RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 ATP1B2P14415 290 aaPredicted RBP23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 ENGP17813 658 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 CD70P32970 193 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 KDELR2P33947 212 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 SPINT3P49223 89 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 NIPAL1Q6NVV3 410 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 CBLL1Q75N03 491 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 B3GNT8Q7Z7M8 397 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 TSPYL5Q86VY4 417 aaPredicted RBP23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 ITFG2Q969R8 447 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 SH3YL1Q96HL8 342 aaPredicted RBP23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 CEP44Q9C0F1 390 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 REXO4Q9GZR2 422 aaKnown RBP23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 CCDC90BQ9GZT6 254 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 NDRG4Q9ULP0 352 aaKnown RBP23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 ABCG2Q9UNQ0 655 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 TDRKHQ9Y2W6 561 aaKnown RBP23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 CORINQ9Y5Q5 1042 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 TET1Q8NFU7 2136 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 SCN2BO60939 215 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 AP2A2O94973 939 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 FKBP9O95302 570 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 INHAP05111 366 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 HSD3B1P14060 373 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 LHCGRP22888 699 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 HSD3B2P26439 372 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 MLLT10P55197 1068 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 PIGFQ07326 219 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 SYT6Q5T7P8 510 aaPredicted RBP23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 C22orf39Q6P5X5 142 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 SYT12Q8IV01 421 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 CNIH3Q8TBE1 160 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 LMLNQ96KR4 655 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 RIBC2Q9H4K1 309 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 RUVBL1Q9Y265 456 aaKnown RBP23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 SLC22A14Q9Y267 594 aa23.88■■□□□ 1.41
SYNGAP1-206ENST00000479510 MAGEB17A8MXT2 336 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 MITFO75030 526 aaPredicted RBP23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 PPIBP23284 216 aaKnown RBP23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 CLK3P49761 638 aaKnown RBP23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 CSNK2BP67870 215 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 CHIT1Q13231 466 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 SLC14A1Q13336 389 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 GTF2H3Q13889 308 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 UGT8Q16880 541 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 CEP68Q76N32 757 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 HORMAD1Q86X24 394 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 SKA2Q8WVK7 121 aaPredicted RBP23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 MRPS31Q92665 395 aaKnown RBP23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 EGLN2Q96KS0 407 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 P2RY13Q9BPV8 354 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 CFAP97Q9P2B7 532 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 CORO2BQ9UQ03 480 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 GMPPBQ9Y5P6 360 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 J3QRK9 145 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 LRATO95237 230 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 POP4O95707 220 aaKnown RBP23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 C1SP09871 688 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 HALP42357 657 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 ITGA1P56199 1179 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 WNT3P56703 355 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 PCDH1Q08174 1060 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 NPTX1Q15818 432 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 BBS7Q8IWZ6 715 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 SLC39A11Q8N1S5 342 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 OR7A2PQ8NGA2 310 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 IPCEF1Q8WWN9 437 aaPredicted RBP23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 YIPF6Q96EC8 236 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 TMEM169Q96HH4 297 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 VPS29Q9UBQ0 182 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 CLEC4EQ9ULY5 219 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 PCDHGA10Q9Y5H3 936 aa23.87■■□□□ 1.41
SYNGAP1-206ENST00000479510 FUOMA2VDF0 154 aa23.86■■□□□ 1.41
SYNGAP1-206ENST00000479510 XPNPEP2O43895 674 aa23.86■■□□□ 1.41
SYNGAP1-206ENST00000479510 PRAMEF4O60810 478 aa23.86■■□□□ 1.41
SYNGAP1-206ENST00000479510 PORP16435 677 aaPredicted RBP23.86■■□□□ 1.41
SYNGAP1-206ENST00000479510 RXRGP48443 463 aa23.86■■□□□ 1.41
SYNGAP1-206ENST00000479510 PRAMEF9Q5VWM5 478 aa23.86■■□□□ 1.41
SYNGAP1-206ENST00000479510 GALNT5Q7Z7M9 940 aa23.86■■□□□ 1.41
SYNGAP1-206ENST00000479510 IGFN1Q86VF2 1251 aa23.86■■□□□ 1.41
SYNGAP1-206ENST00000479510 KLHDC8AQ8IYD2 350 aa23.86■■□□□ 1.41
SYNGAP1-206ENST00000479510 PITX2Q99697 317 aa23.86■■□□□ 1.41
SYNGAP1-206ENST00000479510 SPATA6Q9NWH7 488 aaPredicted RBP23.86■■□□□ 1.41
SYNGAP1-206ENST00000479510 KPNA4O00629 521 aaPredicted RBP23.85■■□□□ 1.41
SYNGAP1-206ENST00000479510 URODP06132 367 aa23.85■■□□□ 1.41
SYNGAP1-206ENST00000479510 OPRL1P41146 370 aa23.85■■□□□ 1.41
SYNGAP1-206ENST00000479510 SERPINB10P48595 397 aa23.85■■□□□ 1.41
SYNGAP1-206ENST00000479510 BCAP31P51572 246 aa23.85■■□□□ 1.41
SYNGAP1-206ENST00000479510 PFN3P60673 137 aa23.85■■□□□ 1.41
SYNGAP1-206ENST00000479510 POLR2LP62875 67 aaKnown RBP23.85■■□□□ 1.41
SYNGAP1-206ENST00000479510 KIAA1614Q5VZ46 1190 aa23.85■■□□□ 1.41
SYNGAP1-206ENST00000479510 FAHD1Q6P587 224 aa23.85■■□□□ 1.41
SYNGAP1-206ENST00000479510 PTOV1Q86YD1 416 aa23.85■■□□□ 1.41
SYNGAP1-206ENST00000479510 TTC29Q8NA56 475 aaPredicted RBP23.85■■□□□ 1.41
SYNGAP1-206ENST00000479510 ZNF558Q96NG5 402 aa23.85■■□□□ 1.41
SYNGAP1-206ENST00000479510 ERVK-18Q9QC07 812 aa23.85■■□□□ 1.41
SYNGAP1-206ENST00000479510 FBXO10Q9UK96 956 aa23.85■■□□□ 1.41
SYNGAP1-206ENST00000479510 TMPRSS11EQ9UL52 423 aa23.85■■□□□ 1.41
SYNGAP1-206ENST00000479510 PCDHB11Q9Y5F2 797 aa23.85■■□□□ 1.41
SYNGAP1-206ENST00000479510 E9PQ18 207 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms