RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 ZNF304Q9HCX3 659 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 CHRAC1Q9NRG0 131 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 ZNF282Q9UDV7 671 aaPredicted RBP8.15□□□□□ -1.1
PRKCB-208ENST00000487674 RUVBL2Q9Y230 463 aaKnown RBP8.15□□□□□ -1.1
PRKCB-208ENST00000487674 NFS1Q9Y697 457 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 MAU2Q9Y6X3 613 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 IGLV3-12A0A075B6K2 115 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 LOC105369274A0A096LPK9 316 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 LOC102723532A0A0G2JNH3 316 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 A0A0J9YVX5 310 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 A0A1W2PPV9 198 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 A0A1W2PQ72 361 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 OR2A25A4D2G3 310 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 KRT87PA6NCN2 255 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 H3BMM5 538 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 AP3B1O00203 1094 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 PRPF4O43172 522 aaKnown RBP eCLIP8.14□□□□□ -1.11
PRKCB-208ENST00000487674 NRP2O60462 931 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 VPS26AO75436 327 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 USP1O94782 785 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 MED26O95402 600 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 ZGLP1P0C6A0 271 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 ERGP11308 486 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 ETS1P14921 441 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 FBLP22087 321 aaKnown RBP8.14□□□□□ -1.11
PRKCB-208ENST00000487674 FDXRP22570 491 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 ARNTP27540 789 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 CMPK1P30085 196 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 EIF3BP55884 814 aaKnown RBP8.14□□□□□ -1.11
PRKCB-208ENST00000487674 SESN2P58004 480 aaPredicted RBP8.14□□□□□ -1.11
PRKCB-208ENST00000487674 CRADDP78560 199 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 Q0VFX4 171 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 SNX1Q13596 522 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 GBX1Q14549 363 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 INAQ16352 499 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 PRTGQ2VWP7 1150 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 CCSMST1Q4G0I0 132 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 CTSL3PQ5NE16 218 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 RNF187Q5TA31 235 aaPredicted RBP8.14□□□□□ -1.11
PRKCB-208ENST00000487674 MRNIPQ6NTE8 343 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 RPUSD3Q6P087 351 aaKnown RBP8.14□□□□□ -1.11
PRKCB-208ENST00000487674 C4orf22Q6V702 233 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 LINC00696Q6ZRV3 163 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 KBTBD2Q8IY47 623 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 OR4N4Q8N0Y3 316 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 DTWD1Q8N5C7 304 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 OTUD6BQ8N6M0 293 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 STT3BQ8TCJ2 826 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 MVB12AQ96EY5 273 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 C10orf90Q96M02 699 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 LMF1Q96S06 567 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 ZFYVE21Q9BQ24 234 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 TRIM56Q9BRZ2 755 aaKnown RBP8.14□□□□□ -1.11
PRKCB-208ENST00000487674 TSGA10Q9BZW7 698 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 ZNF160Q9HCG1 818 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 C14orf105Q9NVL8 296 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 C3orf18Q9UK00 162 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 CPAMD8Q8IZJ3 1885 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 ZGRF1Q86YA3 2104 aa8.14□□□□□ -1.11
PRKCB-208ENST00000487674 NSG1A0A0A6YYJ2 146 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 DYTNA2CJ06 578 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 PCDH17O14917 1159 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 PFDN6O15212 129 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 LRRTM2O43300 516 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 NIPSNAP2O75323 286 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 MATN4O95460 622 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 ESR1P03372 595 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 EIF2S1P05198 315 aaKnown RBP8.13□□□□□ -1.11
PRKCB-208ENST00000487674 ZSCAN5DPP0CG00 497 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 COX6A1P12074 109 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 NMBRP28336 390 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 RPL22P35268 128 aaKnown RBP8.13□□□□□ -1.11
PRKCB-208ENST00000487674 SOX11P35716 441 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 NPY2RP49146 381 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 ADARP55265 1226 aaKnown RBP8.13□□□□□ -1.11
PRKCB-208ENST00000487674 BASP1P80723 227 aaKnown RBP8.13□□□□□ -1.11
PRKCB-208ENST00000487674 ARHGAP19Q14CB8 494 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 TYSND1Q2T9J0 566 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.13□□□□□ -1.11
PRKCB-208ENST00000487674 ATG9BQ674R7 924 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 DRICH1Q6PGQ1 229 aaPredicted RBP8.13□□□□□ -1.11
PRKCB-208ENST00000487674 NDUFAF7Q7L592 441 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 SDCCAG8Q86SQ7 713 aaPredicted RBP8.13□□□□□ -1.11
PRKCB-208ENST00000487674 PRSS58Q8IYP2 241 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 SLC34A3Q8N130 599 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 CSNK1A1LQ8N752 337 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 BCORP1Q8N888 145 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 SMPDL3AQ92484 453 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 LPGAT1Q92604 370 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 C8orf44Q96CB5 159 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 CABS1Q96KC9 395 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 BIRC8Q96P09 236 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 PLCD4Q9BRC7 762 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 MESP1Q9BRJ9 268 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 DPH7Q9BTV6 452 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 KIFC1Q9BW19 673 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 RBSNQ9H1K0 784 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 FAM114A2Q9NRY5 505 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 OLAHQ9NV23 265 aa8.13□□□□□ -1.11
PRKCB-208ENST00000487674 RIC8BQ9NVN3 520 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms