RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 ANKRD20A8PQ5CZ79 823 aa3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 SLC35D3Q5M8T2 416 aa3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 ANKRD20A2Q5SQ80 823 aa3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 C20orf194Q5TEA3 1177 aa3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 STPG1Q5TH74 334 aa3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 ANKRD20A1Q5TYW2 823 aa3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 ANKRD20A3Q5VUR7 823 aa3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 SLC35E4Q6ICL7 350 aa3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 OR4A47Q6IF82 309 aa3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 RBMS3Q6XE24 437 aaKnown RBP3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 TRMT1LQ7Z2T5 733 aaKnown RBP3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 PIWIL3Q7Z3Z3 882 aaKnown RBP3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 TRPT1Q86TN4 253 aaKnown RBP3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 HOOK3Q86VS8 718 aa3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 AMIGO1Q86WK6 493 aa3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 IQCA1Q86XH1 822 aa3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 NHLRC2Q8NBF2 726 aa3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 SEPT1Q8WYJ6 367 aa3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 P2RX5Q93086 422 aa3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 TMEM143Q96AN5 459 aa3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 BSCL2Q96G97 398 aaPredicted RBP3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 UHRF2Q96PU4 802 aa3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 PARK7Q99497 189 aaKnown RBP3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 MTMR12Q9C0I1 747 aa3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 OR2B2Q9GZK3 357 aa3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 CPVLQ9H3G5 476 aa3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 MINDY3Q9H8M7 445 aa3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 CHST11Q9NPF2 352 aa3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 P4HTMQ9NXG6 502 aa3.2□□□□□ -1.9
SNRNP27-204ENST00000487029 IGSF1Q8N6C5 1336 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 IGHV4-61A0A0C4DH41 118 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 A4D1N5 150 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 SMIM1B2RUZ4 78 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 FLRT2O43155 660 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 PPIP5K2O43314 1243 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 SELENOFO60613 162 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 PRAF2O60831 178 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 IGHV4-59P01825 116 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 C9P02748 559 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 APOHP02749 345 aaPredicted RBP3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 LBPP18428 481 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 ITGA3P26006 1051 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 PSMB4P28070 264 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 CDX1P47902 265 aaPredicted RBP3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 HERV-K104P61576 105 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 TRAP1Q12931 704 aaKnown RBP3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 NFE2L1Q14494 772 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 SLMAPQ14BN4 828 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 HERC3Q15034 1050 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 NONOQ15233 471 aaKnown RBP eCLIP3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 RBBP7Q16576 425 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 PDLIM3Q53GG5 364 aaPredicted RBP3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 SUSD4Q5VX71 490 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 LYSMD4Q5XG99 296 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 CASC4Q6P4E1 433 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 C15orf39Q6ZRI6 1047 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 IL17RELQ6ZVW7 336 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 TMCO5AQ8N6Q1 288 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 OR13C3Q8NGS6 347 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 FIBINQ8TAL6 211 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 LRRC8CQ8TDW0 803 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 AFAP1L1Q8TED9 768 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 RIT1Q92963 219 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 PYCR2Q96C36 320 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 PGM2Q96G03 612 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 MAP3K3Q99759 626 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 DNAI2Q9GZS0 605 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 EGLN1Q9GZT9 426 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 ACTL8Q9H568 366 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 SIX2Q9NPC8 291 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 VPS18Q9P253 973 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 ZNF624Q9P2J8 865 aaPredicted RBP3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 LEF1Q9UJU2 399 aaPredicted RBP3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 LIPT1Q9Y234 373 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 HEG1Q9ULI3 1381 aa3.19□□□□□ -1.9
SNRNP27-204ENST00000487029 A0A0G2JLW4 131 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 DFFBO76075 338 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 TBX6O95947 436 aaPredicted RBP3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 EDN1P05305 212 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 STAG3L1P0CL83 205 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 GP1BBP13224 206 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 NKX2-1P43699 371 aaPredicted RBP3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 CACNG1Q06432 222 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 SULT2A1Q06520 285 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 P2RY6Q15077 328 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 KIAA1644Q3SXP7 199 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 XKR3Q5GH77 459 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 CYB5D1Q6P9G0 228 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 CTR9Q6PD62 1173 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 CEACAM20Q6UY09 585 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 GBP6Q6ZN66 633 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 LINC00696Q6ZRV3 163 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 MARK2Q7KZI7 788 aaKnown RBP3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 ANKRD33Q7Z3H0 272 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 DCUN1D3Q8IWE4 304 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 APCDD1Q8J025 514 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 NUP93Q8N1F7 819 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 ZNF843Q8N446 348 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 UXS1Q8NBZ7 420 aa3.18□□□□□ -1.9
SNRNP27-204ENST00000487029 OR10V1Q8NGI7 309 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms