RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 STRA8Q7Z7C7 330 aa11.04□□□□□ -0.64
CPNE1-222ENST00000473373 CLEC1AQ8NC01 280 aa11.04□□□□□ -0.64
CPNE1-222ENST00000473373 OR2A1Q8NGT9 310 aa11.04□□□□□ -0.64
CPNE1-222ENST00000473373 ZNF480Q8WV37 535 aa11.04□□□□□ -0.64
CPNE1-222ENST00000473373 ASB11Q8WXH4 323 aa11.04□□□□□ -0.64
CPNE1-222ENST00000473373 TRIM44Q96DX7 344 aaPredicted RBP11.04□□□□□ -0.64
CPNE1-222ENST00000473373 VPS39Q96JC1 886 aa11.04□□□□□ -0.64
CPNE1-222ENST00000473373 CCDC138Q96M89 665 aa11.04□□□□□ -0.64
CPNE1-222ENST00000473373 ERP44Q9BS26 406 aa11.04□□□□□ -0.64
CPNE1-222ENST00000473373 ING2Q9H160 280 aa11.04□□□□□ -0.64
CPNE1-222ENST00000473373 ARL15Q9NXU5 204 aa11.04□□□□□ -0.64
CPNE1-222ENST00000473373 WHRNQ9P202 907 aa11.04□□□□□ -0.64
CPNE1-222ENST00000473373 ANKMY1Q9P2S6 941 aa11.04□□□□□ -0.64
CPNE1-222ENST00000473373 VWA7Q9Y334 891 aa11.04□□□□□ -0.64
CPNE1-222ENST00000473373 TEX264Q9Y6I9 313 aa11.04□□□□□ -0.64
CPNE1-222ENST00000473373 MAU2Q9Y6X3 613 aa11.04□□□□□ -0.64
CPNE1-222ENST00000473373 FAM95CA0A1B0GW59 222 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 A0A1W2PPV9 198 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 HYKKA2RU49 373 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 PRPF4O43172 522 aaKnown RBP eCLIP11.03□□□□□ -0.64
CPNE1-222ENST00000473373 CTSVO60911 334 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 GUCA1CO95843 209 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 CTSBP07858 339 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 NR1D1P20393 614 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 ITGAXP20702 1163 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 GABRA4P48169 554 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 PGDP52209 483 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 PLTPP55058 493 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 CDKN2DP55273 166 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 TBPL1P62380 186 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 ABATP80404 500 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 OCA2Q04671 838 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 ATP1A4Q13733 1029 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 SSPNQ14714 243 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 FASTKD3Q14CZ7 662 aaKnown RBP11.03□□□□□ -0.64
CPNE1-222ENST00000473373 IRAK1BP1Q5VVH5 260 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 CPZQ66K79 652 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 FRMPD2BQ6IN97 320 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 C8orf74Q6P047 294 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 ZNF517Q6ZMY9 492 aaPredicted RBP11.03□□□□□ -0.64
CPNE1-222ENST00000473373 ASB18Q6ZVZ8 466 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 C17orf64Q86WR6 236 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 CNTN4Q8IWV2 1026 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 CTAGE3PQ8IX95 158 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 TMEM102Q8N9M5 508 aaPredicted RBP11.03□□□□□ -0.64
CPNE1-222ENST00000473373 PTERQ96BW5 349 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 VPS50Q96JG6 964 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 FER1L6-AS2Q96M78 137 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 IP6K3Q96PC2 410 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 GBP5Q96PP8 586 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 EGFL8Q99944 293 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 PCBD2Q9H0N5 130 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 ATG10Q9H0Y0 220 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 PARVBQ9HBI1 364 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 SLC6A20Q9NP91 592 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 MAP10Q9P2G4 905 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 CDC23Q9UJX2 597 aa11.03□□□□□ -0.64
CPNE1-222ENST00000473373 UBR5O95071 2799 aaPredicted RBP11.02□□□□□ -0.64
CPNE1-222ENST00000473373 DOCK10Q96BY6 2186 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 LOC105369274A0A096LPK9 316 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 LOC102723532A0A0G2JNH3 316 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 E7ENX8 843 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 H0YGG7 62 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 H7BY64 318 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 GFYI3L273 518 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 TXNDC9O14530 226 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 SLC16A5O15375 505 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 SUV39H1O43463 412 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 PRICKLE3O43900 615 aaPredicted RBP11.02□□□□□ -0.65
CPNE1-222ENST00000473373 IGHEP01854 428 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 ERGP11308 486 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 EZRP15311 586 aaKnown RBP11.02□□□□□ -0.65
CPNE1-222ENST00000473373 FBLP22087 321 aaKnown RBP11.02□□□□□ -0.65
CPNE1-222ENST00000473373 CCND1P24385 295 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 IMPA1P29218 277 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 OR1D4P47884 311 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 ARF3P61204 181 aaPredicted RBP11.02□□□□□ -0.65
CPNE1-222ENST00000473373 CAV1Q03135 178 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 TAP2Q03519 686 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 PRDX1Q06830 199 aaKnown RBP11.02□□□□□ -0.65
CPNE1-222ENST00000473373 KLRB1Q12918 225 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 NAE1Q13564 534 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 RAPSNQ13702 412 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 RBBP7Q16576 425 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 NDUFA9Q16795 377 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 MFSD4BQ5TF39 518 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 STEAP4Q687X5 459 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 CAPN13Q6MZZ7 669 aaPredicted RBP11.02□□□□□ -0.65
CPNE1-222ENST00000473373 AGTRAPQ6RW13 159 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 MBOAT1Q6ZNC8 495 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 SHISA6Q6ZSJ9 500 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 MED25Q71SY5 747 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 RNF44Q7L0R7 432 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 GALNT7Q86SF2 657 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 SPNS2Q8IVW8 549 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 APLFQ8IW19 511 aaPredicted RBP11.02□□□□□ -0.65
CPNE1-222ENST00000473373 PRSS58Q8IYP2 241 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 OR4N4Q8N0Y3 316 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 TBC1D19Q8N5T2 526 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 CSNK1A1LQ8N752 337 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms