RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 TRIP13Q15645 432 aaPredicted RBP20.08■□□□□ 0.81
COL9A3-207ENST00000467819 TPSAB1Q15661 275 aa20.08■□□□□ 0.81
COL9A3-207ENST00000467819 ANKRD20A4Q4UJ75 823 aa20.08■□□□□ 0.81
COL9A3-207ENST00000467819 VWA2Q5GFL6 755 aa20.08■□□□□ 0.81
COL9A3-207ENST00000467819 ISLR2Q6UXK2 745 aa20.08■□□□□ 0.81
COL9A3-207ENST00000467819 COG1Q8WTW3 980 aa20.08■□□□□ 0.81
COL9A3-207ENST00000467819 MAIP1Q8WWC4 291 aa20.08■□□□□ 0.81
COL9A3-207ENST00000467819 YIPF2Q9BWQ6 316 aa20.08■□□□□ 0.81
COL9A3-207ENST00000467819 MRPS30Q9NP92 439 aaKnown RBP20.08■□□□□ 0.81
COL9A3-207ENST00000467819 LZTFL1Q9NQ48 299 aa20.08■□□□□ 0.81
COL9A3-207ENST00000467819 ZKSCAN5Q9Y2L8 839 aa20.08■□□□□ 0.81
COL9A3-207ENST00000467819 CPAMD8Q8IZJ3 1885 aa20.07■□□□□ 0.8
COL9A3-207ENST00000467819 E5RI56 91 aa20.07■□□□□ 0.8
COL9A3-207ENST00000467819 E2F3O00716 465 aa20.07■□□□□ 0.8
COL9A3-207ENST00000467819 KLHL18O94889 574 aa20.07■□□□□ 0.8
COL9A3-207ENST00000467819 ERGP11308 486 aa20.07■□□□□ 0.8
COL9A3-207ENST00000467819 DCTP40126 519 aa20.07■□□□□ 0.8
COL9A3-207ENST00000467819 VPS41P49754 854 aa20.07■□□□□ 0.8
COL9A3-207ENST00000467819 CDK16Q00536 496 aa20.07■□□□□ 0.8
COL9A3-207ENST00000467819 PRTGQ2VWP7 1150 aa20.07■□□□□ 0.8
COL9A3-207ENST00000467819 KLHL38Q2WGJ6 581 aa20.07■□□□□ 0.8
COL9A3-207ENST00000467819 KIAA0930Q6ICG6 404 aaPredicted RBP20.07■□□□□ 0.8
COL9A3-207ENST00000467819 FBXO42Q6P3S6 717 aa20.07■□□□□ 0.8
COL9A3-207ENST00000467819 LAPTM4BQ86VI4 370 aa20.07■□□□□ 0.8
COL9A3-207ENST00000467819 SMPDL3AQ92484 453 aa20.07■□□□□ 0.8
COL9A3-207ENST00000467819 TCF12Q99081 682 aa20.07■□□□□ 0.8
COL9A3-207ENST00000467819 AVILO75366 819 aa20.06■□□□□ 0.8
COL9A3-207ENST00000467819 VPS26AO75436 327 aa20.06■□□□□ 0.8
COL9A3-207ENST00000467819 F7P08709 466 aaPredicted RBP20.06■□□□□ 0.8
COL9A3-207ENST00000467819 PKMP14618 531 aaKnown RBP20.06■□□□□ 0.8
COL9A3-207ENST00000467819 OGNP20774 298 aaKnown RBP20.06■□□□□ 0.8
COL9A3-207ENST00000467819 MFAP5Q13361 173 aa20.06■□□□□ 0.8
COL9A3-207ENST00000467819 TLR1Q15399 786 aa20.06■□□□□ 0.8
COL9A3-207ENST00000467819 B3GNTL1Q67FW5 361 aaPredicted RBP20.06■□□□□ 0.8
COL9A3-207ENST00000467819 CASC4Q6P4E1 433 aa20.06■□□□□ 0.8
COL9A3-207ENST00000467819 CSNK1A1LQ8N752 337 aa20.06■□□□□ 0.8
COL9A3-207ENST00000467819 CATSPER1Q8NEC5 780 aa20.06■□□□□ 0.8
COL9A3-207ENST00000467819 PLCD4Q9BRC7 762 aa20.06■□□□□ 0.8
COL9A3-207ENST00000467819 TRIM56Q9BRZ2 755 aaKnown RBP20.06■□□□□ 0.8
COL9A3-207ENST00000467819 SYNPO2LQ9H987 977 aa20.06■□□□□ 0.8
COL9A3-207ENST00000467819 FAM114A2Q9NRY5 505 aa20.06■□□□□ 0.8
COL9A3-207ENST00000467819 ABCF3Q9NUQ8 709 aa20.06■□□□□ 0.8
COL9A3-207ENST00000467819 TRPC4Q9UBN4 977 aa20.06■□□□□ 0.8
COL9A3-207ENST00000467819 TAC3Q9UHF0 121 aa20.06■□□□□ 0.8
COL9A3-207ENST00000467819 OSGIN2Q9Y236 505 aa20.06■□□□□ 0.8
COL9A3-207ENST00000467819 RUVBL1Q9Y265 456 aaKnown RBP20.06■□□□□ 0.8
COL9A3-207ENST00000467819 NSG1A0A0A6YYJ2 146 aa20.05■□□□□ 0.8
COL9A3-207ENST00000467819 IGKV1-8A0A0C4DH67 115 aa20.05■□□□□ 0.8
COL9A3-207ENST00000467819 MYO1CO00159 1063 aa20.05■□□□□ 0.8
COL9A3-207ENST00000467819 CEP104O60308 925 aa20.05■□□□□ 0.8
COL9A3-207ENST00000467819 PSIP1O75475 530 aaKnown RBP20.05■□□□□ 0.8
COL9A3-207ENST00000467819 CATP04040 527 aaKnown RBP20.05■□□□□ 0.8
COL9A3-207ENST00000467819 PAMP19021 973 aa20.05■□□□□ 0.8
COL9A3-207ENST00000467819 EMP2P54851 167 aa20.05■□□□□ 0.8
COL9A3-207ENST00000467819 ADARP55265 1226 aaKnown RBP20.05■□□□□ 0.8
COL9A3-207ENST00000467819 EEF1A2Q05639 463 aaKnown RBP20.05■□□□□ 0.8
COL9A3-207ENST00000467819 KCNJ11Q14654 390 aa20.05■□□□□ 0.8
COL9A3-207ENST00000467819 HKDC1Q2TB90 917 aa20.05■□□□□ 0.8
COL9A3-207ENST00000467819 ATG9BQ674R7 924 aa20.05■□□□□ 0.8
COL9A3-207ENST00000467819 FAAH2Q6GMR7 532 aa20.05■□□□□ 0.8
COL9A3-207ENST00000467819 CENPUQ71F23 418 aa20.05■□□□□ 0.8
COL9A3-207ENST00000467819 PAQR7Q86WK9 346 aa20.05■□□□□ 0.8
COL9A3-207ENST00000467819 CILP2Q8IUL8 1156 aa20.05■□□□□ 0.8
COL9A3-207ENST00000467819 SPNS2Q8IVW8 549 aa20.05■□□□□ 0.8
COL9A3-207ENST00000467819 KBTBD2Q8IY47 623 aa20.05■□□□□ 0.8
COL9A3-207ENST00000467819 PPFIBP2Q8ND30 876 aa20.05■□□□□ 0.8
COL9A3-207ENST00000467819 FAR1Q8WVX9 515 aa20.05■□□□□ 0.8
COL9A3-207ENST00000467819 PKP4Q99569 1192 aa20.05■□□□□ 0.8
COL9A3-207ENST00000467819 CDC14AQ9UNH5 594 aa20.05■□□□□ 0.8
COL9A3-207ENST00000467819 IGLV3-12A0A075B6K2 115 aa20.04■□□□□ 0.8
COL9A3-207ENST00000467819 IDSB3KWA1 339 aa20.04■□□□□ 0.8
COL9A3-207ENST00000467819 PHF2O75151 1096 aa20.04■□□□□ 0.8
COL9A3-207ENST00000467819 UQCRHP07919 91 aa20.04■□□□□ 0.8
COL9A3-207ENST00000467819 COX6A1P12074 109 aa20.04■□□□□ 0.8
COL9A3-207ENST00000467819 CXCR5P32302 372 aa20.04■□□□□ 0.8
COL9A3-207ENST00000467819 PNLIPRP1P54315 467 aa20.04■□□□□ 0.8
COL9A3-207ENST00000467819 DSG2Q14126 1118 aa20.04■□□□□ 0.8
COL9A3-207ENST00000467819 ICE2Q659A1 982 aa20.04■□□□□ 0.8
COL9A3-207ENST00000467819 NEPROQ6NW34 567 aa20.04■□□□□ 0.8
COL9A3-207ENST00000467819 FAM180AQ6UWF9 173 aa20.04■□□□□ 0.8
COL9A3-207ENST00000467819 MMABQ96EY8 250 aaPredicted RBP20.04■□□□□ 0.8
COL9A3-207ENST00000467819 LMF1Q96S06 567 aa20.04■□□□□ 0.8
COL9A3-207ENST00000467819 SLC30A3Q99726 388 aa20.04■□□□□ 0.8
COL9A3-207ENST00000467819 PTGFRNQ9P2B2 879 aa20.04■□□□□ 0.8
COL9A3-207ENST00000467819 SCN3AQ9NY46 2000 aa20.03■□□□□ 0.8
COL9A3-207ENST00000467819 PRPF4O43172 522 aaKnown RBP eCLIP20.03■□□□□ 0.8
COL9A3-207ENST00000467819 LRRTM2O43300 516 aa20.03■□□□□ 0.8
COL9A3-207ENST00000467819 USP1O94782 785 aa20.03■□□□□ 0.8
COL9A3-207ENST00000467819 CCNDBP1O95273 360 aa20.03■□□□□ 0.8
COL9A3-207ENST00000467819 SYF2O95926 243 aaKnown RBP20.03■□□□□ 0.8
COL9A3-207ENST00000467819 PRR35P0CG20 571 aa20.03■□□□□ 0.8
COL9A3-207ENST00000467819 EDN3P14138 238 aa20.03■□□□□ 0.8
COL9A3-207ENST00000467819 CXCR2P25025 360 aa20.03■□□□□ 0.8
COL9A3-207ENST00000467819 EMP3P54852 163 aa20.03■□□□□ 0.8
COL9A3-207ENST00000467819 ARG2P78540 354 aa20.03■□□□□ 0.8
COL9A3-207ENST00000467819 SARNPP82979 210 aaKnown RBP20.03■□□□□ 0.8
COL9A3-207ENST00000467819 GPS1Q13098 491 aa20.03■□□□□ 0.8
COL9A3-207ENST00000467819 CUL1Q13616 776 aa20.03■□□□□ 0.8
COL9A3-207ENST00000467819 ARHGAP19Q14CB8 494 aa20.03■□□□□ 0.8
COL9A3-207ENST00000467819 ANKRD22Q5VYY1 191 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms