RNA–Protein interactions for RNA: ENST00000468619.5

SHANK2-214, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 2

Gene SHANK2, Length 2,775 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-214ENST00000468619 KLHDC9Q8NEP7 349 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 OR8H1Q8NGG4 311 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 NTAN1Q96AB6 310 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 TSGA13Q96PP4 275 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 KCNC2Q96PR1 638 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 FAM83DQ9H4H8 585 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 PSORS1C1Q9UIG5 152 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 DNMT3AQ9Y6K1 912 aaPredicted RBP13.03□□□□□ -0.32
SHANK2-214ENST00000468619 FRMPD3Q5JV73 1810 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 CIB4A0PJX0 185 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 H3BM21 787 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 PLD2O14939 933 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 PER2O15055 1255 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 SLC7A4O43246 635 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 TNFRSF21O75509 655 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 RETP07949 1114 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 HOXC8P31273 242 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 ZNF648Q5T619 568 aaPredicted RBP13.03□□□□□ -0.32
SHANK2-214ENST00000468619 LAMTOR1Q6IAA8 161 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 GALNT7Q86SF2 657 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 FAM217AQ8IXS0 508 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 VWA5B2Q8N398 1253 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 STAG3L4Q8TBR4 150 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 PXYLP1Q8TE99 480 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 MYDGFQ969H8 173 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 SH3KBP1Q96B97 665 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 TBATAQ96M53 351 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 SLC2A13Q96QE2 648 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 COLEC11Q9BWP8 271 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 NUSAP1Q9BXS6 441 aaKnown RBP13.03□□□□□ -0.32
SHANK2-214ENST00000468619 ULBP1Q9BZM6 244 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 MAGIXQ9H6Y5 334 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 RNF121Q9H920 327 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 ZNF490Q9ULM2 529 aaPredicted RBP13.03□□□□□ -0.32
SHANK2-214ENST00000468619 SAMHD1Q9Y3Z3 626 aaKnown RBP13.03□□□□□ -0.32
SHANK2-214ENST00000468619 PCDHGA6Q9Y5G7 932 aa13.03□□□□□ -0.32
SHANK2-214ENST00000468619 UBA6A0AVT1 1052 aaPredicted RBP13.02□□□□□ -0.32
SHANK2-214ENST00000468619 CDK1P06493 297 aa13.02□□□□□ -0.32
SHANK2-214ENST00000468619 RPS17P08708 135 aaKnown RBP13.02□□□□□ -0.32
SHANK2-214ENST00000468619 PRSS56P0CW18 603 aa13.02□□□□□ -0.32
SHANK2-214ENST00000468619 ICAM2P13598 275 aa13.02□□□□□ -0.32
SHANK2-214ENST00000468619 DARSP14868 501 aaKnown RBP13.02□□□□□ -0.32
SHANK2-214ENST00000468619 IL32P24001 234 aa13.02□□□□□ -0.32
SHANK2-214ENST00000468619 MAP3K7CLP57077 242 aa13.02□□□□□ -0.32
SHANK2-214ENST00000468619 MAXP61244 160 aa13.02□□□□□ -0.32
SHANK2-214ENST00000468619 SCN1BQ07699 218 aa13.02□□□□□ -0.32
SHANK2-214ENST00000468619 ITKQ08881 620 aa13.02□□□□□ -0.32
SHANK2-214ENST00000468619 MED22Q15528 200 aa13.02□□□□□ -0.32
SHANK2-214ENST00000468619 AP5B1Q2VPB7 878 aa13.02□□□□□ -0.32
SHANK2-214ENST00000468619 CACHD1Q5VU97 1274 aa13.02□□□□□ -0.32
SHANK2-214ENST00000468619 PAQR3Q6TCH7 311 aa13.02□□□□□ -0.32
SHANK2-214ENST00000468619 GPRIN3Q6ZVF9 776 aa13.02□□□□□ -0.32
SHANK2-214ENST00000468619 MILR1Q7Z6M3 343 aa13.02□□□□□ -0.32
SHANK2-214ENST00000468619 KLHDC8BQ8IXV7 354 aa13.02□□□□□ -0.32
SHANK2-214ENST00000468619 STX19Q8N4C7 294 aa13.02□□□□□ -0.32
SHANK2-214ENST00000468619 VANGL1Q8TAA9 524 aaPredicted RBP13.02□□□□□ -0.32
SHANK2-214ENST00000468619 RHEBL1Q8TAI7 183 aa13.02□□□□□ -0.32
SHANK2-214ENST00000468619 RNF34Q969K3 372 aa13.02□□□□□ -0.32
SHANK2-214ENST00000468619 FAM120BQ96EK7 910 aaKnown RBP13.02□□□□□ -0.32
SHANK2-214ENST00000468619 MSANTD3Q96H12 275 aa13.02□□□□□ -0.32
SHANK2-214ENST00000468619 SLC9A7Q96T83 725 aa13.02□□□□□ -0.32
SHANK2-214ENST00000468619 CNPPD1Q9BV87 410 aa13.02□□□□□ -0.32
SHANK2-214ENST00000468619 TTLL2Q9BWV7 592 aa13.02□□□□□ -0.32
SHANK2-214ENST00000468619 ASAH2Q9NR71 780 aa13.02□□□□□ -0.32
SHANK2-214ENST00000468619 EVA1BQ9NVM1 165 aa13.02□□□□□ -0.32
SHANK2-214ENST00000468619 EIF3KQ9UBQ5 218 aaKnown RBP13.02□□□□□ -0.32
SHANK2-214ENST00000468619 TRMT6Q9UJA5 497 aaKnown RBP13.02□□□□□ -0.32
SHANK2-214ENST00000468619 GRXCR2A6NFK2 248 aa13.02□□□□□ -0.33
SHANK2-214ENST00000468619 MUSKO15146 869 aa13.02□□□□□ -0.33
SHANK2-214ENST00000468619 STX7O15400 261 aaKnown RBP13.02□□□□□ -0.33
SHANK2-214ENST00000468619 GNRH1P01148 92 aa13.02□□□□□ -0.33
SHANK2-214ENST00000468619 CNPP09543 421 aaKnown RBP13.02□□□□□ -0.33
SHANK2-214ENST00000468619 CTSHP09668 335 aa13.02□□□□□ -0.33
SHANK2-214ENST00000468619 CCNCP24863 283 aa13.02□□□□□ -0.33
SHANK2-214ENST00000468619 GRK4P32298 578 aa13.02□□□□□ -0.33
SHANK2-214ENST00000468619 KIR2DL3P43628 341 aa13.02□□□□□ -0.33
SHANK2-214ENST00000468619 SOX9P48436 509 aa13.02□□□□□ -0.33
SHANK2-214ENST00000468619 NRIP1P48552 1158 aa13.02□□□□□ -0.33
SHANK2-214ENST00000468619 LIMK1P53667 647 aa13.02□□□□□ -0.33
SHANK2-214ENST00000468619 SCAPQ12770 1279 aa13.02□□□□□ -0.33
SHANK2-214ENST00000468619 SMARCB1Q12824 385 aa13.02□□□□□ -0.33
SHANK2-214ENST00000468619 TNK1Q13470 666 aa13.02□□□□□ -0.33
SHANK2-214ENST00000468619 CAMK2GQ13555 558 aaPredicted RBP13.02□□□□□ -0.33
SHANK2-214ENST00000468619 TSTQ16762 297 aaKnown RBP13.02□□□□□ -0.33
SHANK2-214ENST00000468619 SPANXN4Q5MJ08 99 aa13.02□□□□□ -0.33
SHANK2-214ENST00000468619 FAM122CQ6P4D5 195 aa13.02□□□□□ -0.33
SHANK2-214ENST00000468619 CREB3L2Q70SY1 520 aa13.02□□□□□ -0.33
SHANK2-214ENST00000468619 CCDC117Q8IWD4 279 aaPredicted RBP13.02□□□□□ -0.33
SHANK2-214ENST00000468619 TCTE3Q8IZS6 198 aa13.02□□□□□ -0.33
SHANK2-214ENST00000468619 CRYBG2Q8N1P7 616 aa13.02□□□□□ -0.33
SHANK2-214ENST00000468619 NLGN4YQ8NFZ3 816 aaPredicted RBP13.02□□□□□ -0.33
SHANK2-214ENST00000468619 OR5M11Q96RB7 305 aa13.02□□□□□ -0.33
SHANK2-214ENST00000468619 SRRQ9GZT4 340 aa13.02□□□□□ -0.33
SHANK2-214ENST00000468619 TFB2MQ9H5Q4 396 aaKnown RBP13.02□□□□□ -0.33
SHANK2-214ENST00000468619 FAM124BQ9H5Z6 455 aaPredicted RBP13.02□□□□□ -0.33
SHANK2-214ENST00000468619 RAD18Q9NS91 495 aa13.02□□□□□ -0.33
SHANK2-214ENST00000468619 NDFIP2Q9NV92 336 aa13.02□□□□□ -0.33
SHANK2-214ENST00000468619 SAGE1Q9NXZ1 904 aa13.02□□□□□ -0.33
SHANK2-214ENST00000468619 EIF2B4Q9UI10 523 aaKnown RBP13.02□□□□□ -0.33
SHANK2-214ENST00000468619 PCTPQ9UKL6 214 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms