RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 DNPEPQ9ULA0 475 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 KLHL20Q9Y2M5 609 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 COQ4Q9Y3A0 265 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 ATP6AP2A0A1C7CYW4 349 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 FAM170AA1A519 330 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 RBMY1BA6NDE4 496 aaKnown RBP6.1□□□□□ -1.43
HDAC3-206ENST00000471968 RBMY1EA6NEQ0 496 aaKnown RBP6.1□□□□□ -1.43
HDAC3-206ENST00000471968 ARHGAP42A6NI28 874 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 FOXN3O00409 490 aaPredicted RBP6.1□□□□□ -1.43
HDAC3-206ENST00000471968 SUSD5O60279 629 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 ATP6AP2O75787 350 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 EPPINO95925 133 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 RBMY1DP0C7P1 496 aaKnown RBP6.1□□□□□ -1.43
HDAC3-206ENST00000471968 ENDOUP21128 410 aaKnown RBP6.1□□□□□ -1.43
HDAC3-206ENST00000471968 USF1P22415 310 aaPredicted RBP6.1□□□□□ -1.43
HDAC3-206ENST00000471968 GNA15P30679 374 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 FMO4P31512 558 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 SF3B4Q15427 424 aaKnown RBP eCLIP6.1□□□□□ -1.434e-12■■■■■ 57.7
HDAC3-206ENST00000471968 EXT1Q16394 746 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 ANKRD20A8PQ5CZ79 823 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 PRMT9Q6P2P2 845 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 CNNM4Q6P4Q7 775 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 PLXDC2Q6UX71 529 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 RGS9BPQ6ZS82 235 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 LACC1Q8IV20 430 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 PGBD5Q8N414 524 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 CCDC185Q8N715 623 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 BEND7Q8N7W2 519 aaPredicted RBP6.1□□□□□ -1.43
HDAC3-206ENST00000471968 GPR26Q8NDV2 337 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 GDAP1Q8TB36 358 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 M1APQ8TC57 530 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 MRAPQ8TCY5 172 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 CCHCR1Q8TD31 782 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 ZNF418Q8TF45 676 aaPredicted RBP6.1□□□□□ -1.43
HDAC3-206ENST00000471968 C18orf8Q96DM3 657 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 HSPBAP1Q96EW2 488 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 KREMEN1Q96MU8 473 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 BTBD9Q96Q07 612 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 TUBGCP2Q9BSJ2 902 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 ZSCAN5AQ9BUG6 496 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 TTTY12Q9BZ98 90 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 MMP27Q9H306 513 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 METTL17Q9H7H0 456 aaPredicted RBP6.1□□□□□ -1.43
HDAC3-206ENST00000471968 UNKLQ9H9P5 680 aaKnown RBP6.1□□□□□ -1.43
HDAC3-206ENST00000471968 MMP25Q9NPA2 562 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 SPHK1Q9NYA1 384 aa6.1□□□□□ -1.43
HDAC3-206ENST00000471968 MAGED1Q9Y5V3 778 aaPredicted RBP6.1□□□□□ -1.43
HDAC3-206ENST00000471968 CSMD3Q7Z407 3707 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.09□□□□□ -1.43
HDAC3-206ENST00000471968 RGSL1A5PLK6 1076 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 MBD3L3A6NE82 208 aaPredicted RBP6.09□□□□□ -1.43
HDAC3-206ENST00000471968 ELOA3DA6NLF2 546 aaPredicted RBP6.09□□□□□ -1.43
HDAC3-206ENST00000471968 OR2AG2A6NM03 316 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 DFFAO00273 331 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 CDC7O00311 574 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 CDK2AP1O14519 115 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 FZD6O60353 706 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 THBS1P07996 1170 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 SLC25A16P16260 332 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 TRHRP34981 398 aaPredicted RBP6.09□□□□□ -1.43
HDAC3-206ENST00000471968 GRIA3P42263 894 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 PTPN9P43378 593 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 LIMS1P48059 325 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 NUDT6P53370 316 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 SNX16P57768 344 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 FAM27E3Q08E93 113 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 FAPQ12884 760 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 PRKG2Q13237 762 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 ELOA3BQ3SY89 546 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 TCTE1Q5JU00 501 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 ZNF550Q7Z398 422 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 ZDHHC17Q8IUH5 632 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 CYP4Z2PQ8N1L4 340 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 FAM109AQ8N4B1 249 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 KIF2BQ8N4N8 673 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 TRAM1L1Q8N609 369 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 TMEM251Q8N6I4 163 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 ELOA3Q8NG57 546 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 MBD3L2Q8NHZ7 208 aaPredicted RBP6.09□□□□□ -1.43
HDAC3-206ENST00000471968 ASB11Q8WXH4 323 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 AKAP1Q92667 903 aaKnown RBP eCLIP6.09□□□□□ -1.43
HDAC3-206ENST00000471968 DHX58Q96C10 678 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 FAF2Q96CS3 445 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 SELENOSQ9BQE4 189 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 ANP32EQ9BTT0 268 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 TFB2MQ9H5Q4 396 aaKnown RBP6.09□□□□□ -1.43
HDAC3-206ENST00000471968 GAR1Q9NY12 217 aaKnown RBP6.09□□□□□ -1.43
HDAC3-206ENST00000471968 PCDHB10Q9UN67 800 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 PCDHA7Q9UN72 937 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 TRAF3IP3Q9Y228 551 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 PCDHA3Q9Y5H8 950 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 HEBP2Q9Y5Z4 205 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 DUSP10Q9Y6W6 482 aa6.09□□□□□ -1.43
HDAC3-206ENST00000471968 STAB2Q8WWQ8 2551 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 TRGV5A0A0B4J1U4 118 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 A0A0G2JMM0 328 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 A0A1W2PPB8 328 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 A0A1W2PRS3 328 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 FITM1A5D6W6 292 aa6.08□□□□□ -1.44
HDAC3-206ENST00000471968 KIR3DP1A8MWS1 328 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms