RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 NKG7Q16617 165 aa12.09□□□□□ -0.47
RNF220-211ENST00000474956 MEP1AQ16819 746 aa12.09□□□□□ -0.47
RNF220-211ENST00000474956 LDLRAP1Q5SW96 308 aa12.09□□□□□ -0.47
RNF220-211ENST00000474956 SVOPLQ8N434 492 aa12.09□□□□□ -0.47
RNF220-211ENST00000474956 MINDY2Q8NBR6 621 aa12.09□□□□□ -0.47
RNF220-211ENST00000474956 FRS2Q8WU20 508 aa12.09□□□□□ -0.47
RNF220-211ENST00000474956 SLC35B4Q969S0 331 aa12.09□□□□□ -0.47
RNF220-211ENST00000474956 ULK4Q96C45 1275 aa12.09□□□□□ -0.47
RNF220-211ENST00000474956 INPP5KQ9BT40 448 aa12.09□□□□□ -0.47
RNF220-211ENST00000474956 GORASP2Q9H8Y8 452 aa12.09□□□□□ -0.47
RNF220-211ENST00000474956 USE1Q9NZ43 259 aa12.09□□□□□ -0.47
RNF220-211ENST00000474956 TNPO3Q9Y5L0 923 aaKnown RBP12.09□□□□□ -0.47
RNF220-211ENST00000474956 DGKBQ9Y6T7 804 aa12.09□□□□□ -0.47
RNF220-211ENST00000474956 WASH3PC4AMC7 463 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 K7ESM1 405 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 POP4O95707 220 aaKnown RBP12.08□□□□□ -0.48
RNF220-211ENST00000474956 EPB42P16452 691 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 ITIH1P19827 911 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 RAD23AP54725 363 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 PPP2R2BQ00005 443 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 PWP1Q13610 501 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 FAM109BQ6ICB4 259 aaPredicted RBP12.08□□□□□ -0.48
RNF220-211ENST00000474956 HS3ST5Q8IZT8 346 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 OR8J3Q8NGG0 315 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 OR10A6Q8NH74 314 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 S100ZQ8WXG8 99 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 NXPE3Q969Y0 559 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 APIPQ96GX9 242 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 CCDC115Q96NT0 180 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 RBM4BQ9BQ04 359 aaKnown RBP12.08□□□□□ -0.48
RNF220-211ENST00000474956 RBM4Q9BWF3 364 aaKnown RBP12.08□□□□□ -0.48
RNF220-211ENST00000474956 SMURF2Q9HAU4 748 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 ERVW-1Q9UQF0 538 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 LRRK1Q38SD2 2015 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 CST1P01037 141 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 CD22P20273 847 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 PDHA2P29803 388 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 CDKN2CP42773 168 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 EIF2B2P49770 351 aaKnown RBP12.08□□□□□ -0.48
RNF220-211ENST00000474956 GPR33Q49SQ1 333 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 ENPP6Q6UWR7 440 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 GALNT10Q86SR1 603 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 MBOAT4Q96T53 435 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 AMBRA1Q9C0C7 1298 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 TIMP2P16035 220 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 FUT4P22083 530 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 GJA8P48165 433 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 HTRA4P83105 476 aaPredicted RBP12.08□□□□□ -0.48
RNF220-211ENST00000474956 CD47Q08722 323 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 SLC14A1Q13336 389 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 DDX39BQ13838 428 aaKnown RBP12.08□□□□□ -0.48
RNF220-211ENST00000474956 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.08□□□□□ -0.48
RNF220-211ENST00000474956 SPPL3Q8TCT6 385 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 ELMO1Q92556 727 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 CLP1Q92989 425 aaKnown RBP12.08□□□□□ -0.48
RNF220-211ENST00000474956 VMP1Q96GC9 406 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 ZNF641Q96N77 438 aaPredicted RBP12.08□□□□□ -0.48
RNF220-211ENST00000474956 ZNF583Q96ND8 569 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 NODALQ96S42 347 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 BCL7BQ9BQE9 202 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 LRTM1Q9HBL6 345 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 KCTD5Q9NXV2 234 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 NAALAD2Q9Y3Q0 740 aa12.08□□□□□ -0.48
RNF220-211ENST00000474956 TMEM247A6NEH6 219 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 GNGT2O14610 69 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 GSTA4O15217 222 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 TSPAN6O43657 245 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 CNOT3O75175 753 aaKnown RBP12.07□□□□□ -0.48
RNF220-211ENST00000474956 BCKDHAP12694 445 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 ATP1B2P14415 290 aaPredicted RBP12.07□□□□□ -0.48
RNF220-211ENST00000474956 MAPK8P45983 427 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 KCNAB2Q13303 367 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 ZNF77Q15935 545 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 CTF1Q16619 201 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 DPY19L1Q2PZI1 675 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 CTU2Q2VPK5 515 aaKnown RBP12.07□□□□□ -0.48
RNF220-211ENST00000474956 NECAB2Q7Z6G3 386 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 CBARPQ8N350 705 aaPredicted RBP12.07□□□□□ -0.48
RNF220-211ENST00000474956 PIK3C3Q8NEB9 887 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 OR2T12Q8NG77 320 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 FIG4Q92562 907 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 GTF2H4Q92759 462 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 AKIP1Q9NQ31 210 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 C3orf18Q9UK00 162 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 KIAA0355O15063 1070 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 NDUFS2O75306 463 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 ALOX5P09917 674 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 NR4A1P22736 598 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 HPCAL1P37235 193 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 PIGAP37287 484 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 BDKRB1P46663 353 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 SLC6A11P48066 632 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 FBXO30Q8TB52 745 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 ASB11Q8WXH4 323 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 SAMD11Q96NU1 681 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 MTERF1Q99551 399 aaKnown RBP12.07□□□□□ -0.48
RNF220-211ENST00000474956 IL23AQ9NPF7 189 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 PPT2Q9UMR5 302 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 ERVK-11Q9UQG0 969 aa12.07□□□□□ -0.48
RNF220-211ENST00000474956 HTR3EA5X5Y0 456 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms