RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, human

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM50B-208	ENST00000474272	ART5	Q96L15	291 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	URM1	Q9BTM9	101 aa	Known RBP	3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	UBXN6	Q9BZV1	441 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	XAB2	Q9HCS7	855 aa	Known RBP	3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	FGF21	Q9NSA1	209 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	ECHDC1	Q9NTX5	307 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	RNF215	Q9Y6U7	377 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	TOP2B	Q02880	1626 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	SETD5	Q9C0A6	1442 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	HEG1	Q9ULI3	1381 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	SMCHD1	A6NHR9	2005 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	IGKV6D-41	A0A0C4DH26	115 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	IGHV4-61	A0A0C4DH41	118 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	HTR3E	A5X5Y0	456 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	ANKRD61	A6NGH8	418 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	SORBS2	O94875	1100 aa	Known RBP	3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	SIX3	O95343	332 aa	Predicted RBP	3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	IGHV4-59	P01825	116 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	ZFY	P08048	801 aa	Predicted RBP	3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	GNB3	P16520	340 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	ITGA3	P26006	1051 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	CEACAM8	P31997	349 aa	Predicted RBP	3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	NKX2-1	P43699	371 aa	Predicted RBP	3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	GMPS	P49915	693 aa	Predicted RBP	3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	ALDH3A2	P51648	485 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	NAGLU	P54802	743 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	GSDMD	P57764	484 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	PTEN	P60484	403 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	TUBB2A	Q13885	445 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	HERC3	Q15034	1050 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	TAF13	Q15543	124 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	PTGIS	Q16647	500 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	CTU2	Q2VPK5	515 aa	Known RBP	3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	LACTB2	Q53H82	288 aa	Predicted RBP	3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	ZRANB3	Q5FWF4	1079 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	SLC25A53	Q5H9E4	307 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	SUSD4	Q5VX71	490 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	FAM91A1	Q658Y4	838 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	PET117	Q6UWS5	81 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	ENPP7	Q6UWV6	458 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	C11orf57	Q6ZUT1	292 aa	Predicted RBP	3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	ANKRD23	Q86SG2	305 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	APLF	Q8IW19	511 aa	Predicted RBP	3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	EID3	Q8N140	333 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	OR8H3	Q8N146	312 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	RASGEF1A	Q8N9B8	481 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	C9orf43	Q8TAL5	461 aa	Predicted RBP	3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	NSMAF	Q92636	917 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	PROX1	Q92786	737 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	CORO2A	Q92828	525 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	MR1	Q95460	341 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	ST6GALNAC6	Q969X2	333 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	FAM162A	Q96A26	154 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	TMEM143	Q96AN5	459 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	ZNF689	Q96CS4	500 aa	Predicted RBP	3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	CCDC3	Q9BQI4	270 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	FERMT1	Q9BQL6	677 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	THUMPD3	Q9BV44	507 aa	Known RBP	3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	TUBB2B	Q9BVA1	445 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	GTPBP2	Q9BX10	602 aa	Known RBP	3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	PRRG4	Q9BZD6	226 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	OR2B2	Q9GZK3	357 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	MIS12	Q9H081	205 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	SHARPIN	Q9H0F6	387 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	TLE6	Q9H808	572 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	FAM207A	Q9NSI2	230 aa	Predicted RBP	3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	P4HTM	Q9NXG6	502 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	DNAJB9	Q9UBS3	223 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	FHAD1	B1AJZ9	1412 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	SYNJ1	O43426	1573 aa		3.16	□□□□□ -1.9
TMEM50B-208	ENST00000474272	CARMIL1	Q5VZK9	1371 aa		3.15	□□□□□ -1.9
TMEM50B-208	ENST00000474272		A0A087X002	238 aa		3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	TRAV24	A0A0B4J272	114 aa		3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	C2orf81	A6NN90	581 aa		3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	DDHD2	O94830	711 aa		3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	BAG3	O95817	575 aa		3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	CLPTM1	O96005	669 aa		3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	IGLV1-44	P01699	117 aa		3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	RPN1	P04843	607 aa	Known RBP	3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	GPI	P06744	558 aa		3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	DARS	P14868	501 aa	Known RBP	3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	ZNF26	P17031	533 aa	Predicted RBP	3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	CA6	P23280	308 aa		3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	PSMA3	P25788	255 aa		3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	MAP2K2	P36507	400 aa		3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	VAMP7	P51809	220 aa		3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	MAZ	P56270	477 aa	Known RBP	3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	MTCP1	P56278	107 aa		3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	GCNT1	Q02742	428 aa		3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	SQLE	Q14534	574 aa		3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	UGCG	Q16739	394 aa		3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	C1QTNF12	Q5T7M4	302 aa		3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	MOXD1	Q6UVY6	613 aa		3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	TMEM182	Q6ZP80	229 aa	Predicted RBP	3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	SLC16A9	Q7RTY1	509 aa		3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	PIGZ	Q86VD9	579 aa		3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	LGI2	Q8N0V4	545 aa		3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	KLHDC1	Q8N7A1	406 aa		3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	OR4C3	Q8NH37	302 aa		3.15	□□□□□ -1.91
TMEM50B-208	ENST00000474272	GOT1L1	Q8NHS2	421 aa	Predicted RBP	3.15	□□□□□ -1.91

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