RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 ACSL1P33121 698 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 PCDH1Q08174 1060 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 SGCGQ13326 291 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 E2F2Q14209 437 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 GTDC1Q4AE62 458 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 GRHL2Q6ISB3 625 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 PDZD3Q86UT5 571 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 RALGPS2Q86X27 583 aaPredicted RBP8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 MSRB3Q8IXL7 192 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 PQLC1Q8N2U9 271 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 OXR1Q8N573 874 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 RPLP0P6Q8NHW5 317 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 HUS1BQ8NHY5 278 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 GTF2H4Q92759 462 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 PKP2Q99959 881 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 MENTQ9BUN1 341 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 ACAT2Q9BWD1 397 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 DPY30Q9C005 99 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 ALG2Q9H553 416 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 COPS7BQ9H9Q2 264 aaPredicted RBP8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 SGK2Q9HBY8 427 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 SPATA6Q9NWH7 488 aaPredicted RBP8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 ASIC5Q9NY37 505 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 SLC25A37Q9NYZ2 338 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 MUTYHQ9UIF7 546 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 TDRKHQ9Y2W6 561 aaKnown RBP8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 KCNE2Q9Y6J6 123 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 CROCCQ5TZA2 2017 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 NUP214P35658 2090 aaPredicted RBP8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 PRAMEF33A0A0G2JMD5 474 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 PRSS51A0A1B0GVH4 220 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 EIF4E1BA6NMX2 242 aaKnown RBP8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 DFNA5O60443 496 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 C8BP07358 591 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 MTHFD1P11586 935 aaKnown RBP8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 HSD17B1P14061 328 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 GRIA3P42263 894 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 GSK3BP49841 420 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 CLCNKAP51800 687 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 PNLIPRP1P54315 467 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 CLDN2P57739 230 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 RHDQ02161 417 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 MAD2L1Q13257 205 aaPredicted RBP8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 TCEA2Q15560 299 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 SMU1Q2TAY7 513 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 SFT2D3Q587I9 215 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 CACHD1Q5VU97 1274 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 SDE2Q6IQ49 451 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 CAPN13Q6MZZ7 669 aaPredicted RBP8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 NOXRED1Q6NXP6 359 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 IZUMO2Q6UXV1 221 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 TRIM73Q86UV7 250 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 ANKRD46Q86W74 232 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 SPPL2CQ8IUH8 684 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 HID1Q8IV36 788 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 GJD3Q8N144 294 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 SLC13A3Q8WWT9 602 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 SIPA1Q96FS4 1042 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 CMTM7Q96FZ5 175 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 TMEM45AQ9NWC5 275 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 CHCHD3Q9NX63 227 aaKnown RBP8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 VPS29Q9UBQ0 182 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 RIMS3Q9UJD0 308 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 KCNK6Q9Y257 313 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 GOLGA4Q13439 2230 aaKnown RBP8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 TCRBV3S1A0A5B6 114 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 NPIPB8E9PQR5 432 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 MYCLP1P12525 358 aaPredicted RBP8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 NCK1P16333 377 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 NDUFV2P19404 249 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 MAGEA8P43361 318 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 MAPK9P45984 424 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 CLDN8P56748 225 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 PLOD1Q02809 727 aaPredicted RBP8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 LIPEQ05469 1076 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 ZP2Q05996 745 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 GRSF1Q12849 480 aaKnown RBP eCLIP8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 TRAP1Q12931 704 aaKnown RBP8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 CCINQ13939 588 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 TRIP10Q15642 601 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 MLF2Q15773 248 aaPredicted RBP8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 PUS10Q3MIT2 529 aaKnown RBP8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 TPRG1LQ5T0D9 272 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 HORMAD1Q86X24 394 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 DHFR2Q86XF0 187 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 RIMKLAQ8IXN7 391 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 C10orf111Q8N326 155 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 OR5K2Q8NHB8 316 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 CANT1Q8WVQ1 401 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 CGREF1Q99674 301 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 ZNF184Q99676 751 aaPredicted RBP8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 C8orf33Q9H7E9 229 aaPredicted RBP8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 TRPV5Q9NQA5 729 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 SERHLQ9NQF3 203 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 C2orf42Q9NWW7 574 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 PNMA8BQ9ULN7 279 aaPredicted RBP8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 SLC17A4Q9Y2C5 497 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 BTBD3Q9Y2F9 522 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 PCM1Q15154 2024 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 ZDBF2Q9HCK1 2354 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms