RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 CHERPQ8IWX8 916 aaKnown RBP19.19■□□□□ 0.66
PDLIM1-202ENST00000477757 HMGCLL1Q8TB92 370 aa19.19■□□□□ 0.66
PDLIM1-202ENST00000477757 SDCCAG3Q96C92 435 aa19.19■□□□□ 0.66
PDLIM1-202ENST00000477757 SCMH1Q96GD3 660 aa19.19■□□□□ 0.66
PDLIM1-202ENST00000477757 SIGLEC12Q96PQ1 595 aa19.19■□□□□ 0.66
PDLIM1-202ENST00000477757 DNAJC7Q99615 494 aa19.19■□□□□ 0.66
PDLIM1-202ENST00000477757 TRIM51Q9BSJ1 452 aa19.19■□□□□ 0.66
PDLIM1-202ENST00000477757 YIPF2Q9BWQ6 316 aa19.19■□□□□ 0.66
PDLIM1-202ENST00000477757 HEMGNQ9BXL5 484 aa19.19■□□□□ 0.66
PDLIM1-202ENST00000477757 SPTLC3Q9NUV7 552 aa19.19■□□□□ 0.66
PDLIM1-202ENST00000477757 MBD3O95983 291 aa19.18■□□□□ 0.66
PDLIM1-202ENST00000477757 EEF1DP29692 281 aaKnown RBP19.18■□□□□ 0.66
PDLIM1-202ENST00000477757 TUBA3CQ13748 450 aa19.18■□□□□ 0.66
PDLIM1-202ENST00000477757 NAA25Q14CX7 972 aa19.18■□□□□ 0.66
PDLIM1-202ENST00000477757 ACER2Q5QJU3 275 aa19.18■□□□□ 0.66
PDLIM1-202ENST00000477757 TUBA3EQ6PEY2 450 aa19.18■□□□□ 0.66
PDLIM1-202ENST00000477757 DOLPP1Q86YN1 238 aa19.18■□□□□ 0.66
PDLIM1-202ENST00000477757 ZC3H7AQ8IWR0 971 aaKnown RBP19.18■□□□□ 0.66
PDLIM1-202ENST00000477757 EID3Q8N140 333 aa19.18■□□□□ 0.66
PDLIM1-202ENST00000477757 GHDCQ8N2G8 530 aa19.18■□□□□ 0.66
PDLIM1-202ENST00000477757 OR2A1Q8NGT9 310 aa19.18■□□□□ 0.66
PDLIM1-202ENST00000477757 ACTL9Q8TC94 416 aa19.18■□□□□ 0.66
PDLIM1-202ENST00000477757 LKAAEAR1Q8TD35 194 aa19.18■□□□□ 0.66
PDLIM1-202ENST00000477757 HES7Q9BYE0 225 aa19.18■□□□□ 0.66
PDLIM1-202ENST00000477757 KLHL1Q9NR64 748 aa19.18■□□□□ 0.66
PDLIM1-202ENST00000477757 PPT2Q9UMR5 302 aa19.18■□□□□ 0.66
PDLIM1-202ENST00000477757 CCDC162PA2VCL2 907 aa19.17■□□□□ 0.66
PDLIM1-202ENST00000477757 A8MUI8 341 aa19.17■□□□□ 0.66
PDLIM1-202ENST00000477757 H0YGG7 62 aa19.17■□□□□ 0.66
PDLIM1-202ENST00000477757 ASNA1O43681 348 aa19.17■□□□□ 0.66
PDLIM1-202ENST00000477757 FAM155BO75949 473 aa19.17■□□□□ 0.66
PDLIM1-202ENST00000477757 SEC24DO94855 1032 aaPredicted RBP19.17■□□□□ 0.66
PDLIM1-202ENST00000477757 SLCO2B1O94956 709 aa19.17■□□□□ 0.66
PDLIM1-202ENST00000477757 TSPAN12O95859 305 aa19.17■□□□□ 0.66
PDLIM1-202ENST00000477757 APOA4P06727 396 aa19.17■□□□□ 0.66
PDLIM1-202ENST00000477757 ANXA5P08758 320 aa19.17■□□□□ 0.66
PDLIM1-202ENST00000477757 C8orf89P0DMQ9 161 aa19.17■□□□□ 0.66
PDLIM1-202ENST00000477757 ARF3P61204 181 aaPredicted RBP19.17■□□□□ 0.66
PDLIM1-202ENST00000477757 CCDC181Q5TID7 509 aa19.17■□□□□ 0.66
PDLIM1-202ENST00000477757 PLAG1Q6DJT9 500 aa19.17■□□□□ 0.66
PDLIM1-202ENST00000477757 H3F3CQ6NXT2 135 aa19.17■□□□□ 0.66
PDLIM1-202ENST00000477757 C3P1Q6ZMU1 363 aa19.17■□□□□ 0.66
PDLIM1-202ENST00000477757 ZNF354BQ96LW1 612 aa19.17■□□□□ 0.66
PDLIM1-202ENST00000477757 GBP4Q96PP9 640 aa19.17■□□□□ 0.66
PDLIM1-202ENST00000477757 ALS2CR12Q96Q35 445 aa19.17■□□□□ 0.66
PDLIM1-202ENST00000477757 TSSK1BQ9BXA7 367 aa19.17■□□□□ 0.66
PDLIM1-202ENST00000477757 CXXC4Q9H2H0 198 aa19.17■□□□□ 0.66
PDLIM1-202ENST00000477757 GOLPH3Q9H4A6 298 aa19.17■□□□□ 0.66
PDLIM1-202ENST00000477757 COQ3Q9NZJ6 369 aa19.17■□□□□ 0.66
PDLIM1-202ENST00000477757 MKL2Q9ULH7 1088 aa19.17■□□□□ 0.66
PDLIM1-202ENST00000477757 RUVBL1Q9Y265 456 aaKnown RBP19.17■□□□□ 0.66
PDLIM1-202ENST00000477757 A0A1B0GTL3 188 aa19.16■□□□□ 0.66
PDLIM1-202ENST00000477757 MACROD2A1Z1Q3 448 aa19.16■□□□□ 0.66
PDLIM1-202ENST00000477757 FOXO6A8MYZ6 492 aa19.16■□□□□ 0.66
PDLIM1-202ENST00000477757 PHF2O75151 1096 aa19.16■□□□□ 0.66
PDLIM1-202ENST00000477757 RBP3P10745 1247 aa19.16■□□□□ 0.66
PDLIM1-202ENST00000477757 DNAJA1P31689 397 aaKnown RBP19.16■□□□□ 0.66
PDLIM1-202ENST00000477757 EIF3EP60228 445 aaKnown RBP19.16■□□□□ 0.66
PDLIM1-202ENST00000477757 HSF1Q00613 529 aa19.16■□□□□ 0.66
PDLIM1-202ENST00000477757 OR1C1Q15619 314 aa19.16■□□□□ 0.66
PDLIM1-202ENST00000477757 FCRLBQ6BAA4 426 aa19.16■□□□□ 0.66
PDLIM1-202ENST00000477757 TGIF2LYQ8IUE0 185 aa19.16■□□□□ 0.66
PDLIM1-202ENST00000477757 ARHGEF39Q8N4T4 335 aa19.16■□□□□ 0.66
PDLIM1-202ENST00000477757 RAB42Q8N4Z0 105 aa19.16■□□□□ 0.66
PDLIM1-202ENST00000477757 CSNK1A1LQ8N752 337 aa19.16■□□□□ 0.66
PDLIM1-202ENST00000477757 TMEM178AQ8NBL3 297 aa19.16■□□□□ 0.66
PDLIM1-202ENST00000477757 RAD51AP1Q96B01 352 aa19.16■□□□□ 0.66
PDLIM1-202ENST00000477757 MMABQ96EY8 250 aaPredicted RBP19.16■□□□□ 0.66
PDLIM1-202ENST00000477757 UTP23Q9BRU9 249 aaKnown RBP19.16■□□□□ 0.66
PDLIM1-202ENST00000477757 SYNPO2LQ9H987 977 aa19.16■□□□□ 0.66
PDLIM1-202ENST00000477757 LRRC40Q9H9A6 602 aa19.16■□□□□ 0.66
PDLIM1-202ENST00000477757 NPDC1Q9NQX5 325 aaPredicted RBP19.16■□□□□ 0.66
PDLIM1-202ENST00000477757 ALG6Q9Y672 507 aa19.16■□□□□ 0.66
PDLIM1-202ENST00000477757 FLNAP21333 2647 aaKnown RBP19.15■□□□□ 0.66
PDLIM1-202ENST00000477757 A0A1W2PPV9 198 aa19.15■□□□□ 0.66
PDLIM1-202ENST00000477757 PRRG2O14669 202 aa19.15■□□□□ 0.66
PDLIM1-202ENST00000477757 PJA2O43164 708 aa19.15■□□□□ 0.66
PDLIM1-202ENST00000477757 ZNHIT1O43257 154 aa19.15■□□□□ 0.66
PDLIM1-202ENST00000477757 VPS26AO75436 327 aa19.15■□□□□ 0.66
PDLIM1-202ENST00000477757 CD46P15529 392 aa19.15■□□□□ 0.66
PDLIM1-202ENST00000477757 TPM4P67936 248 aa19.15■□□□□ 0.66
PDLIM1-202ENST00000477757 TMED2Q15363 201 aa19.15■□□□□ 0.66
PDLIM1-202ENST00000477757 HKDC1Q2TB90 917 aa19.15■□□□□ 0.66
PDLIM1-202ENST00000477757 BTBD16Q32M84 506 aa19.15■□□□□ 0.66
PDLIM1-202ENST00000477757 GARNL3Q5VVW2 1013 aa19.15■□□□□ 0.66
PDLIM1-202ENST00000477757 FBXO42Q6P3S6 717 aa19.15■□□□□ 0.66
PDLIM1-202ENST00000477757 TTC23LQ6PF05 361 aa19.15■□□□□ 0.66
PDLIM1-202ENST00000477757 DARS2Q6PI48 645 aaKnown RBP19.15■□□□□ 0.66
PDLIM1-202ENST00000477757 OR8K1Q8NGG5 319 aa19.15■□□□□ 0.66
PDLIM1-202ENST00000477757 OR13J1Q8NGT2 312 aa19.15■□□□□ 0.66
PDLIM1-202ENST00000477757 TTC1Q99614 292 aa19.15■□□□□ 0.66
PDLIM1-202ENST00000477757 DPH7Q9BTV6 452 aa19.15■□□□□ 0.66
PDLIM1-202ENST00000477757 CARD6Q9BX69 1037 aa19.15■□□□□ 0.66
PDLIM1-202ENST00000477757 DRC3Q9H069 523 aa19.15■□□□□ 0.66
PDLIM1-202ENST00000477757 PIH1D1Q9NWS0 290 aaKnown RBP19.15■□□□□ 0.66
PDLIM1-202ENST00000477757 INTUQ9ULD6 942 aa19.15■□□□□ 0.66
PDLIM1-202ENST00000477757 ASB1Q9Y576 335 aa19.15■□□□□ 0.66
PDLIM1-202ENST00000477757 KRT87PA6NCN2 255 aa19.14■□□□□ 0.65
PDLIM1-202ENST00000477757 FOXS1O43638 330 aa19.14■□□□□ 0.65
PDLIM1-202ENST00000477757 CYC1P08574 325 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms