RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.41□□□□□ -0.26
BRAT1-203ENST00000467558 LOC285095A0A1B0GVY8 99 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.41□□□□□ -0.26
BRAT1-203ENST00000467558 IRGMA1A4Y4 181 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 EME2A4GXA9 379 aaPredicted RBP13.41□□□□□ -0.26
BRAT1-203ENST00000467558 FAM86C2PA6NEL3 165 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 G3V2L1 256 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 RGS10O43665 173 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 ITPKBP27987 946 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 NCBP2P52298 156 aaKnown RBP eCLIP13.41□□□□□ -0.26
BRAT1-203ENST00000467558 RPS13P62277 151 aaKnown RBP13.41□□□□□ -0.26
BRAT1-203ENST00000467558 LGALS3BPQ08380 585 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 RABL3Q5HYI8 236 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 CRTC1Q6UUV9 634 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 CROCCP3Q8IVE0 287 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 PEX5LQ8IYB4 626 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 NRSN1Q8IZ57 195 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 FAM46DQ8NEK8 389 aa13.41□□□□□ -0.26
BRAT1-203ENST00000467558 LDB2O43679 373 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 PRKD3O94806 890 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 CCNB2O95067 398 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 CA3P07451 260 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 JAK1P23458 1154 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 YAP1P46937 504 aaKnown RBP13.4□□□□□ -0.26
BRAT1-203ENST00000467558 SUZ12Q15022 739 aaKnown RBP13.4□□□□□ -0.26
BRAT1-203ENST00000467558 OR4D1Q15615 310 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 SUSD1Q6UWL2 747 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 TSPAN33Q86UF1 283 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 MRPL43Q8N983 215 aaKnown RBP13.4□□□□□ -0.26
BRAT1-203ENST00000467558 TTC29Q8NA56 475 aaPredicted RBP13.4□□□□□ -0.26
BRAT1-203ENST00000467558 CAMKVQ8NCB2 501 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 ZNF248Q8NDW4 579 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 MOCOSQ96EN8 888 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 NKX1-2Q9UD57 310 aaPredicted RBP13.4□□□□□ -0.26
BRAT1-203ENST00000467558 ACTL7AQ9Y615 435 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 RSL1D1O76021 490 aaKnown RBP13.4□□□□□ -0.26
BRAT1-203ENST00000467558 GADD45GO95257 159 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 IFNGP01579 166 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 EPCAMP16422 314 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 SLC7A9P82251 487 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 DAG1Q14118 895 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 SLC14A2Q15849 920 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 ZNF789Q5FWF6 425 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 TRIQKQ629K1 86 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 ZZZ3Q8IYH5 903 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 NAT14Q8WUY8 206 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 L3HYPDHQ96EM0 354 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 RNF38Q9H0F5 515 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 LINC00597Q9H2U6 94 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 TPT1P8Q9HAU6 139 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 TRIM39Q9HCM9 518 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 DAPK2Q9UIK4 370 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 OAZ3Q9UMX2 235 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 SMCHD1A6NHR9 2005 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 PRMT3O60678 531 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 TMED10P49755 219 aaKnown RBP13.4□□□□□ -0.26
BRAT1-203ENST00000467558 ADAM17P78536 824 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 SCARB2Q14108 478 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 ARRDC2Q8TBH0 407 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 SHDQ96IW2 340 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 TMEM74Q96NL1 305 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 REXO4Q9GZR2 422 aaKnown RBP13.4□□□□□ -0.26
BRAT1-203ENST00000467558 CRISPLD1Q9H336 500 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 IL26Q9NPH9 171 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 TREX1Q9NSU2 369 aa13.4□□□□□ -0.26
BRAT1-203ENST00000467558 KLHL33A6NCF5 533 aa13.4□□□□□ -0.27
BRAT1-203ENST00000467558 AURKAO14965 403 aa13.4□□□□□ -0.27
BRAT1-203ENST00000467558 PENKP01210 267 aaPredicted RBP13.4□□□□□ -0.27
BRAT1-203ENST00000467558 HLA-DQA2P01906 255 aa13.4□□□□□ -0.27
BRAT1-203ENST00000467558 ANXA8P13928 327 aa13.4□□□□□ -0.27
BRAT1-203ENST00000467558 PHOSPHO2Q8TCD6 241 aa13.4□□□□□ -0.27
BRAT1-203ENST00000467558 ANKRD49Q8WVL7 239 aa13.4□□□□□ -0.27
BRAT1-203ENST00000467558 FUBP1Q96AE4 644 aaKnown RBP13.4□□□□□ -0.27
BRAT1-203ENST00000467558 ANKHQ9HCJ1 492 aa13.4□□□□□ -0.27
BRAT1-203ENST00000467558 CRNNQ9UBG3 495 aaPredicted RBP13.4□□□□□ -0.27
BRAT1-203ENST00000467558 A0A1W2PP55 124 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 SMAD6O43541 496 aaKnown RBP13.39□□□□□ -0.27
BRAT1-203ENST00000467558 MPZL2O60487 215 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 SAGP10523 405 aaPredicted RBP13.39□□□□□ -0.27
BRAT1-203ENST00000467558 IL7RP16871 459 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 TAS2R50P59544 299 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 DSTNP60981 165 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 MERTKQ12866 999 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 TMC8Q8IU68 726 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 NPAS3Q8IXF0 933 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 CHST14Q8NCH0 376 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 SLC46A2Q9BY10 475 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 NEUROD4Q9HD90 331 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 DNAJC15Q9Y5T4 150 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 DGKBQ9Y6T7 804 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 ECM29Q5VYK3 1845 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 LRRC14BA6NHZ5 514 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 CHURC1-FNTBB4DL54 471 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 NDUFS4O43181 175 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 NME6O75414 186 aaPredicted RBP13.39□□□□□ -0.27
BRAT1-203ENST00000467558 TCF3P15923 654 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 ALOX12P18054 663 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 GSTM4Q03013 218 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 ZNF763Q0D2J5 394 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 GRB7Q14451 532 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms