RNA–Protein interactions for RNA: ENST00000483768.1

ZNF561-216, Transcript of zinc finger protein 561, humanhuman

TSL 1 (best)

Gene ZNF561, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-216ENST00000483768 TRIM73Q86UV7 250 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 CCDC25Q86WR0 208 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 SIAH3Q8IW03 269 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 C4orf19Q8IY42 314 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 TMEM132CQ8N3T6 1108 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 GALNT16Q8N428 558 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 PDCL2Q8N4E4 241 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 CERS5Q8N5B7 392 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 EIF1ADQ8N9N8 165 aaKnown RBP3.15□□□□□ -1.91
ZNF561-216ENST00000483768 OR13C2Q8NGS9 318 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 B4GALNT2Q8NHY0 566 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 ZNF671Q8TAW3 534 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 VOPP1Q96AW1 172 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 FBXL8Q96CD0 374 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 SNRNP40Q96DI7 357 aaKnown RBP3.15□□□□□ -1.91
ZNF561-216ENST00000483768 SGF29Q96ES7 293 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 EPSTI1Q96J88 318 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 PRMT6Q96LA8 375 aaPredicted RBP3.15□□□□□ -1.91
ZNF561-216ENST00000483768 LRRC3BQ96PB8 259 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 RBM14Q96PK6 669 aaKnown RBP3.15□□□□□ -1.91
ZNF561-216ENST00000483768 ACOX2Q99424 681 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 CPNE1Q99829 537 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 TBCDQ9BTW9 1192 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 ZNF416Q9BWM5 594 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 GON7Q9BXV9 100 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 RNF26Q9BY78 433 aaPredicted RBP3.15□□□□□ -1.91
ZNF561-216ENST00000483768 EGLN1Q9GZT9 426 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 TMEM39BQ9GZU3 492 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 NAPBQ9H115 298 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 RMND5AQ9H871 391 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 ECT2Q9H8V3 914 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 CPNE5Q9HCH3 593 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 TXNRD2Q9NNW7 524 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 PPANQ9NQ55 473 aaKnown RBP3.15□□□□□ -1.91
ZNF561-216ENST00000483768 TRPV5Q9NQA5 729 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 DDX4Q9NQI0 724 aaKnown RBP3.15□□□□□ -1.91
ZNF561-216ENST00000483768 ARPP21Q9UBL0 812 aaPredicted RBP3.15□□□□□ -1.91
ZNF561-216ENST00000483768 TRIM10Q9UDY6 481 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 CHRNA9Q9UGM1 479 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 FBXO40Q9UH90 709 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 UBQLN2Q9UHD9 624 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 TMEM184BQ9Y519 407 aaPredicted RBP3.15□□□□□ -1.91
ZNF561-216ENST00000483768 TNFRSF18Q9Y5U5 241 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 A3GALT2U3KPV4 340 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 SPACA6W5XKT8 324 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 ZFHX4Q86UP3 3567 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 PCSK5Q92824 1860 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 BDP1A6H8Y1 2624 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 SH3TC1Q8TE82 1336 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 ANKRD36CQ5JPF3 1778 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 CACNA1GO43497 2377 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 PIEZO1Q92508 2521 aa3.15□□□□□ -1.91
ZNF561-216ENST00000483768 PSME4Q14997 1843 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 CENPVL1A0A0U1RR11 272 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 MACROD2A1Z1Q3 448 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 TRIM49BA6NDI0 452 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 FAM47DPA6NHR8 397 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 AHRRA9YTQ3 701 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 VWC2LB2RUY7 222 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 TCP10L2B9ZVM9 353 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 CLIC1O00299 241 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 EBAG9O00559 213 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 CTAGE5O15320 804 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 CLDN3O15551 220 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 MSI1O43347 362 aaKnown RBP3.14□□□□□ -1.91
ZNF561-216ENST00000483768 ATP9AO75110 1047 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 MOSPD3O75425 235 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 ZNF821O75541 412 aaPredicted RBP3.14□□□□□ -1.91
ZNF561-216ENST00000483768 NDUFA10O95299 355 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 VNN2O95498 520 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 KRT6BP04259 564 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 PGK2P07205 417 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 SPP1P10451 314 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 CYP2D6P10635 497 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 CD22P20273 847 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 ZFP36P26651 326 aaKnown RBP3.14□□□□□ -1.91
ZNF561-216ENST00000483768 YWHAQP27348 245 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 PTPN4P29074 926 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 PRDX6P30041 224 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 SLC6A6P31641 620 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 ANP32AP39687 249 aaKnown RBP3.14□□□□□ -1.91
ZNF561-216ENST00000483768 SSR1P43307 286 aaKnown RBP3.14□□□□□ -1.91
ZNF561-216ENST00000483768 KRT6CP48668 564 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 CENPAP49450 140 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 HTR6P50406 440 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 VAV2P52735 878 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 TNFRSF17Q02223 184 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 TFF2Q03403 129 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 ARHGEF6Q15052 776 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 SHHQ15465 462 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 SOWAHAQ2M3V2 549 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 ERCC6LQ2NKX8 1250 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 ESCO2Q56NI9 601 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 PRAMEF19Q5SWL8 479 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.14□□□□□ -1.91
ZNF561-216ENST00000483768 ZNF618Q5T7W0 954 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 ALS2CLQ60I27 953 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 ARHGAP17Q68EM7 881 aa3.14□□□□□ -1.91
ZNF561-216ENST00000483768 FAM109BQ6ICB4 259 aaPredicted RBP3.14□□□□□ -1.91
ZNF561-216ENST00000483768 PMF1Q6P1K2 205 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms