RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 DOC2AQ14183 400 aa17.42■□□□□ 0.38
PDLIM7-207ENST00000486828 GRHL2Q6ISB3 625 aa17.42■□□□□ 0.38
PDLIM7-207ENST00000486828 AGTRAPQ6RW13 159 aa17.42■□□□□ 0.38
PDLIM7-207ENST00000486828 EP400NLQ6ZTU2 488 aa17.42■□□□□ 0.38
PDLIM7-207ENST00000486828 MRPL43Q8N983 215 aaKnown RBP17.42■□□□□ 0.38
PDLIM7-207ENST00000486828 TERB1Q8NA31 727 aa17.42■□□□□ 0.38
PDLIM7-207ENST00000486828 OR7A2PQ8NGA2 310 aa17.42■□□□□ 0.38
PDLIM7-207ENST00000486828 GLYATL1Q969I3 302 aa17.42■□□□□ 0.38
PDLIM7-207ENST00000486828 OTUB2Q96DC9 234 aa17.42■□□□□ 0.38
PDLIM7-207ENST00000486828 AMBRA1Q9C0C7 1298 aa17.42■□□□□ 0.38
PDLIM7-207ENST00000486828 MTG2Q9H4K7 406 aa17.42■□□□□ 0.38
PDLIM7-207ENST00000486828 STOX2Q9P2F5 926 aaPredicted RBP17.42■□□□□ 0.38
PDLIM7-207ENST00000486828 DKK3Q9UBP4 350 aa17.42■□□□□ 0.38
PDLIM7-207ENST00000486828 SAMD4AQ9UPU9 718 aaKnown RBP17.42■□□□□ 0.38
PDLIM7-207ENST00000486828 RUVBL1Q9Y265 456 aaKnown RBP17.42■□□□□ 0.38
PDLIM7-207ENST00000486828 PDE4DIPQ5VU43 2346 aa17.42■□□□□ 0.38
PDLIM7-207ENST00000486828 MTCL1Q9Y4B5 1905 aaKnown RBP17.42■□□□□ 0.38
PDLIM7-207ENST00000486828 SLC5A10A0PJK1 596 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 SOBPA7XYQ1 873 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 ZBBXA8MT70 800 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 H0YIV9 168 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 FPGTO14772 594 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 ATG13O75143 517 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 CATP04040 527 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 HNF4AP41235 474 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 MAGEA2P43356 314 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 PRLHRP49683 370 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 WNT3P56703 355 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 C21orf58P58505 322 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 PCDH1Q08174 1060 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 DHRS4L2Q6PKH6 230 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 RTL10Q7L3V2 364 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 CHST15Q7LFX5 561 aaPredicted RBP17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 TMEM179BQ7Z7N9 219 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 HCAR2Q8TDS4 363 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 HDAC2Q92769 488 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 METTL2AQ96IZ6 378 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 LRIG1Q96JA1 1093 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 CNDP2Q96KP4 475 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 PANX1Q96RD7 426 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 CLIC1O00299 241 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 SCN2BO60939 215 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 E2F6O75461 281 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 HSD3B1P14060 373 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 JUNBP17275 347 aaPredicted RBP17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 EEF1B2P24534 225 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 HSD3B2P26439 372 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 MMP12P39900 470 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 PREPP48147 710 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 KCNAB2Q13303 367 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 NAE1Q13564 534 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 BROXQ5VW32 411 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 HIPK1Q86Z02 1210 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 PGBD3Q8N328 593 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 OR8J2Q8NGG1 315 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 GAB3Q8WWW8 586 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 MTERF1Q99551 399 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 CCM2Q9BSQ5 444 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 FAM120CQ9NX05 1096 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 C3orf18Q9UK00 162 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 CDH7Q9ULB5 785 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 PCDHGA8Q9Y5G5 932 aa17.41■□□□□ 0.38
PDLIM7-207ENST00000486828 B4GAT1O43505 415 aa17.4■□□□□ 0.38
PDLIM7-207ENST00000486828 COX7A2P14406 83 aa17.4■□□□□ 0.38
PDLIM7-207ENST00000486828 ENGP17813 658 aa17.4■□□□□ 0.38
PDLIM7-207ENST00000486828 CRHBPP24387 322 aa17.4■□□□□ 0.38
PDLIM7-207ENST00000486828 POLR2IP36954 125 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-207ENST00000486828 PIGAP37287 484 aa17.4■□□□□ 0.38
PDLIM7-207ENST00000486828 MAPK9P45984 424 aa17.4■□□□□ 0.38
PDLIM7-207ENST00000486828 BDKRB1P46663 353 aa17.4■□□□□ 0.38
PDLIM7-207ENST00000486828 VASPP50552 380 aaPredicted RBP17.4■□□□□ 0.38
PDLIM7-207ENST00000486828 HPCAP84074 193 aa17.4■□□□□ 0.38
PDLIM7-207ENST00000486828 ACSM2AQ08AH3 577 aa17.4■□□□□ 0.38
PDLIM7-207ENST00000486828 NEDD8Q15843 81 aa17.4■□□□□ 0.38
PDLIM7-207ENST00000486828 GPR107Q5VW38 600 aa17.4■□□□□ 0.38
PDLIM7-207ENST00000486828 ACSM2BQ68CK6 577 aa17.4■□□□□ 0.38
PDLIM7-207ENST00000486828 ANKRD34AQ69YU3 496 aa17.4■□□□□ 0.38
PDLIM7-207ENST00000486828 LIPIQ6XZB0 460 aa17.4■□□□□ 0.38
PDLIM7-207ENST00000486828 CHPFQ8IZ52 775 aa17.4■□□□□ 0.38
PDLIM7-207ENST00000486828 LILRA3Q8N6C8 439 aaPredicted RBP17.4■□□□□ 0.38
PDLIM7-207ENST00000486828 STARD8Q92502 1023 aa17.4■□□□□ 0.38
PDLIM7-207ENST00000486828 TBC1D20Q96BZ9 403 aa17.4■□□□□ 0.38
PDLIM7-207ENST00000486828 C11orf24Q96F05 449 aaPredicted RBP17.4■□□□□ 0.38
PDLIM7-207ENST00000486828 MED8Q96G25 268 aa17.4■□□□□ 0.38
PDLIM7-207ENST00000486828 OR4K3Q96R72 315 aa17.4■□□□□ 0.38
PDLIM7-207ENST00000486828 BRF2Q9HAW0 419 aa17.4■□□□□ 0.38
PDLIM7-207ENST00000486828 AASDHPPTQ9NRN7 309 aa17.4■□□□□ 0.38
PDLIM7-207ENST00000486828 HCFC2Q9Y5Z7 792 aa17.4■□□□□ 0.38
PDLIM7-207ENST00000486828 H3BMQ9 156 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 HS6ST1O60243 411 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 MYO1DO94832 1006 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 EPN2O95208 641 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 ELFN1P0C7U0 828 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 GPX2P18283 190 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 IMPA1P29218 277 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 TPD52P55327 224 aaPredicted RBP17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 NTHL1P78549 312 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 TMEM115Q12893 351 aaPredicted RBP17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 PPP1R8Q12972 351 aaKnown RBP17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 BIRC2Q13490 618 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms