RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 GTF2H2Q13888 395 aa12.31□□□□□ -0.44
HDAC6-229ENST00000486665 KIR2DS3Q14952 304 aa12.31□□□□□ -0.44
HDAC6-229ENST00000486665 SF1Q15637 639 aaKnown RBP12.31□□□□□ -0.44
HDAC6-229ENST00000486665 CHI3L2Q15782 390 aa12.31□□□□□ -0.44
HDAC6-229ENST00000486665 THEMIS2Q5TEJ8 643 aa12.31□□□□□ -0.44
HDAC6-229ENST00000486665 PRAMEF9Q5VWM5 478 aa12.31□□□□□ -0.44
HDAC6-229ENST00000486665 PRAMEF13Q5VWM6 474 aa12.31□□□□□ -0.44
HDAC6-229ENST00000486665 KIAA1614Q5VZ46 1190 aa12.31□□□□□ -0.44
HDAC6-229ENST00000486665 ARMC6Q6NXE6 501 aa12.31□□□□□ -0.44
HDAC6-229ENST00000486665 GTF2H2CQ6P1K8 395 aa12.31□□□□□ -0.44
HDAC6-229ENST00000486665 LCTLQ6UWM7 567 aa12.31□□□□□ -0.44
HDAC6-229ENST00000486665 LRRC70Q7Z2Q7 622 aa12.31□□□□□ -0.44
HDAC6-229ENST00000486665 TMPRSS9Q7Z410 1059 aa12.31□□□□□ -0.44
HDAC6-229ENST00000486665 GOLGA7Q7Z5G4 137 aa12.31□□□□□ -0.44
HDAC6-229ENST00000486665 TRIM73Q86UV7 250 aa12.31□□□□□ -0.44
HDAC6-229ENST00000486665 ARFGAP2Q8N6H7 521 aa12.31□□□□□ -0.44
HDAC6-229ENST00000486665 FAM76AQ8TAV0 307 aa12.31□□□□□ -0.44
HDAC6-229ENST00000486665 AHCYL2Q96HN2 611 aaKnown RBP12.31□□□□□ -0.44
HDAC6-229ENST00000486665 MIPEPQ99797 713 aa12.31□□□□□ -0.44
HDAC6-229ENST00000486665 ZNF395Q9H8N7 513 aaPredicted RBP12.31□□□□□ -0.44
HDAC6-229ENST00000486665 ZBTB26Q9HCK0 441 aa12.31□□□□□ -0.44
HDAC6-229ENST00000486665 EVA1BQ9NVM1 165 aa12.31□□□□□ -0.44
HDAC6-229ENST00000486665 TMEM9Q9P0T7 183 aa12.31□□□□□ -0.44
HDAC6-229ENST00000486665 OPTCQ9UBM4 332 aa12.31□□□□□ -0.44
HDAC6-229ENST00000486665 TAC3Q9UHF0 121 aa12.31□□□□□ -0.44
HDAC6-229ENST00000486665 KLHL20Q9Y2M5 609 aa12.31□□□□□ -0.44
HDAC6-229ENST00000486665 ANKRD12Q6UB98 2062 aa12.31□□□□□ -0.44
HDAC6-229ENST00000486665 A0A087WV48 116 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 IGKV1-8A0A0C4DH67 115 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 A0A1B0GTL3 188 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 OR7A17O14581 309 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 TLX3O43711 291 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-229ENST00000486665 ITM2AO43736 263 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 KIF1CO43896 1103 aaKnown RBP12.3□□□□□ -0.44
HDAC6-229ENST00000486665 PRB1P04280 392 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 NEFHP12036 1026 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 CCND1P24385 295 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 ITPKBP27987 946 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 GYS2P54840 703 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 GPLD1P80108 840 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 CLCQ05315 142 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 PRDX1Q06830 199 aaKnown RBP12.3□□□□□ -0.44
HDAC6-229ENST00000486665 CDC16Q13042 620 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 PRKAA1Q13131 559 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 FAM219BQ5XKK7 198 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 ICE2Q659A1 982 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 IRGCQ6NXR0 463 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 METTL2BQ6P1Q9 378 aaKnown RBP12.3□□□□□ -0.44
HDAC6-229ENST00000486665 KLHL35Q6PF15 583 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 SPESP1Q6UW49 350 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 ZNF574Q6ZN55 896 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-229ENST00000486665 FAM92BQ6ZTR7 304 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 LSMEM2Q8N112 164 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 GALNT15Q8N3T1 639 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 OR2L3Q8NG85 312 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 TRPC4APQ8TEL6 797 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 PPP4R1Q8TF05 950 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 NEIL2Q969S2 332 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 DCBLD2Q96PD2 775 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 TGM7Q96PF1 710 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 NUDT22Q9BRQ3 303 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 RAB33BQ9H082 229 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 PCBD2Q9H0N5 130 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 EPB41L1Q9H4G0 881 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 NOL11Q9H8H0 719 aaKnown RBP12.3□□□□□ -0.44
HDAC6-229ENST00000486665 SLC6A20Q9NP91 592 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 SEMA4BQ9NPR2 832 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-229ENST00000486665 CUEDC1Q9NWM3 386 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-229ENST00000486665 EPHA6Q9UF33 1036 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 POMT2Q9UKY4 750 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 ENTPD2Q9Y5L3 495 aa12.3□□□□□ -0.44
HDAC6-229ENST00000486665 PTPRQQ9UMZ3 2332 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 E7EQ34 232 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 NTN3O00634 580 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-229ENST00000486665 UBFD1O14562 309 aaKnown RBP12.29□□□□□ -0.44
HDAC6-229ENST00000486665 DUX1O43812 170 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 NPHS1O60500 1241 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 PRAMEF10O60809 474 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 SERPINE1P05121 402 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 GP1BAP07359 652 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 CDH1P12830 882 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 PVRP15151 417 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 EPB42P16452 691 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 VARSP26640 1264 aaKnown RBP12.29□□□□□ -0.44
HDAC6-229ENST00000486665 ASPHQ12797 758 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 STX3Q13277 289 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 PDK4Q16654 411 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 SLC5A12Q1EHB4 618 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 CFAP157Q5JU67 520 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 CATSPEREQ5SY80 951 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 WDR74Q6RFH5 385 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-229ENST00000486665 SLCO4C1Q6ZQN7 724 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 FRMD7Q6ZUT3 714 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 C17orf64Q86WR6 236 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 OR52B6Q8NGF0 335 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 PPP1R14CQ8TAE6 165 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 DYDC1Q8WWB3 177 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 CKAP2Q8WWK9 683 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 SLC5A11Q8WWX8 675 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 ZNF75CPQ92670 426 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms