RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 CFDP00746 253 aaPredicted RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 PTHP01270 115 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 IL1AP01583 271 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 SELLP14151 372 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 HMGA1P17096 107 aaKnown RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 SMPD1P17405 629 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 GPX2P18283 190 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 NCF2P19878 526 aaPredicted RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 GTF2E2P29084 291 aaKnown RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 HOXA13P31271 388 aaPredicted RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 CTSKP43235 329 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 CLCN7P51798 805 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 CREMQ03060 361 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 DMPKQ09013 629 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 IL10RAQ13651 578 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 BOP1Q14137 746 aaKnown RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 PCBP2Q15366 365 aaKnown RBP eCLIP3.98□□□□□ -1.77
USP16-205ENST00000474835 GRK1Q15835 563 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 ARSIQ5FYB1 569 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 TAF2Q6P1X5 1199 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 CYP2R1Q6VVX0 501 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 CAPN12Q6ZSI9 719 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 CBLL1Q75N03 491 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 KCNMB4Q86W47 210 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 TRIM69Q86WT6 500 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 SLC22A9Q8IVM8 553 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 BBS7Q8IWZ6 715 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 EMC1Q8N766 993 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 DENND6BQ8NEG7 585 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 NPLOC4Q8TAT6 608 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 DEDD2Q8WXF8 326 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 ADAMTS14Q8WXS8 1223 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 RNF166Q96A37 237 aaPredicted RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 TESCQ96BS2 214 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 CDKN2AIPNLQ96HQ2 116 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 SERPINB11Q96P15 392 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 VAT1Q99536 393 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 PDCD2LQ9BRP1 358 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 FAM213AQ9BRX8 229 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 SPATA9Q9BWV2 254 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 TFB2MQ9H5Q4 396 aaKnown RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 EPS8L2Q9H6S3 715 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 RBFOX1Q9NWB1 397 aaKnown RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 STMN3Q9NZ72 180 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 EMC3Q9P0I2 261 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 VAPAQ9P0L0 249 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 ATP11BQ9Y2G3 1177 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 KCTD3Q9Y597 815 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 SHISA3A0PJX4 238 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 SH3D21A4FU49 640 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 RRN3P2A6NIE6 340 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 ZNF98A6NK75 572 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 G3V2T6 193 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 H7C0C1 242 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 ZNF749O43361 778 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 GSTZ1O43708 216 aaPredicted RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 AKAP8O43823 692 aaKnown RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 SCELO95171 688 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 APRTP07741 180 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 HMBSP08397 361 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 HOXC4P09017 264 aaPredicted RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 HBQ1P09105 142 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 IL10P22301 178 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 MNDAP41218 407 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 MAPKAPK2P49137 400 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 PCYT1AP49585 367 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 ACOT2P49753 483 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 DGKQP52824 942 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 TAS2R39P59534 338 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 ERVK-8P63133 956 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 SLC14A1Q13336 389 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 SMN1Q16637 294 aaKnown RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 DUSP6Q16828 381 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 HADHQ16836 314 aaKnown RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 SLC25A52Q3SY17 297 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 ZNF658BQ4V348 819 aaPredicted RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 USP39Q53GS9 565 aaKnown RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 ARHGAP15Q53QZ3 475 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 PDSS1Q5T2R2 415 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 ATPAF1Q5TC12 328 aaPredicted RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 PXDC1Q5TGL8 231 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 CASP12Q6UXS9 341 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 ZNF704Q6ZNC4 412 aaPredicted RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 KIAA0907Q7Z7F0 614 aaPredicted RBP3.98□□□□□ -1.77
USP16-205ENST00000474835 ABI3BPQ7Z7G0 1075 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 HIPK1Q86Z02 1210 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 TMEM130Q8N3G9 435 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 STPG2Q8N412 459 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 CPXM2Q8N436 756 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 HIPK4Q8NE63 616 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 GPR151Q8TDV0 419 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 PROX1Q92786 737 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 LPPQ93052 612 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 FBXW5Q969U6 566 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 NXPE2Q96DL1 559 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 ZNF382Q96SR6 550 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 PHOX2BQ99453 314 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 ADPGKQ9BRR6 497 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 WACQ9BTA9 647 aa3.98□□□□□ -1.77
USP16-205ENST00000474835 TRPV6Q9H1D0 765 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms