RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 TM9SF1O15321 606 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 DLX3O60479 287 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 CSO75390 466 aaKnown RBP14.75□□□□□ -0.05
SEC13-215ENST00000477547 ZWINTO95229 277 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 FKBP9O95302 570 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 SIX3O95343 332 aaPredicted RBP14.75□□□□□ -0.05
SEC13-215ENST00000477547 MT-CO3P00414 261 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 ANKRD34CP0C6C1 535 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 ST6GAL1P15907 406 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 MAGP20916 626 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 CCKBRP32239 447 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 HPDP32754 393 aaPredicted RBP14.75□□□□□ -0.05
SEC13-215ENST00000477547 GGT5P36269 586 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 LSSP48449 732 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 CDC16Q13042 620 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 NAA25Q14CX7 972 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 PCLAFQ15004 111 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 PDK4Q16654 411 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 KIAA1614Q5VZ46 1190 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 C17orf64Q86WR6 236 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 SLC22A9Q8IVM8 553 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 CARFQ8N187 725 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 ANKRD42Q8N9B4 389 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 C19orf47Q8N9M1 422 aaKnown RBP14.75□□□□□ -0.05
SEC13-215ENST00000477547 RCBTB1Q8NDN9 531 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 ADAMTS14Q8WXS8 1223 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 CCDC126Q96EE4 140 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 TMEM237Q96Q45 408 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 OR4K3Q96R72 315 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 CD244Q9BZW8 370 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 C1GALT1Q9NS00 363 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 INTS7Q9NVH2 962 aaKnown RBP14.75□□□□□ -0.05
SEC13-215ENST00000477547 CUEDC1Q9NWM3 386 aaPredicted RBP14.75□□□□□ -0.05
SEC13-215ENST00000477547 COPG2Q9UBF2 871 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 TNPO3Q9Y5L0 923 aaKnown RBP14.75□□□□□ -0.05
SEC13-215ENST00000477547 IGHV5-51A0A0C4DH38 117 aa14.74□□□□□ -0.05
SEC13-215ENST00000477547 SLC9B1P1A6NJY1 282 aa14.74□□□□□ -0.05
SEC13-215ENST00000477547 K7EPI3 171 aa14.74□□□□□ -0.05
SEC13-215ENST00000477547 TOX3O15405 576 aaPredicted RBP14.74□□□□□ -0.05
SEC13-215ENST00000477547 ATP8B1O43520 1251 aa14.74□□□□□ -0.05
SEC13-215ENST00000477547 RPS17P08708 135 aaKnown RBP14.74□□□□□ -0.05
SEC13-215ENST00000477547 CDH1P12830 882 aa14.74□□□□□ -0.05
SEC13-215ENST00000477547 CPA3P15088 417 aa14.74□□□□□ -0.05
SEC13-215ENST00000477547 MLLT3P42568 568 aaPredicted RBP14.74□□□□□ -0.05
SEC13-215ENST00000477547 SEPHS1P49903 392 aa14.74□□□□□ -0.05
SEC13-215ENST00000477547 YBX1P67809 324 aaKnown RBP14.74□□□□□ -0.05
SEC13-215ENST00000477547 ABATP80404 500 aa14.74□□□□□ -0.05
SEC13-215ENST00000477547 TRA2AQ13595 282 aaKnown RBP eCLIP14.74□□□□□ -0.05
SEC13-215ENST00000477547 PCBP2Q15366 365 aaKnown RBP eCLIP14.74□□□□□ -0.05
SEC13-215ENST00000477547 ISXQ2M1V0 245 aa14.74□□□□□ -0.05
SEC13-215ENST00000477547 ADCK2Q7Z695 626 aa14.74□□□□□ -0.05
SEC13-215ENST00000477547 TMPRSS11BQ86T26 416 aa14.74□□□□□ -0.05
SEC13-215ENST00000477547 STRADBQ9C0K7 418 aa14.74□□□□□ -0.05
SEC13-215ENST00000477547 ZNF768Q9H5H4 540 aaKnown RBP14.74□□□□□ -0.05
SEC13-215ENST00000477547 PDP2Q9P2J9 529 aa14.74□□□□□ -0.05
SEC13-215ENST00000477547 KLHL20Q9Y2M5 609 aa14.74□□□□□ -0.05
SEC13-215ENST00000477547 ANGPTL3Q9Y5C1 460 aa14.74□□□□□ -0.05
SEC13-215ENST00000477547 ASH1LQ9NR48 2969 aaKnown RBP14.74□□□□□ -0.05
SEC13-215ENST00000477547 AGRPO00253 132 aa14.73□□□□□ -0.05
SEC13-215ENST00000477547 E2F3O00716 465 aa14.73□□□□□ -0.05
SEC13-215ENST00000477547 ZBTB11O95625 1053 aaPredicted RBP14.73□□□□□ -0.05
SEC13-215ENST00000477547 ETV4P43268 484 aa14.73□□□□□ -0.05
SEC13-215ENST00000477547 PIK3CGP48736 1102 aa14.73□□□□□ -0.05
SEC13-215ENST00000477547 ARL4DP49703 201 aa14.73□□□□□ -0.05
SEC13-215ENST00000477547 HERVK_113P63132 956 aa14.73□□□□□ -0.05
SEC13-215ENST00000477547 PRDX1Q06830 199 aaKnown RBP14.73□□□□□ -0.05
SEC13-215ENST00000477547 ZFP36L1Q07352 338 aaKnown RBP14.73□□□□□ -0.05
SEC13-215ENST00000477547 C16orf72Q14CZ0 275 aa14.73□□□□□ -0.05
SEC13-215ENST00000477547 HSP90B2PQ58FF3 399 aa14.73□□□□□ -0.05
SEC13-215ENST00000477547 KMT5CQ86Y97 462 aa14.73□□□□□ -0.05
SEC13-215ENST00000477547 TEX9Q8N6V9 391 aa14.73□□□□□ -0.05
SEC13-215ENST00000477547 DCBLD1Q8N8Z6 715 aa14.73□□□□□ -0.05
SEC13-215ENST00000477547 MDM1Q8TC05 714 aa14.73□□□□□ -0.05
SEC13-215ENST00000477547 SLC5A11Q8WWX8 675 aa14.73□□□□□ -0.05
SEC13-215ENST00000477547 NEIL2Q969S2 332 aa14.73□□□□□ -0.05
SEC13-215ENST00000477547 TRAPPC9Q96Q05 1148 aa14.73□□□□□ -0.05
SEC13-215ENST00000477547 DPH7Q9BTV6 452 aa14.73□□□□□ -0.05
SEC13-215ENST00000477547 MECRQ9BV79 373 aa14.73□□□□□ -0.05
SEC13-215ENST00000477547 ERVK-6Q9BXR3 956 aa14.73□□□□□ -0.05
SEC13-215ENST00000477547 NKIRAS1Q9NYS0 192 aa14.73□□□□□ -0.05
SEC13-215ENST00000477547 ANKMY1Q9P2S6 941 aa14.73□□□□□ -0.05
SEC13-215ENST00000477547 PCTPQ9UKL6 214 aa14.73□□□□□ -0.05
SEC13-215ENST00000477547 KCNE2Q9Y6J6 123 aa14.73□□□□□ -0.05
SEC13-215ENST00000477547 IGKV1-8A0A0C4DH67 115 aa14.72□□□□□ -0.05
SEC13-215ENST00000477547 E7EQ34 232 aa14.72□□□□□ -0.05
SEC13-215ENST00000477547 TMX2-CTNND1H3BSU7 103 aa14.72□□□□□ -0.05
SEC13-215ENST00000477547 HGSO14964 777 aaPredicted RBP14.72□□□□□ -0.05
SEC13-215ENST00000477547 NRP2O60462 931 aa14.72□□□□□ -0.05
SEC13-215ENST00000477547 NPPBP16860 134 aa14.72□□□□□ -0.05
SEC13-215ENST00000477547 GNAZP19086 355 aa14.72□□□□□ -0.05
SEC13-215ENST00000477547 GRIA3P42263 894 aa14.72□□□□□ -0.05
SEC13-215ENST00000477547 SERPINB4P48594 390 aa14.72□□□□□ -0.05
SEC13-215ENST00000477547 PRKAA2P54646 552 aa14.72□□□□□ -0.05
SEC13-215ENST00000477547 GTF2H2Q13888 395 aa14.72□□□□□ -0.05
SEC13-215ENST00000477547 MPP2Q14168 576 aa14.72□□□□□ -0.05
SEC13-215ENST00000477547 LIPMQ5VYY2 423 aa14.72□□□□□ -0.05
SEC13-215ENST00000477547 GTF2H2CQ6P1K8 395 aa14.72□□□□□ -0.05
SEC13-215ENST00000477547 METTL2BQ6P1Q9 378 aaKnown RBP14.72□□□□□ -0.05
SEC13-215ENST00000477547 GOLGA7Q7Z5G4 137 aa14.72□□□□□ -0.05
SEC13-215ENST00000477547 ARHGAP22Q7Z5H3 698 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms