RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 FBXL13Q8NEE6 735 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 ZSWIM2Q8NEG5 633 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 ZNF680Q8NEM1 530 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 OR52E4Q8NGH9 312 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 ACTL9Q8TC94 416 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 MAGEE2Q8TD90 523 aaPredicted RBP4.59□□□□□ -1.67
PTCD3-212ENST00000477520 UTP15Q8TED0 518 aaKnown RBP4.59□□□□□ -1.67
PTCD3-212ENST00000477520 SETD7Q8WTS6 366 aaKnown RBP4.59□□□□□ -1.67
PTCD3-212ENST00000477520 FAR1Q8WVX9 515 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 COPS5Q92905 334 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 USP13Q92995 863 aaPredicted RBP4.59□□□□□ -1.67
PTCD3-212ENST00000477520 GJA10Q969M2 543 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 YIPF5Q969M3 257 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 TBC1D20Q96BZ9 403 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 MTERF3Q96E29 417 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 TEKT5Q96M29 485 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 MUS81Q96NY9 551 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 WDFY2Q96P53 400 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 DCLRE1CQ96SD1 692 aaKnown RBP4.59□□□□□ -1.67
PTCD3-212ENST00000477520 PARK7Q99497 189 aaKnown RBP4.59□□□□□ -1.67
PTCD3-212ENST00000477520 IL12RB2Q99665 862 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 SLC30A2Q9BRI3 323 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 TCEAL7Q9BRU2 100 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 HERPUD2Q9BSE4 406 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 TRMOQ9BU70 441 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 SPATA9Q9BWV2 254 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 BTBD2Q9BX70 525 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 ROGDIQ9GZN7 287 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 DCSTAMPQ9H295 470 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 LHX5Q9H2C1 402 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 C12orf65Q9H3J6 166 aaKnown RBP4.59□□□□□ -1.67
PTCD3-212ENST00000477520 DUSP21Q9H596 190 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 NT5DC2Q9H857 520 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 PLEKHA5Q9HAU0 1116 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 POPDC2Q9HBU9 364 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 ACP6Q9NPH0 428 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 EIF2B3Q9NR50 452 aaKnown RBP4.59□□□□□ -1.67
PTCD3-212ENST00000477520 GKN1Q9NS71 199 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 OXSMQ9NWU1 459 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 UCKL1Q9NWZ5 548 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 FBXL12Q9NXK8 326 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 ERAP1Q9NZ08 941 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 TMEM216Q9P0N5 145 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 OPTCQ9UBM4 332 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 DNAJB9Q9UBS3 223 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 MORF4L1Q9UBU8 362 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 TMPRSS11EQ9UL52 423 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 OAZ3Q9UMX2 235 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 KLK4Q9Y5K2 254 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 DGKBQ9Y6T7 804 aa4.59□□□□□ -1.67
PTCD3-212ENST00000477520 RBBP6Q7Z6E9 1792 aaKnown RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 FRMPD2Q68DX3 1309 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 A0A0G2JMP0 313 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 PRORSD1PA6NEY8 169 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 OR6C70A6NIJ9 312 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 SLC15A5A6NIM6 579 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 GOLGA8SH3BPF8 625 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 TMX2-CTNND1H3BSU7 103 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 PDHXO00330 501 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 SLC1A7O00341 560 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 IFRD1O00458 451 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 TSPAN4O14817 238 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 UBDO15205 165 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 CLIC2O15247 247 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 RGS5O15539 181 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 SSX5O60225 188 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 USP12O75317 370 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 PEX14O75381 377 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 LRCH4O75427 683 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 VPS26AO75436 327 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 PPM1BO75688 479 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 PIAS1O75925 651 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 TMEM63AO94886 807 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 AHSGP02765 367 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 S100A8P05109 93 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 ALPLP05186 524 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 RPLP0P05388 317 aaKnown RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 HMBSP08397 361 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 RAP2AP10114 183 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 RRASP10301 218 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 CYP2A6P11509 494 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 COL6A1P12109 1028 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 IL1RNP18510 177 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 NELFEP18615 380 aaKnown RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 CD58P19256 250 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 EFNA1P20827 205 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 KELP23276 732 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 CDH5P33151 784 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 POLR2IP36954 125 aaKnown RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 PIK3CBP42338 1070 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 DPP6P42658 865 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 PPP3CCP48454 512 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 NR2C2P49116 596 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 ALDH9A1P49189 494 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 GDI2P50395 445 aaKnown RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 RAB13P51153 203 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 CYP2J2P51589 502 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 ZNF143P52747 638 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 HK3P52790 923 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 OAZ1P54368 228 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms