RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 VSX2P58304 361 aaPredicted RBP13.19□□□□□ -0.3
USF1-205ENST00000473969 RPS15P62841 145 aaKnown RBP13.19□□□□□ -0.3
USF1-205ENST00000473969 MC1RQ01726 317 aa13.19□□□□□ -0.3
USF1-205ENST00000473969 GRM7Q14831 915 aa13.19□□□□□ -0.3
USF1-205ENST00000473969 FAM214AQ32MH5 1076 aa13.19□□□□□ -0.3
USF1-205ENST00000473969 ARHGAP40Q5TG30 622 aa13.19□□□□□ -0.3
USF1-205ENST00000473969 GSPT2Q8IYD1 628 aaKnown RBP13.19□□□□□ -0.3
USF1-205ENST00000473969 LRRC56Q8IYG6 542 aaPredicted RBP13.19□□□□□ -0.3
USF1-205ENST00000473969 TBC1D19Q8N5T2 526 aa13.19□□□□□ -0.3
USF1-205ENST00000473969 OR56A3Q8NH54 315 aa13.19□□□□□ -0.3
USF1-205ENST00000473969 UBLCP1Q8WVY7 318 aaPredicted RBP13.19□□□□□ -0.3
USF1-205ENST00000473969 KIAA1191Q96A73 305 aa13.19□□□□□ -0.3
USF1-205ENST00000473969 UBXN10Q96LJ8 280 aa13.19□□□□□ -0.3
USF1-205ENST00000473969 LRFN5Q96NI6 719 aa13.19□□□□□ -0.3
USF1-205ENST00000473969 PRAP1Q96NZ9 151 aa13.19□□□□□ -0.3
USF1-205ENST00000473969 NLNQ9BYT8 704 aa13.19□□□□□ -0.3
USF1-205ENST00000473969 VPS11Q9H270 941 aa13.19□□□□□ -0.3
USF1-205ENST00000473969 CNOT10Q9H9A5 744 aaKnown RBP13.19□□□□□ -0.3
USF1-205ENST00000473969 CPNE5Q9HCH3 593 aa13.19□□□□□ -0.3
USF1-205ENST00000473969 SLC6A20Q9NP91 592 aa13.19□□□□□ -0.3
USF1-205ENST00000473969 SNX15Q9NRS6 342 aa13.19□□□□□ -0.3
USF1-205ENST00000473969 CD274Q9NZQ7 290 aa13.19□□□□□ -0.3
USF1-205ENST00000473969 ZNF180Q9UJW8 692 aa13.19□□□□□ -0.3
USF1-205ENST00000473969 A0A096LPK6 155 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 C21orf140B9A014 251 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 K7ENP7 123 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 MEN1O00255 615 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 TXNDC9O14530 226 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 C2P06681 752 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 SNRPAP09012 282 aaKnown RBP13.18□□□□□ -0.3
USF1-205ENST00000473969 SLC35E2BP0CK96 405 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 LIFP15018 202 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 EZRP15311 586 aaKnown RBP13.18□□□□□ -0.3
USF1-205ENST00000473969 TFEBP19484 476 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 GABRA4P48169 554 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 SLC29A2Q14542 456 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 TGFBIQ15582 683 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 PPP1R3AQ16821 1122 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 WASHC2DQ5SRD0 308 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 UBAP2Q5T6F2 1119 aaKnown RBP13.18□□□□□ -0.3
USF1-205ENST00000473969 PRAMEF17Q5VTA0 474 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 YOD1Q5VVQ6 348 aaPredicted RBP13.18□□□□□ -0.3
USF1-205ENST00000473969 INO80CQ6PI98 192 aaPredicted RBP13.18□□□□□ -0.3
USF1-205ENST00000473969 RNF44Q7L0R7 432 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 GPR155Q7Z3F1 870 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 PAQR7Q86WK9 346 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 PYCR2Q96C36 320 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 C17orf62Q9BQA9 187 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 DPH2Q9BQC3 489 aaPredicted RBP13.18□□□□□ -0.3
USF1-205ENST00000473969 SGPP1Q9BX95 441 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 ALG9Q9H6U8 611 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 WWOXQ9NZC7 414 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 NDOR1Q9UHB4 597 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 GPN3Q9UHW5 284 aaPredicted RBP13.18□□□□□ -0.3
USF1-205ENST00000473969 CROTQ9UKG9 612 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 IKZF3Q9UKT9 509 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 LHX6Q9UPM6 363 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 KCNE2Q9Y6J6 123 aa13.18□□□□□ -0.3
USF1-205ENST00000473969 CFAP47Q6ZTR5 3102 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 IQANK1A0A1B0GTG1 560 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 CCDC189A1A4V9 331 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 SYCE1LA8MT33 242 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 ZNF891A8MT65 544 aaPredicted RBP13.17□□□□□ -0.3
USF1-205ENST00000473969 C9J4A7 227 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 EFSO43281 561 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 HCRTR1O43613 425 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 CTSVO60911 334 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 WISP3O95389 354 aaPredicted RBP13.17□□□□□ -0.3
USF1-205ENST00000473969 PIM1P11309 404 aaPredicted RBP13.17□□□□□ -0.3
USF1-205ENST00000473969 NPPBP16860 134 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 CCR8P51685 355 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 RPS15AP62244 130 aaKnown RBP13.17□□□□□ -0.3
USF1-205ENST00000473969 YBX1P67809 324 aaKnown RBP13.17□□□□□ -0.3
USF1-205ENST00000473969 RELAQ04206 551 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 GPS2Q13227 327 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 DNASE1L3Q13609 305 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 PTCHD3Q3KNS1 767 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 CDKL4Q5MAI5 379 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 SULT1C3Q6IMI6 304 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 ZNF425Q6IV72 752 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 FBXO42Q6P3S6 717 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 THOC6Q86W42 341 aaKnown RBP13.17□□□□□ -0.3
USF1-205ENST00000473969 DSELQ8IZU8 1212 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 PROKR1Q8TCW9 393 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 KCTD4Q8WVF5 259 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 EXT2Q93063 718 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 NXNL1Q96CM4 212 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 MTBPQ96DY7 904 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 SLC45A3Q96JT2 553 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 CAPS2Q9BXY5 557 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 GPR87Q9BY21 358 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 ANKZF1Q9H8Y5 726 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 PCMTD2Q9NV79 361 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 CUEDC1Q9NWM3 386 aaPredicted RBP13.17□□□□□ -0.3
USF1-205ENST00000473969 FARSAQ9Y285 508 aaKnown RBP13.17□□□□□ -0.3
USF1-205ENST00000473969 SSUH2Q9Y2M2 353 aa13.17□□□□□ -0.3
USF1-205ENST00000473969 ASPMQ8IZT6 3477 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 IGKV1-8A0A0C4DH67 115 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 SUPT3HB4E1H0 165 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 TRIM49D1C9J1S8 452 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms