FBLP22087 321 aaKnown RBP22.01■■□□□ 1.11
CUL4A-209ENST00000488558 GABRB3P28472 473 aa22.01■■□□□ 1.11
CUL4A-209ENST00000488558 DR1Q01658 176 aa22.01■■□□□ 1.11
CUL4A-209ENST00000488558 DSG2Q14126 1118 aa22.01■■□□□ 1.11
CUL4A-209ENST00000488558 RBBP7Q16576 425 aa22.01■■□□□ 1.11
CUL4A-209ENST00000488558 BBS9Q3SYG4 887 aa22.01■■□□□ 1.11
CUL4A-209ENST00000488558 TUBB8Q3ZCM7 444 aa22.01■■□□□ 1.11
CUL4A-209ENST00000488558 KIRREL2Q6UWL6 708 aa22.01■■□□□ 1.11
CUL4A-209ENST00000488558 FAM26EQ8N5C1 309 aa22.01■■□□□ 1.11
CUL4A-209ENST00000488558 STT3BQ8TCJ2 826 aa22.01■■□□□ 1.11
CUL4A-209ENST00000488558 MCOLN3Q8TDD5 553 aa22.01■■□□□ 1.11
CUL4A-209ENST00000488558 MIEF2Q96C03 454 aa22.01■■□□□ 1.11
CUL4A-209ENST00000488558 PDLIM2Q96JY6 352 aa22.01■■□□□ 1.11
CUL4A-209ENST00000488558 CCDC138Q96M89 665 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms