RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 ERI3O43414 337 aaKnown RBP12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 HRGP04196 525 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 EDNRAP25101 427 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 RPS24P62847 133 aaKnown RBP12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 AUHQ13825 339 aaKnown RBP12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 DUSP28Q4G0W2 176 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 LCN1P1Q5VSP4 162 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 TMEM17Q86X19 198 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 HAS1Q92839 578 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 SHDQ96IW2 340 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 GBA3Q9H227 469 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 CCNB1IP1Q9NPC3 277 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 KCNN3Q9UGI6 736 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 IRS2Q9Y4H2 1338 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 SMIM30A4D0T7 59 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 NARSO43776 548 aaKnown RBP12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 MAGEA6P43360 314 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 NR1H2P55055 460 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ADGRE1Q14246 886 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 TNFAIP8L3Q5GJ75 292 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 CARD17Q5XLA6 110 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 TNS2Q63HR2 1409 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 GLOD5A6NK44 160 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 A6NLC8 198 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 UNC5CO95185 931 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 MRPL49Q13405 166 aaKnown RBP12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ARL13AQ5H913 290 aaPredicted RBP12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 GRASPQ7Z6J2 395 aaPredicted RBP12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 S100PBPQ96BU1 408 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 NECAB3Q96P71 396 aaPredicted RBP12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 IL4I1Q96RQ9 567 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ZCCHC3Q9NUD5 404 aaKnown RBP12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 STOX2Q9P2F5 926 aaPredicted RBP12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 SNX3O60493 162 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 LMO2P25791 158 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 GBX2P52951 348 aaPredicted RBP12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 USP51Q70EK9 711 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 CYP2U1Q7Z449 544 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 RAB43Q86YS6 212 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ZDHHC21Q8IVQ6 265 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 CNTD1Q8N815 330 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 LNX1Q8TBB1 728 aaPredicted RBP12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 TBC1D15Q8TC07 691 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ZNF649Q9BS31 505 aa12.94□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ATRXP46100 2492 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 A0A1W2PPL8 197 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 CAPN8A6NHC0 703 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 NRIP1P48552 1158 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 NAA20P61599 178 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 KHDC1LQ5JSQ8 128 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 UFD1Q92890 307 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 WDR12Q9GZL7 423 aaKnown RBP12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ATXN7L1Q9ULK2 861 aaPredicted RBP12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 HOXB2P14652 356 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 NSG1P42857 185 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 GJD3Q8N144 294 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 KCNC2Q96PR1 638 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ZNF69Q9UC07 566 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ALPIP09923 528 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 TMEM214Q6NUQ4 689 aaKnown RBP12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 HM13Q8TCT9 377 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 SLC7A6OSQ96CW6 309 aaPredicted RBP12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 FAM210AQ96ND0 272 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 COL21A1Q96P44 957 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 LRRC4CQ9HCJ2 640 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 CDC14AQ9UNH5 594 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 CFL2Q9Y281 166 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 CIB4A0PJX0 185 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 WNT9AO14904 365 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 PI15O43692 258 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ITGB5P18084 799 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 GHRHRQ02643 423 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 SRYQ05066 204 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 STRADAQ7RTN6 431 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 OR2T34Q8NGX1 318 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 OR2T3Q8NH03 318 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 FRS2Q8WU20 508 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 PLEKHA3Q9HB20 300 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 TRPV4Q9HBA0 871 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ENAMQ9NRM1 1142 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 GKN1Q9NS71 199 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ZNF12P17014 697 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 KHKP50053 298 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 MLLT1Q03111 559 aaPredicted RBP12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 LPAL2Q16609 132 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 FAM182AQ5T1J6 154 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ZNF221Q9UK13 617 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ALG5Q9Y673 324 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 OR6C6A6NF89 314 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 C11orf98E9PRG8 122 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 SOX1O00570 391 aaPredicted RBP12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 AIREO43918 545 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 CD48P09326 243 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ADH5P11766 374 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 SNTA1Q13424 505 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 FASTKD3Q14CZ7 662 aaKnown RBP12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ZACNQ401N2 412 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 CERS6Q6ZMG9 384 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 PRELID2Q8N945 189 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 PCBD2Q9H0N5 130 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms