RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 CD48P09326 243 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 GZMAP12544 262 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 TFEBP19484 476 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 ITGALP20701 1170 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 PTMSP20962 102 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 PEBP1P30086 187 aaKnown RBP6.94□□□□□ -1.3
PRPF3-205ENST00000476970 PKLRP30613 574 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 SSR1P43307 286 aaKnown RBP6.94□□□□□ -1.3
PRPF3-205ENST00000476970 PLOD1Q02809 727 aaPredicted RBP6.94□□□□□ -1.3
PRPF3-205ENST00000476970 NAA25Q14CX7 972 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 PDK1Q15118 436 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 EXT1Q16394 746 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 SYTL3Q4VX76 610 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 CATSPEREQ5SY80 951 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 FCRLBQ6BAA4 426 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 FIGLAQ6QHK4 219 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 CAPN12Q6ZSI9 719 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 CRLF3Q8IUI8 442 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 LRRC75A-AS1Q8N1F1 130 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 NIPA2Q8N8Q9 360 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 KCTD6Q8NC69 237 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 ANKK1Q8NFD2 765 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 SPATA22Q8NHS9 363 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 LRRN4Q8WUT4 740 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 NAT14Q8WUY8 206 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 ZUFSPQ96AP4 578 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 CABS1Q96KC9 395 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 CEP41Q9BYV8 373 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 GLOD4Q9HC38 313 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 MYO1AQ9UBC5 1043 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 TRPS1Q9UHF7 1281 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 IP6K2Q9UHH9 426 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 FAM153AQ9UHL3 310 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 CBLCQ9ULV8 474 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 KLHL20Q9Y2M5 609 aa6.94□□□□□ -1.3
PRPF3-205ENST00000476970 KLF13Q9Y2Y9 288 aaPredicted RBP6.94□□□□□ -1.3
PRPF3-205ENST00000476970 LOC285095A0A1B0GVY8 99 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 TARM1B6A8C7 271 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 KLRC4-KLRK1H3BQV0 150 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 QSOX1O00391 747 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 CES2O00748 559 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 BUD23O43709 281 aaKnown RBP6.93□□□□□ -1.3
PRPF3-205ENST00000476970 FTLP02792 175 aaPredicted RBP6.93□□□□□ -1.3
PRPF3-205ENST00000476970 RPN2P04844 631 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 CDK11BP21127 795 aaKnown RBP6.93□□□□□ -1.3
PRPF3-205ENST00000476970 PTPN3P26045 913 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 ACVR2AP27037 513 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 UQCRC1P31930 480 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 GJC1P36383 396 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 GRIA3P42263 894 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 CYB561P49447 251 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 ARSEP51690 589 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 WNT3AP56704 352 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 LAPTM4AQ15012 233 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 DAZAP2Q15038 168 aaPredicted RBP6.93□□□□□ -1.3
PRPF3-205ENST00000476970 SF1Q15637 639 aaKnown RBP6.93□□□□□ -1.3
PRPF3-205ENST00000476970 ZNF658BQ4V348 819 aaPredicted RBP6.93□□□□□ -1.3
PRPF3-205ENST00000476970 FIGNQ5HY92 759 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 SIRPB2Q5JXA9 342 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 RNFT1Q5M7Z0 435 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 HMBOX1Q6NT76 420 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 B3GNT6Q6ZMB0 384 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 CPEB2Q7Z5Q1 589 aaKnown RBP6.93□□□□□ -1.3
PRPF3-205ENST00000476970 WDR53Q7Z5U6 358 aaPredicted RBP6.93□□□□□ -1.3
PRPF3-205ENST00000476970 SNX20Q7Z614 316 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 RPRMLQ8N4K4 120 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 DTWD1Q8N5C7 304 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 SLC25A41Q8N5S1 370 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 M1APQ8TC57 530 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 CREB3L4Q8TEY5 395 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 FAF2Q96CS3 445 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 C10orf90Q96M02 699 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 Q96MF0 132 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 FICDQ9BVA6 458 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 RAB11FIP5Q9BXF6 653 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 FSD1LQ9BXM9 530 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 UBP1Q9NZI7 540 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 ZC3H7BQ9UGR2 993 aaKnown RBP6.93□□□□□ -1.3
PRPF3-205ENST00000476970 FKBPLQ9UIM3 349 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 FOXD3Q9UJU5 478 aaPredicted RBP6.93□□□□□ -1.3
PRPF3-205ENST00000476970 PLAGL1Q9UM63 463 aa6.93□□□□□ -1.3
PRPF3-205ENST00000476970 AGAP14A8MT82 685 aa6.92□□□□□ -1.3
PRPF3-205ENST00000476970 BCKDKO14874 412 aa6.92□□□□□ -1.3
PRPF3-205ENST00000476970 HS6ST1O60243 411 aa6.92□□□□□ -1.3
PRPF3-205ENST00000476970 SMPD2O60906 423 aa6.92□□□□□ -1.3
PRPF3-205ENST00000476970 PHF2O75151 1096 aa6.92□□□□□ -1.3
PRPF3-205ENST00000476970 VPS26AO75436 327 aa6.92□□□□□ -1.3
PRPF3-205ENST00000476970 AP2A2O94973 939 aa6.92□□□□□ -1.3
PRPF3-205ENST00000476970 MBD3O95983 291 aa6.92□□□□□ -1.3
PRPF3-205ENST00000476970 FTH1P02794 183 aa6.92□□□□□ -1.3
PRPF3-205ENST00000476970 EIF2S1P05198 315 aaKnown RBP6.92□□□□□ -1.3
PRPF3-205ENST00000476970 CD53P19397 219 aa6.92□□□□□ -1.3
PRPF3-205ENST00000476970 CD9P21926 228 aa6.92□□□□□ -1.3
PRPF3-205ENST00000476970 SLC26A3P40879 764 aa6.92□□□□□ -1.3
PRPF3-205ENST00000476970 AGTR2P50052 363 aa6.92□□□□□ -1.3
PRPF3-205ENST00000476970 SLC10A2Q12908 348 aaPredicted RBP6.92□□□□□ -1.3
PRPF3-205ENST00000476970 CBLBQ13191 982 aa6.92□□□□□ -1.3
PRPF3-205ENST00000476970 NOMO1Q15155 1222 aa6.92□□□□□ -1.3
PRPF3-205ENST00000476970 SLC1A5Q15758 541 aa6.92□□□□□ -1.3
PRPF3-205ENST00000476970 GPR33Q49SQ1 333 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms