RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 SLC28A2O43868 658 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 HSF2BPO75031 334 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 AKAP3O75969 853 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 IGHV4-39P01824 125 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 TPM2P07951 284 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 SBK2P0C263 348 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 FGF5P12034 268 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 ZNF12P17014 697 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 GAP43P17677 238 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 HOXA11P31270 313 aaPredicted RBP3.94□□□□□ -1.78
BRCA1-212ENST00000473961 CSTF2P33240 577 aaKnown RBP eCLIP3.94□□□□□ -1.78
BRCA1-212ENST00000473961 SFTPDP35247 375 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 FMO5P49326 533 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 HERV-K104P61576 105 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 RPL24P83731 157 aaKnown RBP3.94□□□□□ -1.78
BRCA1-212ENST00000473961 SLC34A1Q06495 639 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 LTBQ06643 244 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 ZNF415Q09FC8 603 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 C17orf67Q0P5P2 114 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 TRAP1Q12931 704 aaKnown RBP3.94□□□□□ -1.78
BRCA1-212ENST00000473961 NONOQ15233 471 aaKnown RBP eCLIP3.94□□□□□ -1.78
BRCA1-212ENST00000473961 ACKR1Q16570 336 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 ITPRIPL2Q3MIP1 535 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 ZNF260Q3ZCT1 412 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 TOR1AIP1Q5JTV8 583 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 LYSMD4Q5XG99 296 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 CTR9Q6PD62 1173 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 C9orf47Q6ZRZ4 202 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 TUBA1AQ71U36 451 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 RABEPKQ7Z6M1 372 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 SATL1Q86VE3 508 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 PLD3Q8IV08 490 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 TMEM139Q8IV31 216 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 KLHDC8AQ8IYD2 350 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 PELI3Q8N2H9 469 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 AMER3Q8N944 861 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 CLEC18CQ8NCF0 446 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 SMRP1Q8NCR6 262 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 KIAA0895Q8NCT3 520 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 PHLDA1Q8WV24 401 aaPredicted RBP3.94□□□□□ -1.78
BRCA1-212ENST00000473961 TBC1D31Q96DN5 1066 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 FAM20AQ96MK3 541 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 NAP1L5Q96NT1 182 aaPredicted RBP3.94□□□□□ -1.78
BRCA1-212ENST00000473961 TUBA1CQ9BQE3 449 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 CSTL1Q9H114 145 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 S1PR5Q9H228 398 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 C1orf21Q9H246 121 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 PNNQ9H307 717 aaKnown RBP3.94□□□□□ -1.78
BRCA1-212ENST00000473961 UBQLN3Q9H347 655 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 CUEDC2Q9H467 287 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 UPF2Q9HAU5 1272 aaKnown RBP3.94□□□□□ -1.78
BRCA1-212ENST00000473961 GPR173Q9NS66 373 aa3.94□□□□□ -1.78
BRCA1-212ENST00000473961 TDRKHQ9Y2W6 561 aaKnown RBP3.94□□□□□ -1.78
BRCA1-212ENST00000473961 NACADO15069 1562 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 CTAGE9A4FU28 777 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 SLC9B1P1A6NJY1 282 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 LACTBL1A8MY62 500 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 RTCAO00442 366 aaKnown RBP3.93□□□□□ -1.78
BRCA1-212ENST00000473961 SCO2O43819 266 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 PRAF2O60831 178 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 CTSVO60911 334 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 CAVIN2O95810 425 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 CTAGE8P0CG41 777 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 T-ENOLP0DO92 83 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 CCDC192P0DO97 292 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 CPA3P15088 417 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 CA6P23280 308 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 EPHA2P29317 976 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 SERPINB6P35237 376 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 CDKN2AP42771 156 aaKnown RBP3.93□□□□□ -1.78
BRCA1-212ENST00000473961 OR3A3P47888 321 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 FUT6P51993 359 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 ART1P52961 327 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 MAZP56270 477 aaKnown RBP3.93□□□□□ -1.78
BRCA1-212ENST00000473961 BRWD1-AS2P59051 145 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 TSTA3Q13630 321 aaPredicted RBP3.93□□□□□ -1.78
BRCA1-212ENST00000473961 STXBP2Q15833 593 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 PKN2Q16513 984 aaKnown RBP3.93□□□□□ -1.78
BRCA1-212ENST00000473961 SGCBQ16585 318 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 PDLIM3Q53GG5 364 aaPredicted RBP3.93□□□□□ -1.78
BRCA1-212ENST00000473961 SLC35D3Q5M8T2 416 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 CCNYL2Q5T2Q4 361 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 NHLRC1Q6VVB1 395 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 SPATA2LQ8IUW3 424 aaPredicted RBP3.93□□□□□ -1.78
BRCA1-212ENST00000473961 CROCCP3Q8IVE0 287 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 CTAGE4Q8IX94 777 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 ZNF444Q8N0Y2 327 aaPredicted RBP3.93□□□□□ -1.78
BRCA1-212ENST00000473961 PRSS35Q8N3Z0 413 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 HDDC3Q8N4P3 179 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 ZNF441Q8N8Z8 693 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 OR11H4Q8NGC9 324 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 MED30Q96HR3 178 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 C17orf77Q96MU5 243 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 GDAP1L1Q96MZ0 367 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 RUNDC3BQ96NL0 473 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 TSSK2Q96PF2 358 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 PANX3Q96QZ0 392 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 FAM213AQ9BRX8 229 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 KRTAP4-4Q9BYR3 166 aa3.93□□□□□ -1.78
BRCA1-212ENST00000473961 PITPNM3Q9BZ71 974 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms