RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 RPIAP49247 311 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 STK19P49842 368 aaPredicted RBP20.49■□□□□ 0.87
COL18A1-207ENST00000473212 HSPA14Q0VDF9 509 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 SLC22A16Q86VW1 577 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 HORMAD1Q86X24 394 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 CCDC71Q8IV32 467 aaPredicted RBP20.49■□□□□ 0.87
COL18A1-207ENST00000473212 SVOPQ8N4V2 548 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 AUTS2Q8WXX7 1259 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 TBC1D20Q96BZ9 403 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 SCLYQ96I15 445 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 PRDM8Q9NQV8 689 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 STARD7Q9NQZ5 370 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 THG1LQ9NWX6 298 aaKnown RBP20.49■□□□□ 0.87
COL18A1-207ENST00000473212 KIF17Q9P2E2 1029 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 ERVW-1Q9UQF0 538 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 SCN5AQ14524 2016 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 TRBV5-4A0A0C4DH59 114 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 ZNF821O75541 412 aaPredicted RBP20.49■□□□□ 0.87
COL18A1-207ENST00000473212 FABP3P05413 133 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 CD36P16671 472 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 ITPKAP23677 461 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 GRK3P35626 688 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 TUFMP49411 452 aaKnown RBP20.49■□□□□ 0.87
COL18A1-207ENST00000473212 BCL2L1Q07817 233 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 DGKKQ5KSL6 1271 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 NEK5Q6P3R8 708 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 AHSA2Q719I0 299 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 PLD3Q8IV08 490 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 NXPE1Q8N323 547 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 ATG16L2Q8NAA4 619 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 POP5Q969H6 163 aaKnown RBP20.49■□□□□ 0.87
COL18A1-207ENST00000473212 ELOVL6Q9H5J4 265 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 KRT84Q9NSB2 600 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 SAMHD1Q9Y3Z3 626 aaKnown RBP20.49■□□□□ 0.87
COL18A1-207ENST00000473212 HTR3EA5X5Y0 456 aa20.48■□□□□ 0.87
COL18A1-207ENST00000473212 EVPLLA8MZ36 301 aa20.48■□□□□ 0.87
COL18A1-207ENST00000473212 GREM1O60565 184 aa20.48■□□□□ 0.87
COL18A1-207ENST00000473212 PRPS2P11908 318 aa20.48■□□□□ 0.87
COL18A1-207ENST00000473212 FPR1P21462 350 aa20.48■□□□□ 0.87
COL18A1-207ENST00000473212 CTSOP43234 321 aaPredicted RBP20.48■□□□□ 0.87
COL18A1-207ENST00000473212 ATP13A5Q4VNC0 1218 aa20.48■□□□□ 0.87
COL18A1-207ENST00000473212 TPGS1Q6ZTW0 290 aa20.48■□□□□ 0.87
COL18A1-207ENST00000473212 VOPP1Q96AW1 172 aa20.48■□□□□ 0.87
COL18A1-207ENST00000473212 RDH14Q9HBH5 336 aa20.48■□□□□ 0.87
COL18A1-207ENST00000473212 CD84Q9UIB8 345 aa20.48■□□□□ 0.87
COL18A1-207ENST00000473212 FAM32AQ9Y421 112 aaKnown RBP20.48■□□□□ 0.87
COL18A1-207ENST00000473212 YIPF1Q9Y548 306 aa20.48■□□□□ 0.87
COL18A1-207ENST00000473212 ANXA5P08758 320 aa20.48■□□□□ 0.87
COL18A1-207ENST00000473212 PSMA8Q8TAA3 256 aa20.48■□□□□ 0.87
COL18A1-207ENST00000473212 C2orf15Q8WU43 125 aaKnown RBP20.48■□□□□ 0.87
COL18A1-207ENST00000473212 TESCQ96BS2 214 aa20.48■□□□□ 0.87
COL18A1-207ENST00000473212 KLHL25Q9H0H3 589 aa20.48■□□□□ 0.87
COL18A1-207ENST00000473212 SLC32A1Q9H598 525 aa20.48■□□□□ 0.87
COL18A1-207ENST00000473212 ZNF334Q9HCZ1 680 aaPredicted RBP20.48■□□□□ 0.87
COL18A1-207ENST00000473212 FKBP9O95302 570 aa20.47■□□□□ 0.87
COL18A1-207ENST00000473212 SELPP16109 830 aa20.47■□□□□ 0.87
COL18A1-207ENST00000473212 TGFBR2P37173 567 aa20.47■□□□□ 0.87
COL18A1-207ENST00000473212 CREMQ03060 361 aa20.47■□□□□ 0.87
COL18A1-207ENST00000473212 SMARCB1Q12824 385 aa20.47■□□□□ 0.87
COL18A1-207ENST00000473212 TTLL9Q3SXZ7 439 aa20.47■□□□□ 0.87
COL18A1-207ENST00000473212 KIAA1614Q5VZ46 1190 aa20.47■□□□□ 0.87
COL18A1-207ENST00000473212 SERPINA13PQ6UXR4 307 aa20.47■□□□□ 0.87
COL18A1-207ENST00000473212 MACC1Q6ZN28 852 aa20.47■□□□□ 0.87
COL18A1-207ENST00000473212 PRSS48Q7RTY5 328 aa20.47■□□□□ 0.87
COL18A1-207ENST00000473212 TMCO2Q7Z6W1 182 aaPredicted RBP20.47■□□□□ 0.87
COL18A1-207ENST00000473212 SERPINA11Q86U17 422 aa20.47■□□□□ 0.87
COL18A1-207ENST00000473212 TSPYL5Q86VY4 417 aaPredicted RBP20.47■□□□□ 0.87
COL18A1-207ENST00000473212 NPAS4Q8IUM7 802 aa20.47■□□□□ 0.87
COL18A1-207ENST00000473212 CDC26Q8NHZ8 85 aa20.47■□□□□ 0.87
COL18A1-207ENST00000473212 ZHX1-C8orf76Q96EF9 292 aa20.47■□□□□ 0.87
COL18A1-207ENST00000473212 ATG10Q9H0Y0 220 aa20.47■□□□□ 0.87
COL18A1-207ENST00000473212 DSN1Q9H410 356 aa20.47■□□□□ 0.87
COL18A1-207ENST00000473212 SIRT5Q9NXA8 310 aa20.47■□□□□ 0.87
COL18A1-207ENST00000473212 SCHIP1Q9P0W5 487 aaPredicted RBP20.47■□□□□ 0.87
COL18A1-207ENST00000473212 OR2A25A4D2G3 310 aa20.47■□□□□ 0.87
COL18A1-207ENST00000473212 EFCAB9A8MZ26 197 aa20.47■□□□□ 0.87
COL18A1-207ENST00000473212 CLIC1O00299 241 aa20.47■□□□□ 0.87
COL18A1-207ENST00000473212 NRG2O14511 850 aaPredicted RBP20.47■□□□□ 0.87
COL18A1-207ENST00000473212 ENGP17813 658 aa20.47■□□□□ 0.87
COL18A1-207ENST00000473212 HOXD12P35452 270 aa20.47■□□□□ 0.87
COL18A1-207ENST00000473212 KIAA1841Q6NSI8 718 aa20.47■□□□□ 0.87
COL18A1-207ENST00000473212 FOXJ1Q92949 421 aa20.47■□□□□ 0.87
COL18A1-207ENST00000473212 HSH2DQ96JZ2 352 aa20.47■□□□□ 0.87
COL18A1-207ENST00000473212 DACH2Q96NX9 599 aa20.47■□□□□ 0.87
COL18A1-207ENST00000473212 SLC22A14Q9Y267 594 aa20.47■□□□□ 0.87
COL18A1-207ENST00000473212 GPC6Q9Y625 555 aaPredicted RBP20.47■□□□□ 0.87
COL18A1-207ENST00000473212 DOCK6Q96HP0 2047 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 YY2O15391 372 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 PCDHGA12O60330 932 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 WBP4O75554 376 aaKnown RBP20.46■□□□□ 0.87
COL18A1-207ENST00000473212 KCNK5O95279 499 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 CD40LGP29965 261 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 KDELR2P33947 212 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 GSSP48637 474 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 AP1S1P61966 158 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 RPP38P78345 283 aaKnown RBP20.46■□□□□ 0.87
COL18A1-207ENST00000473212 MVKQ03426 396 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 ELAVL2Q12926 359 aaKnown RBP20.46■□□□□ 0.87
COL18A1-207ENST00000473212 SYT16Q17RD7 645 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 VMACQ2NL98 169 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms