RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 MRPS27Q92552 414 aaKnown RBP3.51□□□□□ -1.85
SMARCA1-204ENST00000478420 N4BP2L2Q92802 583 aaPredicted RBP3.51□□□□□ -1.85
SMARCA1-204ENST00000478420 FAM20AQ96MK3 541 aa3.51□□□□□ -1.85
SMARCA1-204ENST00000478420 ZNF558Q96NG5 402 aa3.51□□□□□ -1.85
SMARCA1-204ENST00000478420 LRRC3BQ96PB8 259 aa3.51□□□□□ -1.85
SMARCA1-204ENST00000478420 IWS1Q96ST2 819 aa3.51□□□□□ -1.85
SMARCA1-204ENST00000478420 PRRG4Q9BZD6 226 aa3.51□□□□□ -1.85
SMARCA1-204ENST00000478420 OR2B2Q9GZK3 357 aa3.51□□□□□ -1.85
SMARCA1-204ENST00000478420 CPVLQ9H3G5 476 aa3.51□□□□□ -1.85
SMARCA1-204ENST00000478420 CDH20Q9HBT6 801 aa3.51□□□□□ -1.85
SMARCA1-204ENST00000478420 FAM207AQ9NSI2 230 aaPredicted RBP3.51□□□□□ -1.85
SMARCA1-204ENST00000478420 P4HTMQ9NXG6 502 aa3.51□□□□□ -1.85
SMARCA1-204ENST00000478420 GRID1Q9ULK0 1009 aa3.51□□□□□ -1.85
SMARCA1-204ENST00000478420 MTF2Q9Y483 593 aaPredicted RBP3.51□□□□□ -1.85
SMARCA1-204ENST00000478420 CCL27Q9Y4X3 112 aa3.51□□□□□ -1.85
SMARCA1-204ENST00000478420 SYNRGQ9UMZ2 1314 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 A0A087WW49 117 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 TPM2P07951 284 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 P4HA1P13674 534 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 CYP11B2P19099 503 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 CSTF2P33240 577 aaKnown RBP eCLIP3.5□□□□□ -1.859e-8■■■■□ 24.6
SMARCA1-204ENST00000478420 EVCP57679 992 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 CAMK2DQ13557 499 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 PHKG1Q16816 387 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 PDLIM3Q53GG5 364 aaPredicted RBP3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 TCTE1Q5JU00 501 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 KRBOX4Q5JUW0 171 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 SLC35D3Q5M8T2 416 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 RAB12Q6IQ22 244 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 ABRAXAS1Q6UWZ7 409 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 CCDC186Q7Z3E2 898 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 TLK2Q86UE8 772 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 MMD2Q8IY49 270 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 LGI2Q8N0V4 545 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 RYBPQ8N488 228 aaPredicted RBP3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 SPC24Q8NBT2 197 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 CAMKVQ8NCB2 501 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 OR4K1Q8NGD4 311 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 OR13C3Q8NGS6 347 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 OR2T11Q8NH01 316 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 MRGPRDQ8TDS7 321 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 DYRK2Q92630 601 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 SPSB1Q96BD6 273 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 OTUB1Q96FW1 271 aaPredicted RBP3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 CABS1Q96KC9 395 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 ASCL2Q99929 193 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 NAA11Q9BSU3 229 aaPredicted RBP3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 SLC25A23Q9BV35 468 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 WDR13Q9H1Z4 485 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 PPANQ9NQ55 473 aaKnown RBP3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 DCAF16Q9NXF7 216 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 DNAJB9Q9UBS3 223 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 AGTPBP1Q9UPW5 1226 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 MRPS28Q9Y2Q9 187 aaKnown RBP3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 DISP3Q9P2K9 1392 aa3.5□□□□□ -1.85
SMARCA1-204ENST00000478420 NR5A2O00482 541 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 ARPC2O15144 300 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 GUCA1CO95843 209 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 RAF1P04049 648 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 GPIP06744 558 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 RNF224P0DH78 156 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 AZGP1P25311 298 aaKnown RBP3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 HSPA4P34932 840 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 KRT2P35908 639 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 YBEYP58557 167 aaPredicted RBP3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 SNRPD1P62314 119 aaKnown RBP3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 SP3Q02447 781 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 TUBB2AQ13885 445 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 NFE2L1Q14494 772 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 SQLEQ14534 574 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 SLMAPQ14BN4 828 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 HERC3Q15034 1050 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 XKR3Q5GH77 459 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 PSRC1Q6PGN9 363 aaPredicted RBP3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 NOTCH2NLQ7Z3S9 236 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 KIRREL3Q8IZU9 778 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 LSMEM2Q8N112 164 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 TMCO5AQ8N6Q1 288 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 BMPERQ8N8U9 685 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 CTCFLQ8NI51 663 aaPredicted RBP3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 DEPDC1BQ8WUY9 529 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 PIGBQ92521 554 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 KRT35Q92764 455 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 GMPPAQ96IJ6 420 aaPredicted RBP3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 FAM71F1Q96KD3 344 aaPredicted RBP3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 PRAC1Q96KF2 57 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 TMEM237Q96Q45 408 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 TUBB2BQ9BVA1 445 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 ACAT2Q9BWD1 397 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 MTMR12Q9C0I1 747 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 DNAI2Q9GZS0 605 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 FAM49AQ9H0Q0 323 aaPredicted RBP3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 P2RY12Q9H244 342 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 FGF22Q9HCT0 170 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 CHST11Q9NPF2 352 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 TNNQ9UQP3 1299 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 WDR83OSQ9Y284 106 aa3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 RRP15Q9Y3B9 282 aaKnown RBP3.49□□□□□ -1.85
SMARCA1-204ENST00000478420 MEIOCA2RUB1 952 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 CCDC69A6NI79 296 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms