RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 ACVR1Q04771 509 aa12.22□□□□□ -0.45
UBR4-213ENST00000483922 DSG2Q14126 1118 aa12.22□□□□□ -0.45
UBR4-213ENST00000483922 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.22□□□□□ -0.45
UBR4-213ENST00000483922 CCDC181Q5TID7 509 aa12.22□□□□□ -0.45
UBR4-213ENST00000483922 C11orf63Q6NUN7 778 aa12.22□□□□□ -0.45
UBR4-213ENST00000483922 CNSTQ6PJW8 725 aa12.22□□□□□ -0.45
UBR4-213ENST00000483922 RIPOR1Q6ZS17 1223 aa12.22□□□□□ -0.45
UBR4-213ENST00000483922 NEK10Q6ZWH5 1172 aa12.22□□□□□ -0.45
UBR4-213ENST00000483922 FGD2Q7Z6J4 655 aa12.22□□□□□ -0.45
UBR4-213ENST00000483922 CDH24Q86UP0 819 aa12.22□□□□□ -0.45
UBR4-213ENST00000483922 SPPL2CQ8IUH8 684 aa12.22□□□□□ -0.45
UBR4-213ENST00000483922 ZC3H7AQ8IWR0 971 aaKnown RBP12.22□□□□□ -0.45
UBR4-213ENST00000483922 HMGCLL1Q8TB92 370 aa12.22□□□□□ -0.45
UBR4-213ENST00000483922 VPS50Q96JG6 964 aa12.22□□□□□ -0.45
UBR4-213ENST00000483922 SPOCK3Q9BQ16 436 aa12.22□□□□□ -0.45
UBR4-213ENST00000483922 TGIF2Q9GZN2 237 aa12.22□□□□□ -0.45
UBR4-213ENST00000483922 TSPAN10Q9H1Z9 355 aaPredicted RBP12.22□□□□□ -0.45
UBR4-213ENST00000483922 LRRC40Q9H9A6 602 aa12.22□□□□□ -0.45
UBR4-213ENST00000483922 SLC39A10Q9ULF5 831 aa12.22□□□□□ -0.45
UBR4-213ENST00000483922 NEU2Q9Y3R4 380 aa12.22□□□□□ -0.45
UBR4-213ENST00000483922 DUSP10Q9Y6W6 482 aa12.22□□□□□ -0.45
UBR4-213ENST00000483922 MACROD2A1Z1Q3 448 aa12.21□□□□□ -0.45
UBR4-213ENST00000483922 GOLGA6L19H0YKK7 550 aa12.21□□□□□ -0.45
UBR4-213ENST00000483922 KDM1AO60341 852 aa12.21□□□□□ -0.45
UBR4-213ENST00000483922 HEXBP07686 556 aa12.21□□□□□ -0.45
UBR4-213ENST00000483922 TLE4Q04727 773 aa12.21□□□□□ -0.45
UBR4-213ENST00000483922 ZNF33BQ06732 778 aa12.21□□□□□ -0.45
UBR4-213ENST00000483922 TBX2Q13207 712 aaPredicted RBP12.21□□□□□ -0.45
UBR4-213ENST00000483922 MUM1Q2TAK8 710 aa12.21□□□□□ -0.45
UBR4-213ENST00000483922 ZNF766Q5HY98 468 aa12.21□□□□□ -0.45
UBR4-213ENST00000483922 TSTD2Q5T7W7 516 aa12.21□□□□□ -0.45
UBR4-213ENST00000483922 H3F3CQ6NXT2 135 aa12.21□□□□□ -0.45
UBR4-213ENST00000483922 MTFR2Q6P444 385 aa12.21□□□□□ -0.45
UBR4-213ENST00000483922 LRRC8BQ6P9F7 803 aa12.21□□□□□ -0.45
UBR4-213ENST00000483922 LANCL3Q6ZV70 420 aa12.21□□□□□ -0.45
UBR4-213ENST00000483922 SIAH3Q8IW03 269 aa12.21□□□□□ -0.45
UBR4-213ENST00000483922 RAD51AP1Q96B01 352 aa12.21□□□□□ -0.45
UBR4-213ENST00000483922 GPR137Q96N19 417 aa12.21□□□□□ -0.45
UBR4-213ENST00000483922 OR2A5Q96R48 311 aa12.21□□□□□ -0.45
UBR4-213ENST00000483922 DPH7Q9BTV6 452 aa12.21□□□□□ -0.45
UBR4-213ENST00000483922 YIPF2Q9BWQ6 316 aa12.21□□□□□ -0.45
UBR4-213ENST00000483922 P2RY12Q9H244 342 aa12.21□□□□□ -0.45
UBR4-213ENST00000483922 TTC7AQ9ULT0 858 aaPredicted RBP12.21□□□□□ -0.45
UBR4-213ENST00000483922 HRH3Q9Y5N1 445 aa12.21□□□□□ -0.45
UBR4-213ENST00000483922 A0A0A6YYC8 382 aaPredicted RBP12.2□□□□□ -0.46
UBR4-213ENST00000483922 TCRBV7S2A1N4TA0A589 114 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 A8MUI8 341 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 I3L1I5 382 aaPredicted RBP12.2□□□□□ -0.46
UBR4-213ENST00000483922 P2RX6O15547 441 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 FKBP9O95302 570 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 HOXB4P17483 251 aaPredicted RBP12.2□□□□□ -0.46
UBR4-213ENST00000483922 CAPN3P20807 821 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 CXCR2P25025 360 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 CD96P40200 585 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 EMP3P54852 163 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 CSNK1G2P78368 415 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 HSF1Q00613 529 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 TUBA3CQ13748 450 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 RNFT1Q5M7Z0 435 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 ABHD17BQ5VST6 288 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 SPINK14Q6IE38 97 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 TUBA3EQ6PEY2 450 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 PAQR7Q86WK9 346 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 DOLPP1Q86YN1 238 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 BEST3Q8N1M1 668 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 MDS2Q8NDY4 140 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 OR4L1Q8NH43 312 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 THAP3Q8WTV1 239 aaPredicted RBP12.2□□□□□ -0.46
UBR4-213ENST00000483922 MMABQ96EY8 250 aaPredicted RBP12.2□□□□□ -0.46
UBR4-213ENST00000483922 CABS1Q96KC9 395 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 DMRTA2Q96SC8 542 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 ZFYVE21Q9BQ24 234 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 ACAT2Q9BWD1 397 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 MCCC2Q9HCC0 563 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 RIC8BQ9NVN3 520 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 ANKRD10Q9NXR5 420 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 GALPQ9UBC7 116 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 MKL2Q9ULH7 1088 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.2□□□□□ -0.46
UBR4-213ENST00000483922 PCDHA13Q9Y5I0 950 aa12.2□□□□□ -0.46
UBR4-213ENST00000483922 ASPDHA6ND91 283 aa12.19□□□□□ -0.46
UBR4-213ENST00000483922 NPIPA5E9PKD4 350 aa12.19□□□□□ -0.46
UBR4-213ENST00000483922 STK10O94804 968 aaKnown RBP12.19□□□□□ -0.46
UBR4-213ENST00000483922 SEC24DO94855 1032 aaPredicted RBP12.19□□□□□ -0.46
UBR4-213ENST00000483922 RPN2P04844 631 aa12.19□□□□□ -0.46
UBR4-213ENST00000483922 ERGP11308 486 aa12.19□□□□□ -0.46
UBR4-213ENST00000483922 ESRRAP11474 423 aaPredicted RBP12.19□□□□□ -0.46
UBR4-213ENST00000483922 CTNNA2P26232 953 aa12.19□□□□□ -0.46
UBR4-213ENST00000483922 SMSP52788 366 aa12.19□□□□□ -0.46
UBR4-213ENST00000483922 TRIM14Q14142 442 aa12.19□□□□□ -0.46
UBR4-213ENST00000483922 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.19□□□□□ -0.46
UBR4-213ENST00000483922 SUSD1Q6UWL2 747 aa12.19□□□□□ -0.46
UBR4-213ENST00000483922 C3P1Q6ZMU1 363 aa12.19□□□□□ -0.46
UBR4-213ENST00000483922 PRSS41Q7RTY9 318 aa12.19□□□□□ -0.46
UBR4-213ENST00000483922 PRUNE1Q86TP1 453 aa12.19□□□□□ -0.46
UBR4-213ENST00000483922 CEP97Q8IW35 865 aa12.19□□□□□ -0.46
UBR4-213ENST00000483922 SLC35B2Q8TB61 432 aa12.19□□□□□ -0.46
UBR4-213ENST00000483922 SCMH1Q96GD3 660 aa12.19□□□□□ -0.46
UBR4-213ENST00000483922 PPP1R2P1Q96PQ5 205 aa12.19□□□□□ -0.46
UBR4-213ENST00000483922 CYTH2Q99418 400 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms