RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 ACACAQ13085 2346 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 ZFHX4Q86UP3 3567 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 LAMA5O15230 3695 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 DMXL2Q8TDJ6 3036 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 A8MT66 165 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 CDRT15L2A8MXV6 281 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 B4E171 279 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 C9orf172C9J069 976 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 DYNC1I1O14576 645 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 COPEO14579 308 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 POLR1CO15160 346 aaPredicted RBP13.84□□□□□ -0.19
CCNL1-217ENST00000476367 SIX3O95343 332 aaPredicted RBP13.84□□□□□ -0.19
CCNL1-217ENST00000476367 SLC5A2P31639 672 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 HSD17B2P37059 387 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 TSPAN7P41732 249 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 CCT5P48643 541 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 RAB15P59190 212 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 MC2RQ01718 297 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 SETDB1Q15047 1291 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 GPR19Q15760 415 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 ZIC1Q15915 447 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 PFKFB4Q16877 469 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 DEFB110Q30KQ9 67 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 TMTC4Q5T4D3 741 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 TMEM164Q5U3C3 297 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 AGBL2Q5U5Z8 902 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 KIAA1614Q5VZ46 1190 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 KLC3Q6P597 504 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 IGF2-ASQ6U949 168 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 D2HGDHQ8N465 521 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 OR2L3Q8NG85 312 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 UBTD2Q8WUN7 234 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 CNTNAP3BQ96NU0 1288 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 TAAR9Q96RI9 348 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 EGFL8Q99944 293 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 CNTNAP3Q9BZ76 1288 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 PDE7BQ9NP56 450 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 SSU72Q9NP77 194 aaKnown RBP13.84□□□□□ -0.19
CCNL1-217ENST00000476367 CCDC177Q9NQR7 707 aaPredicted RBP13.84□□□□□ -0.19
CCNL1-217ENST00000476367 ACSS2Q9NR19 701 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 NUDT4Q9NZJ9 180 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 SENP1Q9P0U3 644 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 GRID1Q9ULK0 1009 aa13.84□□□□□ -0.19
CCNL1-217ENST00000476367 MAP1BP46821 2468 aaKnown RBP13.84□□□□□ -0.19
CCNL1-217ENST00000476367 EPG5Q9HCE0 2579 aa13.83□□□□□ -0.19
CCNL1-217ENST00000476367 SUPT3HB4E1H0 165 aa13.83□□□□□ -0.2
CCNL1-217ENST00000476367 PRPF4O43172 522 aaKnown RBP eCLIP13.83□□□□□ -0.23e-6■■■□□ 15.4
CCNL1-217ENST00000476367 HCRTR1O43613 425 aa13.83□□□□□ -0.2
CCNL1-217ENST00000476367 SUPT3HO75486 399 aa13.83□□□□□ -0.2
CCNL1-217ENST00000476367 ANXA5P08758 320 aa13.83□□□□□ -0.2
CCNL1-217ENST00000476367 HSPA7P48741 367 aa13.83□□□□□ -0.2
CCNL1-217ENST00000476367 HNMTP50135 292 aa13.83□□□□□ -0.2
CCNL1-217ENST00000476367 ERVPABLB-1P60509 514 aa13.83□□□□□ -0.2
CCNL1-217ENST00000476367 DCAF12Q5T6F0 453 aa13.83□□□□□ -0.2
CCNL1-217ENST00000476367 CES4AQ5XG92 561 aa13.83□□□□□ -0.2
CCNL1-217ENST00000476367 FAM219BQ5XKK7 198 aa13.83□□□□□ -0.2
CCNL1-217ENST00000476367 SULT1C3Q6IMI6 304 aa13.83□□□□□ -0.2
CCNL1-217ENST00000476367 RPS27LQ71UM5 84 aaKnown RBP13.83□□□□□ -0.2
CCNL1-217ENST00000476367 PHF21BQ96EK2 531 aa13.83□□□□□ -0.2
CCNL1-217ENST00000476367 SCYL1Q96KG9 808 aa13.83□□□□□ -0.2
CCNL1-217ENST00000476367 ZNF578Q96N58 590 aaPredicted RBP13.83□□□□□ -0.2
CCNL1-217ENST00000476367 FAM111AQ96PZ2 611 aa13.83□□□□□ -0.2
CCNL1-217ENST00000476367 SMC6Q96SB8 1091 aa13.83□□□□□ -0.2
CCNL1-217ENST00000476367 FAM60AQ9NP50 221 aa13.83□□□□□ -0.2
CCNL1-217ENST00000476367 SLC6A20Q9NP91 592 aa13.83□□□□□ -0.2
CCNL1-217ENST00000476367 FGF21Q9NSA1 209 aa13.83□□□□□ -0.2
CCNL1-217ENST00000476367 CD274Q9NZQ7 290 aa13.83□□□□□ -0.2
CCNL1-217ENST00000476367 SLC22A14Q9Y267 594 aa13.83□□□□□ -0.2
CCNL1-217ENST00000476367 PCDHB11Q9Y5F2 797 aa13.83□□□□□ -0.2
CCNL1-217ENST00000476367 CFAP47Q6ZTR5 3102 aa13.83□□□□□ -0.2
CCNL1-217ENST00000476367 A0A1B0GTL3 188 aa13.82□□□□□ -0.2
CCNL1-217ENST00000476367 MAP3K7O43318 606 aa13.82□□□□□ -0.2
CCNL1-217ENST00000476367 TLX3O43711 291 aaPredicted RBP13.82□□□□□ -0.2
CCNL1-217ENST00000476367 DHRS4L1P0CG22 281 aa13.82□□□□□ -0.2
CCNL1-217ENST00000476367 CMPK1P30085 196 aa13.82□□□□□ -0.2
CCNL1-217ENST00000476367 ALDH18A1P54886 795 aaKnown RBP13.82□□□□□ -0.2
CCNL1-217ENST00000476367 NFKB2Q00653 900 aa13.82□□□□□ -0.2
CCNL1-217ENST00000476367 PCLAFQ15004 111 aa13.82□□□□□ -0.2
CCNL1-217ENST00000476367 PRAMEF13Q5VWM6 474 aa13.82□□□□□ -0.2
CCNL1-217ENST00000476367 CEACAM20Q6UY09 585 aa13.82□□□□□ -0.2
CCNL1-217ENST00000476367 ATG14Q6ZNE5 492 aa13.82□□□□□ -0.2
CCNL1-217ENST00000476367 NAF1Q96HR8 494 aaKnown RBP13.82□□□□□ -0.2
CCNL1-217ENST00000476367 ATP6V1G3Q96LB4 118 aa13.82□□□□□ -0.2
CCNL1-217ENST00000476367 DDA1Q9BW61 102 aa13.82□□□□□ -0.2
CCNL1-217ENST00000476367 CD244Q9BZW8 370 aa13.82□□□□□ -0.2
CCNL1-217ENST00000476367 ZBTB26Q9HCK0 441 aa13.82□□□□□ -0.2
CCNL1-217ENST00000476367 FBXO8Q9NRD0 319 aa13.82□□□□□ -0.2
CCNL1-217ENST00000476367 WDR70Q9NW82 654 aa13.82□□□□□ -0.2
CCNL1-217ENST00000476367 CUEDC1Q9NWM3 386 aaPredicted RBP13.82□□□□□ -0.2
CCNL1-217ENST00000476367 DKK4Q9UBT3 224 aa13.82□□□□□ -0.2
CCNL1-217ENST00000476367 PCDHGA7Q9Y5G6 932 aa13.82□□□□□ -0.2
CCNL1-217ENST00000476367 KLK4Q9Y5K2 254 aa13.82□□□□□ -0.2
CCNL1-217ENST00000476367 AHCTF1Q8WYP5 2266 aa13.82□□□□□ -0.2
CCNL1-217ENST00000476367 FER1L5A0AVI2 2057 aa13.82□□□□□ -0.2
CCNL1-217ENST00000476367 SYCE1LA8MT33 242 aa13.82□□□□□ -0.2
CCNL1-217ENST00000476367 TMEM150CB9EJG8 249 aa13.82□□□□□ -0.2
CCNL1-217ENST00000476367 E2F3O00716 465 aa13.82□□□□□ -0.2
CCNL1-217ENST00000476367 NVLO15381 856 aaKnown RBP13.82□□□□□ -0.2
CCNL1-217ENST00000476367 WDR4P57081 412 aaKnown RBP13.82□□□□□ -0.2
CCNL1-217ENST00000476367 PCBP4P57723 403 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms