RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 HSF2Q03933 536 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 PPP1R8Q12972 351 aaKnown RBP8.78□□□□□ -1
SMARCE1-207ENST00000469334 CAMK2GQ13555 558 aaPredicted RBP8.78□□□□□ -1
SMARCE1-207ENST00000469334 POU4F3Q15319 338 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 STXBP2Q15833 593 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 GRIK4Q16099 956 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 WSCD2Q2TBF2 565 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 SLC25A52Q3SY17 297 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 SUPT20HL1Q3ZLR7 823 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 KLHL17Q6TDP4 642 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 ABHD15Q6UXT9 468 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 LIPIQ6XZB0 460 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 HSDL2Q6YN16 418 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 SCUBE3Q8IX30 993 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 OR10A6Q8NH74 314 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 ANKRD49Q8WVL7 239 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 CREB3L1Q96BA8 519 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 TSGA13Q96PP4 275 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 TAAR1Q96RJ0 339 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 KCNA7Q96RP8 456 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 DPYSL5Q9BPU6 564 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 QTRT2Q9H974 415 aaKnown RBP8.78□□□□□ -1
SMARCE1-207ENST00000469334 SEC14L4Q9UDX3 406 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 ADAM30Q9UKF2 790 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 VPS9D1Q9Y2B5 631 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 PCDHGB7Q9Y5F8 929 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 PCDHGA6Q9Y5G7 932 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 FABP12A6NFH5 140 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 ZNF670-ZNF695F2Z2N8 137 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 SLC30A4O14863 429 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 GMDSO60547 372 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 RPS6KA4O75676 772 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 OR4F21O95013 312 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 MLYCDO95822 493 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 FAM157BP0CG42 384 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 CD1DP15813 335 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 HK1P19367 917 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 CD9P21926 228 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 AKT1P31749 480 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 GPC1P35052 558 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 MATKP42679 507 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 RPL34P49207 117 aaKnown RBP8.78□□□□□ -1
SMARCE1-207ENST00000469334 EXOSC2Q13868 293 aaKnown RBP8.78□□□□□ -1
SMARCE1-207ENST00000469334 TSTQ16762 297 aaKnown RBP8.78□□□□□ -1
SMARCE1-207ENST00000469334 CRY2Q49AN0 593 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 CARD16Q5EG05 197 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 C6orf136Q5SQH8 315 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 GPR158Q5T848 1215 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 TRIQKQ629K1 86 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 OR4F3Q6IEY1 312 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 METAP1DQ6UB28 335 aaPredicted RBP8.78□□□□□ -1
SMARCE1-207ENST00000469334 BRINP3Q76B58 766 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 CEP68Q76N32 757 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 CALHM3Q86XJ0 350 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 ZBTB8OSQ8IWT0 167 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 ZZZ3Q8IYH5 903 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 LRRC17Q8N6Y2 441 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 CLDN22Q8N7P3 220 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 C12orf29Q8N999 325 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 SLC37A3Q8NCC5 494 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 C19orf18Q8NEA5 215 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 DENND6BQ8NEG7 585 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 COPS5Q92905 334 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 NECTIN4Q96NY8 510 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 ZBTB18Q99592 522 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 MGLLQ99685 303 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 P2RY13Q9BPV8 354 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 WACQ9BTA9 647 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 THUMPD3Q9BV44 507 aaKnown RBP8.78□□□□□ -1
SMARCE1-207ENST00000469334 C1QTNF3Q9BXJ4 246 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 BARHL1Q9BZE3 327 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 TFB2MQ9H5Q4 396 aaKnown RBP8.78□□□□□ -1
SMARCE1-207ENST00000469334 RPF1Q9H9Y2 349 aaKnown RBP8.78□□□□□ -1
SMARCE1-207ENST00000469334 TMLHEQ9NVH6 421 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 C1orf109Q9NX04 203 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 CNOT2Q9NZN8 540 aaKnown RBP8.78□□□□□ -1
SMARCE1-207ENST00000469334 PDP1Q9P0J1 537 aaPredicted RBP8.78□□□□□ -1
SMARCE1-207ENST00000469334 COPS3Q9UNS2 423 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 BAIAP2Q9UQB8 552 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 KPNA5O15131 536 aa8.77□□□□□ -1.01
SMARCE1-207ENST00000469334 RHOBTB1O94844 696 aa8.77□□□□□ -1.01
SMARCE1-207ENST00000469334 TSPAN19P0C672 248 aa8.77□□□□□ -1.01
SMARCE1-207ENST00000469334 ITGB7P26010 798 aa8.77□□□□□ -1.01
SMARCE1-207ENST00000469334 RPS19P39019 145 aaKnown RBP8.77□□□□□ -1.01
SMARCE1-207ENST00000469334 RECQLP46063 649 aaPredicted RBP8.77□□□□□ -1.01
SMARCE1-207ENST00000469334 HAAOP46952 286 aa8.77□□□□□ -1.01
SMARCE1-207ENST00000469334 SULT1E1P49888 294 aa8.77□□□□□ -1.01
SMARCE1-207ENST00000469334 GEMP55040 296 aa8.77□□□□□ -1.01
SMARCE1-207ENST00000469334 YWHAHQ04917 246 aaPredicted RBP8.77□□□□□ -1.01
SMARCE1-207ENST00000469334 SF3A2Q15428 464 aaKnown RBP8.77□□□□□ -1.01
SMARCE1-207ENST00000469334 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.77□□□□□ -1.013e-7■■□□□ 12.7
SMARCE1-207ENST00000469334 PYDC2Q56P42 97 aa8.77□□□□□ -1.01
SMARCE1-207ENST00000469334 DDI2Q5TDH0 399 aa8.77□□□□□ -1.01
SMARCE1-207ENST00000469334 ANKS6Q68DC2 871 aa8.77□□□□□ -1.01
SMARCE1-207ENST00000469334 ARHGAP17Q68EM7 881 aa8.77□□□□□ -1.01
SMARCE1-207ENST00000469334 EIF3MQ7L2H7 374 aaKnown RBP8.77□□□□□ -1.01
SMARCE1-207ENST00000469334 KDELC2Q7Z4H8 507 aa8.77□□□□□ -1.01
SMARCE1-207ENST00000469334 ZNF605Q86T29 641 aa8.77□□□□□ -1.01
SMARCE1-207ENST00000469334 ASPGQ86U10 573 aa8.77□□□□□ -1.01
SMARCE1-207ENST00000469334 FAM83AQ86UY5 434 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms