RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 ZNF776Q68DI1 518 aaPredicted RBP4.22□□□□□ -1.73
SPTA1-206ENST00000484520 METTL2BQ6P1Q9 378 aaKnown RBP4.22□□□□□ -1.73
SPTA1-206ENST00000484520 NEK5Q6P3R8 708 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 TTC23LQ6PF05 361 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 PARM1Q6UWI2 310 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 RAPH1Q70E73 1250 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 DPPA4Q7L190 304 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 KBTBD6Q86V97 674 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 C11orf74Q86VG3 221 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 CAMK1DQ8IU85 385 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 SLC22A9Q8IVM8 553 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 TTC30BQ8N4P2 665 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 AFAP1L2Q8N4X5 818 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 DCLK2Q8N568 766 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 NKAPQ8N5F7 415 aaKnown RBP4.22□□□□□ -1.73
SPTA1-206ENST00000484520 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.22□□□□□ -1.73
SPTA1-206ENST00000484520 TRAM1L1Q8N609 369 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 GBP7Q8N8V2 638 aaPredicted RBP4.22□□□□□ -1.73
SPTA1-206ENST00000484520 GPR156Q8NFN8 814 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 OR4K2Q8NGD2 314 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 ZNF398Q8TD17 642 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 HDAC10Q969S8 669 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 ZBTB9Q96C00 473 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 RSPRY1Q96DX4 576 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 DCUN1D1Q96GG9 259 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 MARS2Q96GW9 593 aaKnown RBP4.22□□□□□ -1.73
SPTA1-206ENST00000484520 CDKN2AIPNLQ96HQ2 116 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 ZNF514Q96K75 400 aaPredicted RBP4.22□□□□□ -1.73
SPTA1-206ENST00000484520 DNAJC1Q96KC8 554 aaKnown RBP4.22□□□□□ -1.73
SPTA1-206ENST00000484520 LRRC3BQ96PB8 259 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 VPS35Q96QK1 796 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 PANX3Q96QZ0 392 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 GABRG3Q99928 467 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 MRPL57Q9BQC6 102 aaKnown RBP4.22□□□□□ -1.73
SPTA1-206ENST00000484520 KXD1Q9BQD3 176 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 TRMOQ9BU70 441 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 CLPBQ9H078 707 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 MRPL46Q9H2W6 279 aaKnown RBP4.22□□□□□ -1.73
SPTA1-206ENST00000484520 EPHX3Q9H6B9 360 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 UBE2ZQ9H832 354 aaPredicted RBP4.22□□□□□ -1.73
SPTA1-206ENST00000484520 NMRAL1Q9HBL8 299 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 EMC7Q9NPA0 242 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 SNX15Q9NRS6 342 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 FBXO34Q9NWN3 711 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 PIH1D1Q9NWS0 290 aaKnown RBP4.22□□□□□ -1.73
SPTA1-206ENST00000484520 CTNNAL1Q9UBT7 734 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 FZD4Q9ULV1 537 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 STK38LQ9Y2H1 464 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 ACOT9Q9Y305 439 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 PLLPQ9Y342 182 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 ARL5AQ9Y689 179 aa4.22□□□□□ -1.73
SPTA1-206ENST00000484520 TRGV11A0A075B6L2 103 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 TRBV5-4A0A0C4DH59 114 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 CCDC162PA2VCL2 907 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 PABPN1LA6NDY0 278 aaKnown RBP4.21□□□□□ -1.74
SPTA1-206ENST00000484520 NPIPB15A6NHN6 443 aaPredicted RBP4.21□□□□□ -1.74
SPTA1-206ENST00000484520 C16orf96A6NNT2 1141 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 AGAP14A8MT82 685 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 TMEM114B3SHH9 223 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 E5RI56 91 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 SPECC1L-ADORA2AF8WAN1 911 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 SLCO1B7G3V0H7 640 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 KPNA3O00505 521 aaPredicted RBP4.21□□□□□ -1.74
SPTA1-206ENST00000484520 NDUFAB1O14561 156 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 TOR1BO14657 336 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 YY2O15391 372 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 MBTPS2O43462 519 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 SRP72O76094 671 aaKnown RBP4.21□□□□□ -1.74
SPTA1-206ENST00000484520 KLHL2O95198 593 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 PIGNO95427 931 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 TGDSO95455 350 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 GOT2P00505 430 aaKnown RBP4.21□□□□□ -1.74
SPTA1-206ENST00000484520 AHSGP02765 367 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 FTH1P02794 183 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 PDHA1P08559 390 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 OR56A5P0C7T3 313 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 ELFN1P0C7U0 828 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 DHRS4L1P0CG22 281 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 TROVE2P10155 538 aaKnown RBP eCLIP4.21□□□□□ -1.74
SPTA1-206ENST00000484520 NEFHP12036 1026 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 HOXB6P17509 224 aaKnown RBP4.21□□□□□ -1.74
SPTA1-206ENST00000484520 KCNA5P22460 613 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 ITPKBP27987 946 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 NTSR1P30989 418 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 FOXN2P32314 431 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 RPA3P35244 121 aaPredicted RBP4.21□□□□□ -1.74
SPTA1-206ENST00000484520 HNF1BP35680 557 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 MMP12P39900 470 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 OPRD1P41143 372 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 SPINT3P49223 89 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 RGS4P49798 205 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 STK19P49842 368 aaPredicted RBP4.21□□□□□ -1.74
SPTA1-206ENST00000484520 CSRP3P50461 194 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 IRX1P78414 480 aaPredicted RBP4.21□□□□□ -1.74
SPTA1-206ENST00000484520 CBX1P83916 185 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 TFF2Q03403 129 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 KDSRQ06136 332 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 TDGQ13569 410 aa4.21□□□□□ -1.74
SPTA1-206ENST00000484520 PDE1CQ14123 709 aaPredicted RBP4.21□□□□□ -1.74
SPTA1-206ENST00000484520 ZNF234Q14588 700 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms